Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01133 and MPMX20_01134 are separated by 121 nucleotides MPMX20_01134 and MPMX20_01135 overlap by 11 nucleotides MPMX20_01135 and MPMX20_01136 are separated by 190 nucleotides
MPMX20_01133: MPMX20_01133 - Oxygen-insensitive NAD(P)H nitroreductase, at 1,194,212 to 1,194,865
_01133
MPMX20_01134: MPMX20_01134 - hypothetical protein, at 1,194,987 to 1,195,355
_01134
MPMX20_01135: MPMX20_01135 - HTH-type transcriptional regulator BetI, at 1,195,345 to 1,195,935
_01135
MPMX20_01136: MPMX20_01136 - hypothetical protein, at 1,196,126 to 1,197,229
_01136
Position (kb)
1195
1196 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1194.419 kb on - strand, within MPMX20_01133 at 1194.536 kb on - strand, within MPMX20_01133 at 1194.545 kb on - strand, within MPMX20_01133 at 1194.584 kb on - strand, within MPMX20_01133 at 1194.587 kb on + strand, within MPMX20_01133 at 1194.614 kb on + strand, within MPMX20_01133 at 1194.625 kb on + strand, within MPMX20_01133 at 1194.625 kb on + strand, within MPMX20_01133 at 1194.633 kb on - strand, within MPMX20_01133 at 1194.633 kb on - strand, within MPMX20_01133 at 1194.700 kb on - strand, within MPMX20_01133 at 1194.700 kb on - strand, within MPMX20_01133 at 1194.733 kb on + strand, within MPMX20_01133 at 1194.740 kb on - strand, within MPMX20_01133 at 1194.740 kb on - strand, within MPMX20_01133 at 1194.771 kb on - strand, within MPMX20_01133 at 1194.810 kb on - strand at 1194.814 kb on + strand at 1194.831 kb on - strand at 1194.978 kb on + strand at 1195.025 kb on + strand, within MPMX20_01134 at 1195.139 kb on + strand, within MPMX20_01134 at 1195.147 kb on - strand, within MPMX20_01134 at 1195.200 kb on + strand, within MPMX20_01134 at 1195.260 kb on - strand, within MPMX20_01134 at 1195.282 kb on + strand, within MPMX20_01134 at 1195.282 kb on + strand, within MPMX20_01134 at 1195.290 kb on - strand, within MPMX20_01134 at 1195.321 kb on + strand at 1195.396 kb on + strand at 1195.594 kb on - strand, within MPMX20_01135 at 1195.666 kb on + strand, within MPMX20_01135 at 1195.698 kb on + strand, within MPMX20_01135 at 1195.698 kb on + strand, within MPMX20_01135 at 1195.706 kb on - strand, within MPMX20_01135 at 1195.706 kb on - strand, within MPMX20_01135 at 1195.706 kb on - strand, within MPMX20_01135 at 1195.818 kb on - strand, within MPMX20_01135 at 1195.847 kb on + strand, within MPMX20_01135 at 1195.859 kb on + strand, within MPMX20_01135 at 1195.863 kb on - strand, within MPMX20_01135 at 1195.863 kb on - strand, within MPMX20_01135 at 1195.867 kb on - strand, within MPMX20_01135 at 1195.937 kb on + strand at 1196.041 kb on - strand at 1196.146 kb on - strand at 1196.161 kb on - strand at 1196.161 kb on - strand at 1196.190 kb on - strand at 1196.191 kb on - strand at 1196.202 kb on + strand at 1196.229 kb on + strand at 1196.237 kb on - strand, within MPMX20_01136 at 1196.253 kb on - strand, within MPMX20_01136 at 1196.297 kb on + strand, within MPMX20_01136 at 1196.306 kb on - strand, within MPMX20_01136 at 1196.431 kb on + strand, within MPMX20_01136 at 1196.439 kb on - strand, within MPMX20_01136 at 1196.440 kb on + strand, within MPMX20_01136 at 1196.440 kb on + strand, within MPMX20_01136 at 1196.448 kb on - strand, within MPMX20_01136 at 1196.448 kb on - strand, within MPMX20_01136 at 1196.448 kb on - strand, within MPMX20_01136 at 1196.448 kb on - strand, within MPMX20_01136 at 1196.448 kb on - strand, within MPMX20_01136 at 1196.499 kb on + strand, within MPMX20_01136 at 1196.499 kb on + strand, within MPMX20_01136 at 1196.507 kb on - strand, within MPMX20_01136 at 1196.517 kb on + strand, within MPMX20_01136 at 1196.525 kb on - strand, within MPMX20_01136 at 1196.563 kb on + strand, within MPMX20_01136 at 1196.571 kb on - strand, within MPMX20_01136 at 1196.573 kb on + strand, within MPMX20_01136 at 1196.581 kb on - strand, within MPMX20_01136 