Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01341 and MPMX20_01342 are separated by 396 nucleotides MPMX20_01342 and MPMX20_01343 are separated by 412 nucleotides
MPMX20_01341: MPMX20_01341 - Potassium-transporting ATPase potassium-binding subunit, at 1,403,726 to 1,405,405
_01341
MPMX20_01342: MPMX20_01342 - hypothetical protein, at 1,405,802 to 1,406,008
_01342
MPMX20_01343: MPMX20_01343 - Deoxyribodipyrimidine photo-lyase, at 1,406,421 to 1,407,833
_01343
Position (kb)
1405
1406
1407 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1404.809 kb on - strand, within MPMX20_01341 at 1404.837 kb on + strand, within MPMX20_01341 at 1404.837 kb on + strand, within MPMX20_01341 at 1404.837 kb on + strand, within MPMX20_01341 at 1404.845 kb on - strand, within MPMX20_01341 at 1404.845 kb on - strand, within MPMX20_01341 at 1404.845 kb on - strand, within MPMX20_01341 at 1404.903 kb on + strand, within MPMX20_01341 at 1404.911 kb on - strand, within MPMX20_01341 at 1404.911 kb on - strand, within MPMX20_01341 at 1404.932 kb on - strand, within MPMX20_01341 at 1404.964 kb on - strand, within MPMX20_01341 at 1405.011 kb on - strand, within MPMX20_01341 at 1405.058 kb on - strand, within MPMX20_01341 at 1405.082 kb on + strand, within MPMX20_01341 at 1405.089 kb on + strand, within MPMX20_01341 at 1405.089 kb on + strand, within MPMX20_01341 at 1405.097 kb on - strand, within MPMX20_01341 at 1405.097 kb on - strand, within MPMX20_01341 at 1405.097 kb on - strand, within MPMX20_01341 at 1405.097 kb on - strand, within MPMX20_01341 at 1405.097 kb on - strand, within MPMX20_01341 at 1405.107 kb on + strand, within MPMX20_01341 at 1405.112 kb on + strand, within MPMX20_01341 at 1405.310 kb on + strand at 1405.310 kb on + strand at 1405.364 kb on - strand at 1405.366 kb on + strand at 1405.426 kb on - strand at 1405.426 kb on - strand at 1405.430 kb on + strand at 1405.431 kb on - strand at 1405.438 kb on - strand at 1405.438 kb on - strand at 1405.445 kb on + strand at 1405.447 kb on - strand at 1405.453 kb on - strand at 1405.459 kb on + strand at 1405.477 kb on + strand at 1405.477 kb on + strand at 1405.477 kb on + strand at 1405.482 kb on + strand at 1405.485 kb on - strand at 1405.485 kb on - strand at 1405.485 kb on - strand at 1405.485 kb on - strand at 1405.490 kb on - strand at 1405.491 kb on + strand at 1405.496 kb on + strand at 1405.496 kb on + strand at 1405.504 kb on - strand at 1405.536 kb on + strand at 1405.794 kb on - strand at 1405.823 kb on - strand, within MPMX20_01342 at 1405.871 kb on + strand, within MPMX20_01342 at 1405.894 kb on - strand, within MPMX20_01342 at 1405.934 kb on - strand, within MPMX20_01342 at 1405.944 kb on - strand, within MPMX20_01342 at 1405.972 kb on + strand, within MPMX20_01342 at 1406.040 kb on + strand at 1406.086 kb on + strand at 1406.094 kb on - strand at 1406.109 kb on + strand at 1406.117 kb on - strand at 1406.143 kb on + strand at 1406.144 kb on + strand at 1406.151 kb on + strand at 1406.151 kb on + strand at 1406.159 kb on - strand at 1406.225 kb on - strand at 1406.293 kb on + strand at 1406.295 kb on - strand at 1406.326 kb on + strand at 1406.326 kb on + strand at 1406.334 kb on + strand at 1406.334 kb on - strand at 1406.342 kb on - strand at 1406.393 kb on - strand at 1406.451 kb on + strand at 1406.454 kb on - strand at 1406.497 kb on + strand at 1406.533 kb on + strand at 1406.533 kb on + strand at 1406.541 kb on - strand at 1406.570 kb on - strand, within MPMX20_01343 at 1406.577 kb on + strand, within MPMX20_01343 at 1406.601 kb on + strand, within MPMX20_01343 at 1406.601 kb on + strand, within MPMX20_01343 at 1406.601 kb on + strand, within MPMX20_01343 at 1406.601 kb on + strand, within MPMX20_01343 at 1406.602 kb on + strand, within MPMX20_01343 at 1406.609 kb on + strand, within MPMX20_01343 at 1406.672 kb on + strand, within MPMX20_01343 at 1406.672 kb on + strand, within MPMX20_01343 at 1406.680 kb on - strand, within