Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01690

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01688 and MPMX20_01689 are separated by 18 nucleotidesMPMX20_01689 and MPMX20_01690 are separated by 172 nucleotidesMPMX20_01690 and MPMX20_01691 are separated by 42 nucleotidesMPMX20_01691 and MPMX20_01692 are separated by 96 nucleotides MPMX20_01688: MPMX20_01688 - putative protein YccJ, at 1,787,978 to 1,788,205 _01688 MPMX20_01689: MPMX20_01689 - NAD(P)H dehydrogenase (quinone), at 1,788,224 to 1,788,820 _01689 MPMX20_01690: MPMX20_01690 - hypothetical protein, at 1,788,993 to 1,789,169 _01690 MPMX20_01691: MPMX20_01691 - hypothetical protein, at 1,789,212 to 1,789,382 _01691 MPMX20_01692: MPMX20_01692 - hypothetical protein, at 1,789,479 to 1,790,423 _01692 Position (kb) 1788 1789 1790Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.009 kb on + strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.017 kb on - strand, within MPMX20_01688at 1788.050 kb on + strand, within MPMX20_01688at 1788.066 kb on - strand, within MPMX20_01688at 1788.088 kb on - strand, within MPMX20_01688at 1788.139 kb on + strand, within MPMX20_01688at 1788.147 kb on - strand, within MPMX20_01688at 1788.147 kb on - strand, within MPMX20_01688at 1788.147 kb on - strand, within MPMX20_01688at 1788.151 kb on + strand, within MPMX20_01688at 1788.152 kb on + strand, within MPMX20_01688at 1788.183 kb on + strandat 1788.252 kb on + strandat 1788.262 kb on + strandat 1788.266 kb on - strandat 1788.369 kb on - strand, within MPMX20_01689at 1788.430 kb on + strand, within MPMX20_01689at 1788.438 kb on - strand, within MPMX20_01689at 1788.493 kb on - strand, within MPMX20_01689at 1788.523 kb on - strand, within MPMX20_01689at 1788.555 kb on + strand, within MPMX20_01689at 1788.555 kb on + strand, within MPMX20_01689at 1788.560 kb on + strand, within MPMX20_01689at 1788.568 kb on - strand, within MPMX20_01689at 1788.586 kb on + strand, within MPMX20_01689at 1788.721 kb on + strand, within MPMX20_01689at 1788.721 kb on + strand, within MPMX20_01689at 1788.721 kb on + strand, within MPMX20_01689at 1788.721 kb on + strand, within MPMX20_01689at 1788.721 kb on + strand, within MPMX20_01689at 1788.721 kb on + strand, within MPMX20_01689at 1788.721 kb on + strand, within MPMX20_01689at 1788.729 kb on - strand, within MPMX20_01689at 1788.729 kb on - strand, within MPMX20_01689at 1788.729 kb on - strand, within MPMX20_01689at 1788.729 kb on - strand, within MPMX20_01689at 1788.759 kb on + strand, within MPMX20_01689at 1788.761 kb on - strandat 1788.771 kb on + strandat 1788.771 kb on + strandat 1788.779 kb on - strandat 1788.779 kb on - strandat 1788.779 kb on - strandat 1788.792 kb on + strandat 1788.792 kb on + strandat 1788.838 kb on - strandat 1788.861 kb on - strandat 1789.021 kb on + strand, within MPMX20_01690at 1789.058 kb on + strand, within MPMX20_01690at 1789.066 kb on + strand, within MPMX20_01690at 1789.099 kb on + strand, within MPMX20_01690at 1789.105 kb on - strand, within MPMX20_01690at 1789.107 kb on - strand, within MPMX20_01690at 1789.107 kb on - strand, within MPMX20_01690at 1789.107 kb on - strand, within MPMX20_01690at 1789.119 kb on + strand, within MPMX20_01690at 1789.119 kb on + strand, within MPMX20_01690at 1789.119 kb on + strand, within MPMX20_01690at 1789.127 kb on - strand, within MPMX20_01690at 1789.131 kb on + strand, within MPMX20_01690at 1789.135 kb on - strand, within MPMX20_01690at 1789.141 kb on - strand, within MPMX20_01690at 1789.189 kb on - strandat 1789.190 kb on - strandat 1789.197 kb on + strandat 1789.197 kb on + strandat 1789.197 kb on + strandat 1789.197 kb on + strandat 1789.204 kb on + strandat 1789.204 kb on + strandat 1789.212 kb on - strandat 1789.230 kb on + strand, within MPMX20_01691at 1789.238 kb on - strand, within MPMX20_01691at 1789.285 kb on - strand, within MPMX20_01691at 1789.387 kb on - strandat 1789.438 kb on + strandat 1789.450 kb on + strandat 1789.476 kb on - strandat 1789.573 kb on - strandat 1789.693 kb on + strand, within MPMX20_01692at 1789.709 kb on + strand, within MPMX20_01692at 1789.748 kb on + strand, within MPMX20_01692at 1789.756 kb on - strand, within MPMX20_01692at 1789.781 kb on - strand, within MPMX20_01692at 1789.817 kb on + strand, within MPMX20_01692at 1789.837 kb on - strand, within MPMX20_01692at 1789.846 kb on + strand, within MPMX20_01692at 1789.855 kb on - strand, within MPMX20_01692at 1789.859 kb on - strand, within MPMX20_01692at 1789.909 kb on + strand, within MPMX20_01692at 1789.976 kb on + strand, within MPMX20_01692at 1789.976 kb on + strand, within MPMX20_01692at 1790.026 kb on - strand, within MPMX20_01692at 1790.107 kb on - strand, within MPMX20_01692at 1790.111 kb on + strand, within MPMX20_01692

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,788,009 + MPMX20_01688 0.14 +0.8
1,788,009 + MPMX20_01688 0.14 +0.2
1,788,009 + MPMX20_01688 0.14 +0.4
1,788,009 + MPMX20_01688 0.14 -0.8
1,788,009 + MPMX20_01688 0.14 +0.1
1,788,009 + MPMX20_01688 0.14 +1.0
1,788,009 + MPMX20_01688 0.14 -1.0
1,788,009 + MPMX20_01688 0.14 -0.5
1,788,009 + MPMX20_01688 0.14 +0.8
1,788,009 + MPMX20_01688 0.14 -0.2
1,788,017 - MPMX20_01688 0.17 +0.4
1,788,017 - MPMX20_01688 0.17 +0.5
1,788,017 - MPMX20_01688 0.17 -1.8
1,788,017 - MPMX20_01688 0.17 +0.3
1,788,017 - MPMX20_01688 0.17 -1.6
1,788,017 - MPMX20_01688 0.17 +0.4
1,788,017 - MPMX20_01688 0.17 -0.1
1,788,017 - MPMX20_01688 0.17 -1.0
1,788,017 - MPMX20_01688 0.17 -1.8
1,788,017 - MPMX20_01688 0.17 -0.6
1,788,017 - MPMX20_01688 0.17 +1.1
1,788,017 - MPMX20_01688 0.17 -0.3
1,788,017 - MPMX20_01688 0.17 -0.8
