Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01342

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01341 and MPMX20_01342 are separated by 396 nucleotidesMPMX20_01342 and MPMX20_01343 are separated by 412 nucleotides MPMX20_01341: MPMX20_01341 - Potassium-transporting ATPase potassium-binding subunit, at 1,403,726 to 1,405,405 _01341 MPMX20_01342: MPMX20_01342 - hypothetical protein, at 1,405,802 to 1,406,008 _01342 MPMX20_01343: MPMX20_01343 - Deoxyribodipyrimidine photo-lyase, at 1,406,421 to 1,407,833 _01343 Position (kb) 1405 1406 1407Strain fitness (log2 ratio) -2 -1 0 1 2at 1404.809 kb on - strand, within MPMX20_01341at 1404.837 kb on + strand, within MPMX20_01341at 1404.837 kb on + strand, within MPMX20_01341at 1404.837 kb on + strand, within MPMX20_01341at 1404.845 kb on - strand, within MPMX20_01341at 1404.845 kb on - strand, within MPMX20_01341at 1404.845 kb on - strand, within MPMX20_01341at 1404.903 kb on + strand, within MPMX20_01341at 1404.911 kb on - strand, within MPMX20_01341at 1404.911 kb on - strand, within MPMX20_01341at 1404.932 kb on - strand, within MPMX20_01341at 1404.964 kb on - strand, within MPMX20_01341at 1405.011 kb on - strand, within MPMX20_01341at 1405.058 kb on - strand, within MPMX20_01341at 1405.082 kb on + strand, within MPMX20_01341at 1405.089 kb on + strand, within MPMX20_01341at 1405.089 kb on + strand, within MPMX20_01341at 1405.097 kb on - strand, within MPMX20_01341at 1405.097 kb on - strand, within MPMX20_01341at 1405.097 kb on - strand, within MPMX20_01341at 1405.097 kb on - strand, within MPMX20_01341at 1405.097 kb on - strand, within MPMX20_01341at 1405.107 kb on + strand, within MPMX20_01341at 1405.112 kb on + strand, within MPMX20_01341at 1405.310 kb on + strandat 1405.310 kb on + strandat 1405.364 kb on - strandat 1405.366 kb on + strandat 1405.426 kb on - strandat 1405.426 kb on - strandat 1405.430 kb on + strandat 1405.431 kb on - strandat 1405.438 kb on - strandat 1405.438 kb on - strandat 1405.445 kb on + strandat 1405.447 kb on - strandat 1405.453 kb on - strandat 1405.459 kb on + strandat 1405.477 kb on + strandat 1405.477 kb on + strandat 1405.477 kb on + strandat 1405.482 kb on + strandat 1405.485 kb on - strandat 1405.485 kb on - strandat 1405.485 kb on - strandat 1405.485 kb on - strandat 1405.490 kb on - strandat 1405.491 kb on + strandat 1405.496 kb on + strandat 1405.496 kb on + strandat 1405.504 kb on - strandat 1405.536 kb on + strandat 1405.794 kb on - strandat 1405.823 kb on - strand, within MPMX20_01342at 1405.871 kb on + strand, within MPMX20_01342at 1405.894 kb on - strand, within MPMX20_01342at 1405.934 kb on - strand, within MPMX20_01342at 1405.944 kb on - strand, within MPMX20_01342at 1405.972 kb on + strand, within MPMX20_01342at 1406.040 kb on + strandat 1406.086 kb on + strandat 1406.094 kb on - strandat 1406.109 kb on + strandat 1406.117 kb on - strandat 1406.143 kb on + strandat 1406.144 kb on + strandat 1406.151 kb on + strandat 1406.151 kb on + strandat 1406.159 kb on - strandat 1406.225 kb on - strandat 1406.293 kb on + strandat 1406.295 kb on - strandat 1406.326 kb on + strandat 1406.326 kb on + strandat 1406.334 kb on + strandat 1406.334 kb on - strandat 1406.342 kb on - strandat 1406.393 kb on - strandat 1406.451 kb on + strandat 1406.454 kb on - strandat 1406.497 kb on + strandat 1406.533 kb on + strandat 1406.533 kb on + strandat 1406.541 kb on - strandat 1406.570 kb on - strand, within MPMX20_01343at 1406.577 kb on + strand, within MPMX20_01343at 1406.601 kb on + strand, within MPMX20_01343at 1406.601 kb on + strand, within MPMX20_01343at 1406.601 kb on + strand, within MPMX20_01343at 1406.601 kb on + strand, within MPMX20_01343at 1406.602 kb on + strand, within MPMX20_01343at 1406.609 kb on + strand, within MPMX20_01343at 1406.672 kb on + strand, within MPMX20_01343at 1406.672 kb on + strand, within MPMX20_01343at 1406.680 kb on - strand, within MPMX20_01343at 1406.680 kb on - strand, within MPMX20_01343at 1406.680 kb on - strand, within MPMX20_01343at 1406.680 kb on - strand, within MPMX20_01343at 1406.680 kb on - strand, within MPMX20_01343at 1406.692 kb on + strand, within MPMX20_01343at 1406.692 kb on + strand, within MPMX20_01343at 1406.692 kb on + strand, within MPMX20_01343at 1406.803 kb on - strand, within MPMX20_01343at 1406.803 kb on - strand, within MPMX20_01343at 1406.811 kb on - strand, within MPMX20_01343at 1406.823 kb on - strand, within MPMX20_01343at 1406.831 kb on + strand, within MPMX20_01343at 1406.894 kb on + strand, within MPMX20_01343at 1406.902 kb on + strand, within MPMX20_01343at 1406.924 kb on - strand, within MPMX20_01343at 1406.939 kb on - strand, within MPMX20_01343at 1406.944 kb on + strand, within MPMX20_01343at 1406.948 kb on - strand, within MPMX20_01343