MPMX20_01343 at 1406.680 kb on - strand, within MPMX20_01343 at 1406.680 kb on - strand, within MPMX20_01343 at 1406.680 kb on - strand, within MPMX20_01343 at 1406.680 kb on - strand, within MPMX20_01343 at 1406.692 kb on + strand, within MPMX20_01343 at 1406.692 kb on + strand, within MPMX20_01343 at 1406.692 kb on + strand, within MPMX20_01343 at 1406.803 kb on - strand, within MPMX20_01343 at 1406.803 kb on - strand, within MPMX20_01343 at 1406.811 kb on - strand, within MPMX20_01343 at 1406.823 kb on - strand, within MPMX20_01343 at 1406.831 kb on + strand, within MPMX20_01343 at 1406.894 kb on + strand, within MPMX20_01343 at 1406.902 kb on + strand, within MPMX20_01343 at 1406.924 kb on - strand, within MPMX20_01343 at 1406.939 kb on - strand, within MPMX20_01343 at 1406.944 kb on + strand, within MPMX20_01343 at 1406.948 kb on - strand, within MPMX20_01343
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,404,809 - MPMX20_01341 0.64 -0.6 1,404,837 + MPMX20_01341 0.66 +0.3 1,404,837 + MPMX20_01341 0.66 +1.1 1,404,837 + MPMX20_01341 0.66 -1.5 1,404,845 - MPMX20_01341 0.67 -0.2 1,404,845 - MPMX20_01341 0.67 +0.1 1,404,845 - MPMX20_01341 0.67 -0.8 1,404,903 + MPMX20_01341 0.70 -0.9 1,404,911 - MPMX20_01341 0.71 -0.4 1,404,911 - MPMX20_01341 0.71 +0.2 1,404,932 - MPMX20_01341 0.72 +0.1 1,404,964 - MPMX20_01341 0.74 -1.3 1,405,011 - MPMX20_01341 0.76 -1.3 1,405,058 - MPMX20_01341 0.79 -0.7 1,405,082 + MPMX20_01341 0.81 -0.2 1,405,089 + MPMX20_01341 0.81 +1.4 1,405,089 + MPMX20_01341 0.81 +0.6 1,405,097 - MPMX20_01341 0.82 +0.3 1,405,097 - MPMX20_01341 0.82 +0.8 1,405,097 - MPMX20_01341 0.82 -0.3 1,405,097 - MPMX20_01341 0.82 -0.2 1,405,097 - MPMX20_01341 0.82 -0.8 1,405,107 + MPMX20_01341 0.82 +0.4 1,405,112 + MPMX20_01341 0.82 +0.2 1,405,310 + +0.7 1,405,310 + -1.6 1,405,364 - -0.6 1,405,366 + +0.7 1,405,426 - -0.2 1,405,426 - -1.2 1,405,430 + -0.4 1,405,431 - -0.4 1,405,438 - +0.5 1,405,438 - +1.7 1,405,445 + +0.3 1,405,447 - +0.7 1,405,453 - -1.9 1,405,459 + +0.6 1,405,477 + +0.5 1,405,477 + +1.7 1,405,477 + +1.7 1,405,482 + +0.9 1,405,485 - +0.4 1,405,485 - -0.9 1,405,485 - +1.6 1,405,485 - +0.1 1,405,490 - -1.1 1,405,491 + -1.1 1,405,496 + -0.6 1,405,496 + -1.0 1,405,504 - -0.3 1,405,536 + +0.0 1,405,794 - -0.2 1,405,823 - MPMX20_01342 0.10 -0.2 1,405,871 + MPMX20_01342 0.33 -1.5 1,405,894 - MPMX20_01342 0.44 -1.5 1,405,934 - MPMX20_01342 0.64 -1.1 1,405,944 - MPMX20_01342 0.69 -0.9 1,405,972 + MPMX20_01342 0.82 +0.4 1,406,040 + +1.2 1,406,086 + +1.7 1,406,094 - -1.5 1,406,109 + -1.5 1,406,117 - -0.3 1,406,143 + -0.6 1,406,144 + -0.3 1,406,151 + -0.7 1,406,151 + -0.0 1,406,159 - +0.7 1,406,225 - -0.3 1,406,293 + -1.0 1,406,295 - +0.4 1,406,326 + -1.0 1,406,326 + +2.7 1,406,334 + -0.1 1,406,334 - +1.1 1,406,342 - -1.7 1,406,393 - -0.5 1,406,451 + +0.3 1,406,454 - +0.1 1,406,497 + +0.0 1,406,533 + -2.1 1,406,533 + +0.6 1,406,541 - -0.3 1,406,570 - MPMX20_01343 0.11 -2.3 1,406,577 + MPMX20_01343 0.11 +0.5 1,406,601 + MPMX20_01343 0.13 +0.4 1,406,601 + MPMX20_01343 0.13 -0.2 1,406,601 + MPMX20_01343 0.13 -0.2 1,406,601 + MPMX20_01343 0.13 -2.6 1,406,602 + MPMX20_01343 0.13 -0.7 1,406,609 + MPMX20_01343 0.13 -0.1 1,406,672 + MPMX20_01343 0.18 +1.1 1,406,672 + MPMX20_01343 0.18 -0.8 1,406,680 - MPMX20_01343 0.18 -0.5 1,406,680 - MPMX20_01343 0.18 +1.5 1,406,680 - MPMX20_01343 0.18 -0.3 1,406,680 - MPMX20_01343 0.18 +0.5 1,406,680 - MPMX20_01343 0.18 -1.1 1,406,692 + MPMX20_01343 0.19 -1.5 1,406,692 + MPMX20_01343 0.19 -0.4 1,406,692 + MPMX20_01343 0.19 +1.9 1,406,803 - MPMX20_01343 0.27 -2.2 1,406,803 - MPMX20_01343 0.27 -0.2 1,406,811 - MPMX20_01343 0.28 +0.9 1,406,823 - MPMX20_01343 0.28 -1.0 1,406,831 + MPMX20_01343 0.29 -1.5 1,406,894 + MPMX20_01343 0.33 -0.6 1,406,902 + MPMX20_01343 0.34 +0.8 1,406,924 - MPMX20_01343 0.36 +0.6 1,406,939 - MPMX20_01343 0.37 -0.3 1,406,944 + MPMX20_01343 0.37 -0.3 1,406,948 - MPMX20_01343 0.37 -1.1
Or see this region's nucleotide sequence