1,788,017 - MPMX20_01688 0.17 -1.0
1,788,050 + MPMX20_01688 0.32 -0.7
1,788,066 - MPMX20_01688 0.39 -0.6
1,788,088 - MPMX20_01688 0.48 -1.8
1,788,139 + MPMX20_01688 0.71 +0.8
1,788,147 - MPMX20_01688 0.74 -0.5
1,788,147 - MPMX20_01688 0.74 -0.6
1,788,147 - MPMX20_01688 0.74 -0.3
1,788,151 + MPMX20_01688 0.76 +0.2
1,788,152 + MPMX20_01688 0.76 -0.8
1,788,183 + +1.8
1,788,252 + -0.2
1,788,262 + -0.4
1,788,266 - +1.3
1,788,369 - MPMX20_01689 0.24 +1.1
1,788,430 + MPMX20_01689 0.35 +0.5
1,788,438 - MPMX20_01689 0.36 -1.2
1,788,493 - MPMX20_01689 0.45 -0.6
1,788,523 - MPMX20_01689 0.50 +1.5
1,788,555 + MPMX20_01689 0.55 +0.5
1,788,555 + MPMX20_01689 0.55 -1.0
1,788,560 + MPMX20_01689 0.56 -1.3
1,788,568 - MPMX20_01689 0.58 -0.3
1,788,586 + MPMX20_01689 0.61 +0.0
1,788,721 + MPMX20_01689 0.83 -0.5
1,788,721 + MPMX20_01689 0.83 +1.6
1,788,721 + MPMX20_01689 0.83 -1.0
1,788,721 + MPMX20_01689 0.83 +2.6
1,788,721 + MPMX20_01689 0.83 -1.2
1,788,721 + MPMX20_01689 0.83 -0.0
1,788,721 + MPMX20_01689 0.83 -0.2
1,788,729 - MPMX20_01689 0.85 -1.1
1,788,729 - MPMX20_01689 0.85 +0.2
1,788,729 - MPMX20_01689 0.85 +0.8
1,788,729 - MPMX20_01689 0.85 -2.2
1,788,759 + MPMX20_01689 0.90 +1.8
1,788,761 - -1.0
1,788,771 + +0.1
1,788,771 + -0.9
1,788,779 - -2.3
1,788,779 - -1.3
1,788,779 - -1.3
1,788,792 + -1.1
1,788,792 + -0.5
1,788,838 - -0.3
1,788,861 - -0.8
1,789,021 + MPMX20_01690 0.16 +0.7
1,789,058 + MPMX20_01690 0.37 +0.6
1,789,066 + MPMX20_01690 0.41 -1.0
1,789,099 + MPMX20_01690 0.60 -0.6
1,789,105 - MPMX20_01690 0.63 -1.9
1,789,107 - MPMX20_01690 0.64 +1.0
1,789,107 - MPMX20_01690 0.64 -0.1
1,789,107 - MPMX20_01690 0.64 -0.8
1,789,119 + MPMX20_01690 0.71 +0.3
1,789,119 + MPMX20_01690 0.71 +1.4
1,789,119 + MPMX20_01690 0.71 -0.4
1,789,127 - MPMX20_01690 0.76 +0.8
1,789,131 + MPMX20_01690 0.78 +0.8
1,789,135 - MPMX20_01690 0.80 +1.1
1,789,141 - MPMX20_01690 0.84 +0.7
1,789,189 - -0.2
1,789,190 - -1.6
1,789,197 + -1.0
1,789,197 + -0.4
1,789,197 + -0.9
1,789,197 + -0.9
1,789,204 + -0.3
1,789,204 + +2.8
1,789,212 - -1.3
1,789,230 + MPMX20_01691 0.11 +0.8
1,789,238 - MPMX20_01691 0.15 -0.4
1,789,285 - MPMX20_01691 0.43 -1.5
1,789,387 - +1.8
1,789,438 + -0.0
1,789,450 + +0.0
1,789,476 - +1.6
1,789,573 - +0.5
1,789,693 + MPMX20_01692 0.23 +0.8
1,789,709 + MPMX20_01692 0.24 -0.1
1,789,748 + MPMX20_01692 0.28 -0.5
1,789,756 - MPMX20_01692 0.29 -1.8
1,789,781 - MPMX20_01692 0.32 +0.8
1,789,817 + MPMX20_01692 0.36 +0.8
1,789,837 - MPMX20_01692 0.38 +0.6
1,789,846 + MPMX20_01692 0.39 +0.3
1,789,855 - MPMX20_01692 0.40 -0.8
1,789,859 - MPMX20_01692 0.40 +0.1
1,789,909 + MPMX20_01692 0.46 -0.8
1,789,976 + MPMX20_01692 0.53 -2.5
1,789,976 + MPMX20_01692 0.53 +0.2
1,790,026 - MPMX20_01692 0.58 -0.1
1,790,107 - MPMX20_01692 0.66 -0.3
1,790,111 + MPMX20_01692 0.67 +1.4

Or see this region's nucleotide sequence