Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00599

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00598 and MPMX20_00599 are separated by 185 nucleotidesMPMX20_00599 and MPMX20_00600 are separated by 45 nucleotides MPMX20_00598: MPMX20_00598 - HTH-type transcriptional regulator DegA, at 625,034 to 626,041 _00598 MPMX20_00599: MPMX20_00599 - hypothetical protein, at 626,227 to 627,315 _00599 MPMX20_00600: MPMX20_00600 - Melibiose carrier protein, at 627,361 to 628,755 _00600 Position (kb) 626 627 628Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 625.301 kb on + strand, within MPMX20_00598at 625.367 kb on + strand, within MPMX20_00598at 625.402 kb on - strand, within MPMX20_00598at 625.408 kb on + strand, within MPMX20_00598at 625.408 kb on + strand, within MPMX20_00598at 625.416 kb on - strand, within MPMX20_00598at 625.416 kb on - strand, within MPMX20_00598at 625.416 kb on - strand, within MPMX20_00598at 625.472 kb on + strand, within MPMX20_00598at 625.508 kb on + strand, within MPMX20_00598at 625.510 kb on - strand, within MPMX20_00598at 625.519 kb on + strand, within MPMX20_00598at 625.519 kb on + strand, within MPMX20_00598at 625.519 kb on + strand, within MPMX20_00598at 625.519 kb on + strand, within MPMX20_00598at 625.527 kb on - strand, within MPMX20_00598at 625.527 kb on - strand, within MPMX20_00598at 625.651 kb on + strand, within MPMX20_00598at 625.717 kb on + strand, within MPMX20_00598at 625.724 kb on - strand, within MPMX20_00598at 625.736 kb on + strand, within MPMX20_00598at 625.736 kb on + strand, within MPMX20_00598at 625.744 kb on - strand, within MPMX20_00598at 625.780 kb on - strand, within MPMX20_00598at 625.807 kb on + strand, within MPMX20_00598at 625.807 kb on + strand, within MPMX20_00598at 625.815 kb on - strand, within MPMX20_00598at 625.815 kb on - strand, within MPMX20_00598at 625.822 kb on - strand, within MPMX20_00598at 625.957 kb on + strandat 625.992 kb on + strandat 626.002 kb on + strandat 626.047 kb on - strandat 626.068 kb on + strandat 626.072 kb on + strandat 626.074 kb on + strandat 626.082 kb on - strandat 626.130 kb on - strandat 626.166 kb on - strandat 626.171 kb on - strandat 626.230 kb on + strandat 626.259 kb on + strandat 626.267 kb on - strandat 626.300 kb on + strandat 626.341 kb on + strand, within MPMX20_00599at 626.341 kb on + strand, within MPMX20_00599at 626.349 kb on - strand, within MPMX20_00599at 626.377 kb on - strand, within MPMX20_00599at 626.379 kb on + strand, within MPMX20_00599at 626.382 kb on - strand, within MPMX20_00599at 626.398 kb on + strand, within MPMX20_00599at 626.398 kb on + strand, within MPMX20_00599at 626.402 kb on + strand, within MPMX20_00599at 626.406 kb on - strand, within MPMX20_00599at 626.406 kb on - strand, within MPMX20_00599at 626.408 kb on - strand, within MPMX20_00599at 626.410 kb on - strand, within MPMX20_00599at 626.410 kb on - strand, within MPMX20_00599at 626.510 kb on + strand, within MPMX20_00599at 626.523 kb on - strand, within MPMX20_00599at 626.619 kb on - strand, within MPMX20_00599at 626.726 kb on - strand, within MPMX20_00599at 626.768 kb on + strand, within MPMX20_00599at 626.779 kb on + strand, within MPMX20_00599at 626.779 kb on + strand, within MPMX20_00599at 626.805 kb on - strand, within MPMX20_00599at 626.805 kb on - strand, within MPMX20_00599at 626.861 kb on - strand, within MPMX20_00599at 626.865 kb on + strand, within