Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00636

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00635 and MPMX20_00636 are separated by 9 nucleotidesMPMX20_00636 and MPMX20_00637 are separated by 21 nucleotidesMPMX20_00637 and MPMX20_00638 are separated by 9 nucleotides MPMX20_00635: MPMX20_00635 - HTH-type transcriptional activator RhaR, at 660,705 to 661,616 _00635 MPMX20_00636: MPMX20_00636 - Putative tartrate transporter, at 661,626 to 662,978 _00636 MPMX20_00637: MPMX20_00637 - 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, at 663,000 to 663,797 _00637 MPMX20_00638: MPMX20_00638 - 2-oxo-hept-4-ene-1,7-dioate hydratase, at 663,807 to 664,610 _00638 Position (kb) 661 662 663Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 660.671 kb on + strandat 660.688 kb on - strandat 660.694 kb on - strandat 660.703 kb on + strandat 660.703 kb on + strandat 660.703 kb on + strandat 660.708 kb on + strandat 660.711 kb on - strandat 660.711 kb on - strandat 660.716 kb on - strandat 660.945 kb on + strand, within MPMX20_00635at 660.973 kb on - strand, within MPMX20_00635at 660.992 kb on - strand, within MPMX20_00635at 660.994 kb on + strand, within MPMX20_00635at 660.994 kb on + strand, within MPMX20_00635at 661.002 kb on - strand, within MPMX20_00635at 661.007 kb on - strand, within MPMX20_00635at 661.018 kb on + strand, within MPMX20_00635at 661.028 kb on + strand, within MPMX20_00635at 661.036 kb on - strand, within MPMX20_00635at 661.118 kb on - strand, within MPMX20_00635at 661.118 kb on - strand, within MPMX20_00635at 661.197 kb on - strand, within MPMX20_00635at 661.202 kb on - strand, within MPMX20_00635at 661.264 kb on - strand, within MPMX20_00635at 661.264 kb on - strand, within MPMX20_00635at 661.287 kb on - strand, within MPMX20_00635at 661.287 kb on - strand, within MPMX20_00635at 661.287 kb on - strand, within MPMX20_00635at 661.314 kb on + strand, within MPMX20_00635at 661.411 kb on + strand, within MPMX20_00635at 661.414 kb on - strand, within MPMX20_00635at 661.419 kb on - strand, within MPMX20_00635at 661.423 kb on + strand, within MPMX20_00635at 661.612 kb on - strandat 661.645 kb on + strandat 661.653 kb on - strandat 661.653 kb on - strandat 661.688 kb on + strandat 661.835 kb on - strand, within MPMX20_00636at 661.882 kb on + strand, within MPMX20_00636at 661.943 kb on + strand, within MPMX20_00636at 661.951 kb on - strand, within MPMX20_00636at 661.951 kb on - strand, within MPMX20_00636at 661.961 kb on - strand, within MPMX20_00636at 661.968 kb on + strand, within MPMX20_00636at 662.027 kb on + strand, within MPMX20_00636at 662.027 kb on + strand, within MPMX20_00636at 662.056 kb on - strand, within MPMX20_00636at 662.062 kb on + strand, within MPMX20_00636at 662.074 kb on + strand, within MPMX20_00636at 662.074 kb on + strand, within MPMX20_00636at 662.082 kb on + strand, within MPMX20_00636at 662.181 kb on - strand, within MPMX20_00636at 662.206 kb on + strand, within MPMX20_00636at 662.206 kb on + strand, within MPMX20_00636at 662.206 kb on + strand, within MPMX20_00636at 662.206 kb on + strand, within MPMX20_00636at 662.206 kb on + strand, within MPMX20_00636at 662.206 kb on + strand, within MPMX20_00636at 662.206 kb on + strand, within MPMX20_00636at 662.211 kb on + strand, within MPMX20_00636at 662.214 kb on - strand, within MPMX20_00636at 662.214 kb on - strand, within MPMX20_00636at 662.219 kb