at 1196.581 kb on - strand, within MPMX20_01136 at 1196.591 kb on - strand, within MPMX20_01136 at 1196.618 kb on + strand, within MPMX20_01136 at 1196.632 kb on + strand, within MPMX20_01136 at 1196.718 kb on - strand, within MPMX20_01136 at 1196.756 kb on - strand, within MPMX20_01136 at 1196.775 kb on - strand, within MPMX20_01136 at 1196.778 kb on + strand, within MPMX20_01136 at 1196.778 kb on + strand, within MPMX20_01136 at 1196.778 kb on + strand, within MPMX20_01136 at 1196.780 kb on - strand, within MPMX20_01136 at 1196.786 kb on + strand, within MPMX20_01136 at 1196.786 kb on - strand, within MPMX20_01136 at 1196.791 kb on + strand, within MPMX20_01136 at 1196.799 kb on - strand, within MPMX20_01136 at 1196.843 kb on - strand, within MPMX20_01136 at 1196.853 kb on + strand, within MPMX20_01136 at 1196.917 kb on + strand, within MPMX20_01136
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,194,419 - MPMX20_01133 0.32 -0.4 1,194,536 - MPMX20_01133 0.50 +0.6 1,194,545 - MPMX20_01133 0.51 +1.6 1,194,584 - MPMX20_01133 0.57 +1.2 1,194,587 + MPMX20_01133 0.57 +0.3 1,194,614 + MPMX20_01133 0.61 -2.1 1,194,625 + MPMX20_01133 0.63 -1.8 1,194,625 + MPMX20_01133 0.63 +0.7 1,194,633 - MPMX20_01133 0.64 +0.3 1,194,633 - MPMX20_01133 0.64 -0.9 1,194,700 - MPMX20_01133 0.75 -1.3 1,194,700 - MPMX20_01133 0.75 -0.2 1,194,733 + MPMX20_01133 0.80 -0.4 1,194,740 - MPMX20_01133 0.81 -1.0 1,194,740 - MPMX20_01133 0.81 +0.3 1,194,771 - MPMX20_01133 0.85 +0.2 1,194,810 - -1.8 1,194,814 + -0.5 1,194,831 - +0.6 1,194,978 + +0.6 1,195,025 + MPMX20_01134 0.10 -0.7 1,195,139 + MPMX20_01134 0.41 -1.8 1,195,147 - MPMX20_01134 0.43 -0.2 1,195,200 + MPMX20_01134 0.58 -0.0 1,195,260 - MPMX20_01134 0.74 +1.3 1,195,282 + MPMX20_01134 0.80 -1.2 1,195,282 + MPMX20_01134 0.80 +2.1 1,195,290 - MPMX20_01134 0.82 -0.0 1,195,321 + -0.5 1,195,396 + -0.4 1,195,594 - MPMX20_01135 0.42 -0.2 1,195,666 + MPMX20_01135 0.54 -1.9 1,195,698 + MPMX20_01135 0.60 -1.7 1,195,698 + MPMX20_01135 0.60 -1.6 1,195,706 - MPMX20_01135 0.61 -0.9 1,195,706 - MPMX20_01135 0.61 -1.6 1,195,706 - MPMX20_01135 0.61 -1.2 1,195,818 - MPMX20_01135 0.80 +0.1 1,195,847 + MPMX20_01135 0.85 +0.5 1,195,859 + MPMX20_01135 0.87 +0.6 1,195,863 - MPMX20_01135 0.88 -0.5 1,195,863 - MPMX20_01135 0.88 -1.1 1,195,867 - MPMX20_01135 0.88 -2.1 1,195,937 + -0.7 1,196,041 - -0.4 1,196,146 - -1.1 1,196,161 - +0.1 1,196,161 - -0.9 1,196,190 - +0.1 1,196,191 - +0.3 1,196,202 + +0.9 1,196,229 + +0.0 1,196,237 - MPMX20_01136 0.10 -0.5 1,196,253 - MPMX20_01136 0.12 -1.1 1,196,297 + MPMX20_01136 0.15 -0.4 1,196,306 - MPMX20_01136 0.16 +0.3 1,196,431 + MPMX20_01136 0.28 -0.8 1,196,439 - MPMX20_01136 0.28 -1.4 1,196,440 + MPMX20_01136 0.28 -2.3 1,196,440 + MPMX20_01136 0.28 -0.1 1,196,448 - MPMX20_01136 0.29 -2.6 1,196,448 - MPMX20_01136 0.29 -1.7 1,196,448 - MPMX20_01136 0.29 +0.1 1,196,448 - MPMX20_01136 0.29 +0.3 1,196,448 - MPMX20_01136 0.29 +0.1 1,196,499 + MPMX20_01136 0.34 +0.2 1,196,499 + MPMX20_01136 0.34 +0.1 1,196,507 - MPMX20_01136 0.35 +0.6 1,196,517 + MPMX20_01136 0.35 +0.3 1,196,525 - MPMX20_01136 0.36 -1.4 1,196,563 + MPMX20_01136 0.40 -0.5 1,196,571 - MPMX20_01136 0.40 -0.6 1,196,573 + MPMX20_01136 0.40 -0.9 1,196,581 - MPMX20_01136 0.41 -0.5 1,196,581 - MPMX20_01136 0.41 -0.8 1,196,591 - MPMX20_01136 0.42 -0.8 1,196,618 + MPMX20_01136 0.45 -2.5 1,196,632 + MPMX20_01136 0.46 -0.4 1,196,718 - MPMX20_01136 0.54 +0.6 1,196,756 - MPMX20_01136 0.57 -0.1 1,196,775 - MPMX20_01136 0.59 -1.5 1,196,778 + MPMX20_01136 0.59 -0.8 1,196,778 + MPMX20_01136 0.59 +0.1 1,196,778 + MPMX20_01136 0.59 +0.1 1,196,780 - MPMX20_01136 0.59 -1.9 1,196,786 + MPMX20_01136 0.60 +1.0 1,196,786 - MPMX20_01136 0.60 +0.6 1,196,791 + MPMX20_01136 0.60 -0.2 1,196,799 - MPMX20_01136 0.61 +0.3 1,196,843 - MPMX20_01136 0.65 +0.6 1,196,853 + MPMX20_01136 0.66 -0.4 1,196,917 + MPMX20_01136 0.72 +0.6
Or see this region's nucleotide sequence