MPMX20_00599at 626.962 kb on + strand, within MPMX20_00599at 626.963 kb on - strand, within MPMX20_00599at 626.984 kb on - strand, within MPMX20_00599at 626.988 kb on + strand, within MPMX20_00599at 627.050 kb on - strand, within MPMX20_00599at 627.050 kb on - strand, within MPMX20_00599at 627.080 kb on + strand, within MPMX20_00599at 627.102 kb on + strand, within MPMX20_00599at 627.102 kb on + strand, within MPMX20_00599at 627.159 kb on + strand, within MPMX20_00599at 627.192 kb on + strand, within MPMX20_00599at 627.200 kb on - strand, within MPMX20_00599at 627.201 kb on + strand, within MPMX20_00599at 627.202 kb on - strand, within MPMX20_00599at 627.209 kb on - strandat 627.216 kb on + strandat 627.224 kb on - strandat 627.227 kb on + strandat 627.235 kb on - strandat 627.248 kb on - strandat 627.270 kb on - strandat 627.285 kb on + strandat 627.285 kb on + strandat 627.285 kb on + strandat 627.293 kb on - strandat 627.293 kb on - strandat 627.324 kb on + strandat 627.359 kb on - strandat 627.359 kb on - strandat 627.365 kb on - strandat 627.365 kb on - strandat 627.369 kb on - strandat 627.414 kb on + strandat 627.416 kb on + strandat 627.421 kb on + strandat 627.423 kb on - strandat 627.424 kb on - strandat 627.424 kb on - strandat 627.436 kb on - strandat 627.448 kb on - strandat 627.563 kb on + strand, within MPMX20_00600at 627.646 kb on - strand, within MPMX20_00600at 627.648 kb on + strand, within MPMX20_00600at 627.707 kb on + strand, within MPMX20_00600at 627.707 kb on + strand, within MPMX20_00600at 627.719 kb on + strand, within MPMX20_00600at 627.719 kb on + strand, within MPMX20_00600at 627.727 kb on + strand, within MPMX20_00600at 627.727 kb on - strand, within MPMX20_00600at 627.734 kb on - strand, within MPMX20_00600at 627.745 kb on + strand, within MPMX20_00600at 627.782 kb on + strand, within MPMX20_00600at 627.790 kb on - strand, within MPMX20_00600at 627.790 kb on - strand, within MPMX20_00600at 627.848 kb on + strand, within MPMX20_00600at 627.962 kb on + strand, within MPMX20_00600at 627.962 kb on + strand, within MPMX20_00600at 627.970 kb on - strand, within MPMX20_00600at 627.970 kb on - strand, within MPMX20_00600at 627.979 kb on - strand, within MPMX20_00600at 628.025 kb on + strand, within MPMX20_00600at 628.033 kb on - strand, within MPMX20_00600at 628.033 kb on - strand, within MPMX20_00600at 628.053 kb on + strand, within MPMX20_00600at 628.084 kb on + strand, within MPMX20_00600at 628.199 kb on - strand, within MPMX20_00600at 628.213 kb on - strand, within MPMX20_00600at 628.223 kb on + strand, within MPMX20_00600at 628.250 kb on - strand, within MPMX20_00600at 628.298 kb on + strand, within MPMX20_00600at 628.306 kb on - strand, within MPMX20_00600

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_126 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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625,301 + MPMX20_00598 0.26 -0.5
625,367 + MPMX20_00598 0.33 -1.8
625,402 - MPMX20_00598 0.37 -1.5
625,408 + MPMX20_00598 0.37 -0.8
625,408 + MPMX20_00598 0.37 -1.2
625,416 - MPMX20_00598 0.38 -1.1
625,416 - MPMX20_00598 0.38 -2.4
625,416 - MPMX20_00598 0.38 -0.2
625,472 + MPMX20_00598 0.43 +0.5
625,508 + MPMX20_00598 0.47 +0.4
625,510 - MPMX20_00598 0.47 +0.4
625,519 + MPMX20_00598 0.48 +0.1
625,519 + MPMX20_00598 0.48 +0.1
625,519 + MPMX20_00598 0.48 -0.9
625,519 + MPMX20_00598 0.48 -0.3