on - strand, within MPMX20_00636at 662.225 kb on + strand, within MPMX20_00636at 662.234 kb on - strand, within MPMX20_00636at 662.234 kb on - strand, within MPMX20_00636at 662.234 kb on - strand, within MPMX20_00636at 662.265 kb on - strand, within MPMX20_00636at 662.348 kb on - strand, within MPMX20_00636at 662.414 kb on + strand, within MPMX20_00636at 662.465 kb on - strand, within MPMX20_00636at 662.489 kb on + strand, within MPMX20_00636at 662.489 kb on + strand, within MPMX20_00636at 662.619 kb on + strand, within MPMX20_00636at 662.664 kb on + strand, within MPMX20_00636at 662.695 kb on - strand, within MPMX20_00636at 662.767 kb on + strand, within MPMX20_00636at 662.775 kb on - strand, within MPMX20_00636at 662.777 kb on + strand, within MPMX20_00636at 662.778 kb on + strand, within MPMX20_00636at 662.789 kb on + strand, within MPMX20_00636at 662.797 kb on - strand, within MPMX20_00636at 662.931 kb on + strandat 662.939 kb on - strandat 662.939 kb on - strandat 662.949 kb on - strandat 662.963 kb on + strandat 662.963 kb on + strandat 662.963 kb on + strandat 662.971 kb on - strandat 662.971 kb on - strandat 662.977 kb on + strandat 663.036 kb on - strandat 663.073 kb on - strandat 663.073 kb on - strandat 663.073 kb on - strandat 663.086 kb on + strand, within MPMX20_00637at 663.086 kb on + strand, within MPMX20_00637at 663.094 kb on - strand, within MPMX20_00637at 663.106 kb on + strand, within MPMX20_00637at 663.114 kb on - strand, within MPMX20_00637at 663.114 kb on - strand, within MPMX20_00637at 663.125 kb on + strand, within MPMX20_00637at 663.125 kb on + strand, within MPMX20_00637at 663.133 kb on - strand, within MPMX20_00637at 663.192 kb on + strand, within MPMX20_00637at 663.192 kb on + strand, within MPMX20_00637at 663.200 kb on - strand, within MPMX20_00637at 663.255 kb on + strand, within MPMX20_00637at 663.311 kb on + strand, within MPMX20_00637at 663.319 kb on - strand, within MPMX20_00637at 663.321 kb on - strand, within MPMX20_00637at 663.365 kb on + strand, within MPMX20_00637at 663.380 kb on - strand, within MPMX20_00637at 663.419 kb on - strand, within MPMX20_00637at 663.419 kb on - strand, within MPMX20_00637at 663.466 kb on + strand, within MPMX20_00637at 663.576 kb on + strand, within MPMX20_00637at 663.640 kb on - strand, within MPMX20_00637at 663.729 kb on + strandat 663.732 kb on - strandat 663.732 kb on - strandat 663.734 kb on + strandat 663.734 kb on + strandat 663.734 kb on + strandat 663.734 kb on + strandat 663.737 kb on - strandat 663.742 kb on - strandat 663.812 kb on - strandat 663.833 kb on - strandat 663.833 kb on - strandat 663.844 kb on - strandat 663.859 kb on + strandat 663.859 kb on + strandat 663.867 kb on - strandat 663.867 kb on - strandat 663.878 kb on + strandat 663.927 kb on - strand, within MPMX20_00638at 663.932 kb on - strand, within MPMX20_00638

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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660,671 + -1.8
660,688 - +1.7
660,694 - -0.1
660,703 + +2.0
660,703 + -1.6
660,703 + -2.2
660,708 + +0.4
660,711 - -0.2
660,711 - +0.1
660,716 - +0.5
660,945 + MPMX20_00635 0.26 +0.5
660,973 - MPMX20_00635 0.29 +0.7
660,992 - MPMX20_00635 0.31 +0.8
660,994 + MPMX20_00635 0.32 -0.5
660,994 + MPMX20_00635 0.32 +1.0
661,002 - MPMX20_00635 0.33 +0.9
661,007 - MPMX20_00635 0.33 -0.6
661,018 + MPMX20_00635 0.34 +0.2
661,028 + MPMX20_00635 0.35 -1.4