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,404,809 - MPMX20_01341 0.64 -0.6
1,404,837 + MPMX20_01341 0.66 +0.3
1,404,837 + MPMX20_01341 0.66 +1.1
1,404,837 + MPMX20_01341 0.66 -1.5
1,404,845 - MPMX20_01341 0.67 -0.2
1,404,845 - MPMX20_01341 0.67 +0.1
1,404,845 - MPMX20_01341 0.67 -0.8
1,404,903 + MPMX20_01341 0.70 -0.9
1,404,911 - MPMX20_01341 0.71 -0.4
1,404,911 - MPMX20_01341 0.71 +0.2
1,404,932 - MPMX20_01341 0.72 +0.1
1,404,964 - MPMX20_01341 0.74 -1.3
1,405,011 - MPMX20_01341 0.76 -1.3
1,405,058 - MPMX20_01341 0.79 -0.7
1,405,082 + MPMX20_01341 0.81 -0.2
1,405,089 + MPMX20_01341 0.81 +1.4
1,405,089 + MPMX20_01341 0.81 +0.6
1,405,097 - MPMX20_01341 0.82 +0.3
1,405,097 - MPMX20_01341 0.82 +0.8
1,405,097 - MPMX20_01341 0.82 -0.3
1,405,097 - MPMX20_01341 0.82 -0.2
1,405,097 - MPMX20_01341 0.82 -0.8
1,405,107 + MPMX20_01341 0.82 +0.4
1,405,112 + MPMX20_01341 0.82 +0.2
1,405,310 + +0.7
1,405,310 + -1.6
1,405,364 - -0.6
1,405,366 + +0.7
1,405,426 - -0.2
1,405,426 - -1.2
1,405,430 + -0.4
1,405,431 - -0.4
1,405,438 - +0.5
1,405,438 - +1.7
1,405,445 + +0.3
1,405,447 - +0.7
1,405,453 - -1.9
1,405,459 + +0.6
1,405,477 + +0.5
1,405,477 + +1.7
1,405,477 + +1.7
1,405,482 + +0.9
1,405,485 - +0.4
1,405,485 - -0.9
1,405,485 - +1.6
1,405,485 - +0.1
1,405,490 - -1.1
1,405,491 + -1.1
1,405,496 + -0.6
1,405,496 + -1.0
1,405,504 - -0.3
1,405,536 + +0.0
1,405,794 - -0.2
1,405,823 - MPMX20_01342 0.10 -0.2
1,405,871 + MPMX20_01342 0.33 -1.5
1,405,894 - MPMX20_01342 0.44 -1.5
1,405,934 - MPMX20_01342 0.64 -1.1
1,405,944 - MPMX20_01342 0.69 -0.9
1,405,972 + MPMX20_01342 0.82 +0.4
1,406,040 + +1.2
1,406,086 + +1.7
1,406,094 - -1.5
1,406,109 + -1.5
1,406,117 - -0.3
1,406,143 + -0.6
1,406,144 + -0.3
1,406,151 + -0.7
1,406,151 + -0.0
1,406,159 - +0.7
1,406,225 - -0.3
1,406,293 + -1.0
1,406,295 - +0.4
1,406,326 + -1.0
1,406,326 + +2.7
1,406,334 + -0.1
1,406,334 - +1.1
1,406,342 - -1.7
1,406,393 - -0.5
1,406,451 + +0.3
1,406,454 - +0.1
1,406,497 + +0.0
1,406,533 + -2.1
1,406,533 + +0.6
1,406,541 - -0.3
1,406,570 - MPMX20_01343 0.11 -2.3
1,406,577 + MPMX20_01343 0.11 +0.5
1,406,601 + MPMX20_01343 0.13 +0.4
1,406,601 + MPMX20_01343 0.13 -0.2
1,406,601 + MPMX20_01343 0.13 -0.2
1,406,601 + MPMX20_01343 0.13 -2.6
1,406,602 + MPMX20_01343 0.13 -0.7
1,406,609 + MPMX20_01343 0.13 -0.1
1,406,672 + MPMX20_01343 0.18 +1.1
1,406,672 + MPMX20_01343 0.18 -0.8
1,406,680 - MPMX20_01343 0.18 -0.5
1,406,680 - MPMX20_01343 0.18 +1.5
1,406,680 - MPMX20_01343 0.18 -0.3
1,406,680 - MPMX20_01343 0.18 +0.5
1,406,680 - MPMX20_01343 0.18 -1.1
1,406,692 + MPMX20_01343 0.19 -1.5
1,406,692 + MPMX20_01343 0.19 -0.4
1,406,692 + MPMX20_01343 0.19 +1.9
1,406,803 - MPMX20_01343 0.27 -2.2
1,406,803 - MPMX20_01343 0.27 -0.2
1,406,811 - MPMX20_01343 0.28 +0.9
1,406,823 - MPMX20_01343 0.28 -1.0
1,406,831 + MPMX20_01343 0.29 -1.5
1,406,894 + MPMX20_01343 0.33 -0.6
1,406,902 + MPMX20_01343 0.34 +0.8
1,406,924 - MPMX20_01343 0.36 +0.6
1,406,939 - MPMX20_01343 0.37 -0.3
1,406,944 + MPMX20_01343 0.37 -0.3
1,406,948 - MPMX20_01343 0.37 -1.1

Or see this region's nucleotide sequence