625,527 - MPMX20_00598 0.49 +0.6
625,527 - MPMX20_00598 0.49 +0.4
625,651 + MPMX20_00598 0.61 -0.8
625,717 + MPMX20_00598 0.68 -0.9
625,724 - MPMX20_00598 0.68 -0.4
625,736 + MPMX20_00598 0.70 +1.0
625,736 + MPMX20_00598 0.70 -0.3
625,744 - MPMX20_00598 0.70 -1.4
625,780 - MPMX20_00598 0.74 +0.2
625,807 + MPMX20_00598 0.77 +0.8
625,807 + MPMX20_00598 0.77 +0.4
625,815 - MPMX20_00598 0.77 -0.0
625,815 - MPMX20_00598 0.77 -0.2
625,822 - MPMX20_00598 0.78 -0.2
625,957 + -0.8
625,992 + -1.1
626,002 + -0.1
626,047 - +0.2
626,068 + -0.4
626,072 + +0.3
626,074 + +0.2
626,082 - +1.1
626,130 - -0.5
626,166 - +0.0
626,171 - +1.7
626,230 + -0.1
626,259 + +0.4
626,267 - +0.4
626,300 + -0.7
626,341 + MPMX20_00599 0.10 -0.5
626,341 + MPMX20_00599 0.10 -1.4
626,349 - MPMX20_00599 0.11 -0.3
626,377 - MPMX20_00599 0.14 +0.4
626,379 + MPMX20_00599 0.14 -0.2
626,382 - MPMX20_00599 0.14 +0.4
626,398 + MPMX20_00599 0.16 +0.3
626,398 + MPMX20_00599 0.16 -1.6
626,402 + MPMX20_00599 0.16 -0.7
626,406 - MPMX20_00599 0.16 +1.7
626,406 - MPMX20_00599 0.16 -1.9
626,408 - MPMX20_00599 0.17 +0.3
626,410 - MPMX20_00599 0.17 -0.3
626,410 - MPMX20_00599 0.17 -0.2
626,510 + MPMX20_00599 0.26 -0.2
626,523 - MPMX20_00599 0.27 -1.4
626,619 - MPMX20_00599 0.36 -0.0
626,726 - MPMX20_00599 0.46 -1.3
626,768 + MPMX20_00599 0.50 +1.4
626,779 + MPMX20_00599 0.51 +1.4
626,779 + MPMX20_00599 0.51 -1.8
626,805 - MPMX20_00599 0.53 -0.4
626,805 - MPMX20_00599 0.53 -0.3
626,861 - MPMX20_00599 0.58 +0.6
626,865 + MPMX20_00599 0.59 +0.9
626,962 + MPMX20_00599 0.67 +0.2
626,963 - MPMX20_00599 0.68 +0.8
626,984 - MPMX20_00599 0.70 -0.2
626,988 + MPMX20_00599 0.70 -1.9
627,050 - MPMX20_00599 0.76 +0.5
627,050 - MPMX20_00599 0.76 +0.8
627,080 + MPMX20_00599 0.78 -0.1
627,102 + MPMX20_00599 0.80 -0.2
627,102 + MPMX20_00599 0.80 +1.1
627,159 + MPMX20_00599 0.86 +0.4
627,192 + MPMX20_00599 0.89 -0.2
627,200 - MPMX20_00599 0.89 +4.2
627,201 + MPMX20_00599 0.89 +0.3
627,202 - MPMX20_00599 0.90 -1.4
627,209 - -0.6
627,216 + -1.4
627,224 - +1.7
627,227 + -2.3
627,235 - -0.9
627,248 - -1.4
627,270 - -1.5
627,285 + +0.5
627,285 + -1.2
627,285 + +1.8
627,293 - -1.1
627,293 - +0.5
627,324 + +0.5
627,359 - +0.4
627,359 - +0.7
627,365 - -0.2
627,365 - -0.4
627,369 - -0.0
627,414 + -0.7
627,416 + -0.6
627,421 + -0.3
627,423 - -2.1
627,424 - -0.4
627,424 - -0.2
627,436 - -1.4
627,448 - -0.2
627,563 + MPMX20_00600 0.14 -0.2
627,646 - MPMX20_00600 0.20 -0.4
627,648 + MPMX20_00600 0.21 +0.1
627,707 + MPMX20_00600 0.25 -0.4
627,707 + MPMX20_00600 0.25 -1.6
627,719 + MPMX20_00600 0.26 -0.6
627,719 + MPMX20_00600 0.26 +0.1
627,727 + MPMX20_00600 0.26 +0.8
627,727 - MPMX20_00600 0.26 -1.1
627,734 - MPMX20_00600 0.27 +1.4
627,745 + MPMX20_00600 0.28 -1.4
627,782 + MPMX20_00600 0.30 -1.3
627,790 - MPMX20_00600 0.31 -0.1
627,790 - MPMX20_00600 0.31 +0.6
627,848 + MPMX20_00600 0.35 -0.8
627,962 + MPMX20_00600 0.43 +1.6
627,962 + MPMX20_00600 0.43 +0.1
627,970 - MPMX20_00600 0.44 +1.0
627,970 - MPMX20_00600 0.44 -0.4
627,979 - MPMX20_00600 0.44 -0.0
628,025 + MPMX20_00600 0.48 -0.6
628,033 - MPMX20_00600 0.48 -2.2
628,033 - MPMX20_00600 0.48 +1.3
628,053 + MPMX20_00600 0.50 -0.6
628,084 + MPMX20_00600 0.52 -0.4
628,199 - MPMX20_00600 0.60 +0.1
628,213 - MPMX20_00600 0.61 +0.4
628,223 + MPMX20_00600 0.62 -1.6
628,250 - MPMX20_00600 0.64 +1.1
628,298 + MPMX20_00600 0.67 -1.2
628,306 - MPMX20_00600 0.68 +0.4

Or see this region's nucleotide sequence