661,036 - MPMX20_00635 0.36 -2.0
661,118 - MPMX20_00635 0.45 -0.4
661,118 - MPMX20_00635 0.45 -0.6
661,197 - MPMX20_00635 0.54 +0.4
661,202 - MPMX20_00635 0.54 +0.1
661,264 - MPMX20_00635 0.61 -1.0
661,264 - MPMX20_00635 0.61 -0.6
661,287 - MPMX20_00635 0.64 -1.7
661,287 - MPMX20_00635 0.64 -1.2
661,287 - MPMX20_00635 0.64 +0.4
661,314 + MPMX20_00635 0.67 +5.0
661,411 + MPMX20_00635 0.77 -0.3
661,414 - MPMX20_00635 0.78 +0.6
661,419 - MPMX20_00635 0.78 +0.4
661,423 + MPMX20_00635 0.79 -0.4
661,612 - -0.1
661,645 + -0.5
661,653 - +2.4
661,653 - +0.0
661,688 + -0.3
661,835 - MPMX20_00636 0.15 +1.4
661,882 + MPMX20_00636 0.19 +0.2
661,943 + MPMX20_00636 0.23 -1.3
661,951 - MPMX20_00636 0.24 -1.1
661,951 - MPMX20_00636 0.24 +1.0
661,961 - MPMX20_00636 0.25 -0.2
661,968 + MPMX20_00636 0.25 +0.1
662,027 + MPMX20_00636 0.30 +1.4
662,027 + MPMX20_00636 0.30 +0.8
662,056 - MPMX20_00636 0.32 -0.1
662,062 + MPMX20_00636 0.32 -0.7
662,074 + MPMX20_00636 0.33 +0.4
662,074 + MPMX20_00636 0.33 -0.0
662,082 + MPMX20_00636 0.34 -0.1
662,181 - MPMX20_00636 0.41 -1.4
662,206 + MPMX20_00636 0.43 -0.1
662,206 + MPMX20_00636 0.43 +0.9
662,206 + MPMX20_00636 0.43 +1.4
662,206 + MPMX20_00636 0.43 -0.2
662,206 + MPMX20_00636 0.43 +0.2
662,206 + MPMX20_00636 0.43 -0.6
662,206 + MPMX20_00636 0.43 +0.6
662,211 + MPMX20_00636 0.43 +0.2
662,214 - MPMX20_00636 0.43 +2.1
662,214 - MPMX20_00636 0.43 -1.4
662,219 - MPMX20_00636 0.44 +0.3
662,225 + MPMX20_00636 0.44 +0.4
662,234 - MPMX20_00636 0.45 +0.9
662,234 - MPMX20_00636 0.45 -0.9
662,234 - MPMX20_00636 0.45 +1.1
662,265 - MPMX20_00636 0.47 -0.1
662,348 - MPMX20_00636 0.53 +0.2
662,414 + MPMX20_00636 0.58 -0.6
662,465 - MPMX20_00636 0.62 +1.4
662,489 + MPMX20_00636 0.64 +3.0
662,489 + MPMX20_00636 0.64 +0.6
662,619 + MPMX20_00636 0.73 +1.4
662,664 + MPMX20_00636 0.77 -0.2
662,695 - MPMX20_00636 0.79 -0.3
662,767 + MPMX20_00636 0.84 -0.1
662,775 - MPMX20_00636 0.85 +1.4
662,777 + MPMX20_00636 0.85 -2.3
662,778 + MPMX20_00636 0.85 +0.4
662,789 + MPMX20_00636 0.86 +0.4
662,797 - MPMX20_00636 0.87 -1.5
662,931 + +1.0
662,939 - +1.4
662,939 - -0.2
662,949 - -1.0
662,963 + -0.2
662,963 + +0.0
662,963 + -0.5
662,971 - -0.4
662,971 - -0.2
662,977 + +0.3
663,036 - +0.1
663,073 - -0.3
663,073 - +0.4
663,073 - -0.6
663,086 + MPMX20_00637 0.11 +0.8
663,086 + MPMX20_00637 0.11 +0.4
663,094 - MPMX20_00637 0.12 -3.2
663,106 + MPMX20_00637 0.13 +0.3
663,114 - MPMX20_00637 0.14 -0.9
663,114 - MPMX20_00637 0.14 -0.7
663,125 + MPMX20_00637 0.16 -1.1
663,125 + MPMX20_00637 0.16 -1.7
663,133 - MPMX20_00637 0.17 -0.8
663,192 + MPMX20_00637 0.24 -1.4
663,192 + MPMX20_00637 0.24 -0.1
663,200 - MPMX20_00637 0.25 -0.2
663,255 + MPMX20_00637 0.32 -0.5
663,311 + MPMX20_00637 0.39 -0.6
663,319 - MPMX20_00637 0.40 +0.1
663,321 - MPMX20_00637 0.40 +2.3
663,365 + MPMX20_00637 0.46 -1.2
663,380 - MPMX20_00637 0.48 -1.1
663,419 - MPMX20_00637 0.53 -0.7
663,419 - MPMX20_00637 0.53 -0.1
663,466 + MPMX20_00637 0.58 -0.2
663,576 + MPMX20_00637 0.72 +0.4
663,640 - MPMX20_00637 0.80 -1.7
663,729 + -1.9
663,732 - -0.2
663,732 - +1.8
663,734 + +1.4
663,734 + -0.5
663,734 + -0.0
663,734 + -0.9
663,737 - -0.6
663,742 - -2.2
663,812 - -0.7
663,833 - -0.8
663,833 - +1.4
663,844 - +0.8
663,859 + -0.9
663,859 + -2.5
663,867 - -1.1
663,867 - -1.1
663,878 + +0.8
663,927 - MPMX20_00638 0.15 +0.4
663,932 - MPMX20_00638 0.16 +0.5

Or see this region's nucleotide sequence