Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03283 and MPMX20_03284 are separated by 185 nucleotides MPMX20_03284 and MPMX20_03285 are separated by 127 nucleotides MPMX20_03285 and MPMX20_03286 are separated by 61 nucleotides
MPMX20_03283: MPMX20_03283 - Indole-3-pyruvate decarboxylase, at 3,455,153 to 3,456,811
_03283
MPMX20_03284: MPMX20_03284 - L-glyceraldehyde 3-phosphate reductase, at 3,456,997 to 3,457,995
_03284
MPMX20_03285: MPMX20_03285 - hypothetical protein, at 3,458,123 to 3,458,470
_03285
MPMX20_03286: MPMX20_03286 - Divalent metal cation transporter MntH, at 3,458,532 to 3,459,770
_03286
Position (kb)
3456
3457
3458 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3456.007 kb on + strand, within MPMX20_03283 at 3456.015 kb on - strand, within MPMX20_03283 at 3456.025 kb on - strand, within MPMX20_03283 at 3456.034 kb on - strand, within MPMX20_03283 at 3456.070 kb on - strand, within MPMX20_03283 at 3456.127 kb on - strand, within MPMX20_03283 at 3456.134 kb on + strand, within MPMX20_03283 at 3456.223 kb on + strand, within MPMX20_03283 at 3456.231 kb on - strand, within MPMX20_03283 at 3456.243 kb on + strand, within MPMX20_03283 at 3456.253 kb on + strand, within MPMX20_03283 at 3456.356 kb on - strand, within MPMX20_03283 at 3456.368 kb on - strand, within MPMX20_03283 at 3456.456 kb on - strand, within MPMX20_03283 at 3456.480 kb on + strand, within MPMX20_03283 at 3456.483 kb on - strand, within MPMX20_03283 at 3456.553 kb on - strand, within MPMX20_03283 at 3456.658 kb on + strand at 3456.663 kb on - strand at 3456.692 kb on + strand at 3456.713 kb on + strand at 3456.726 kb on - strand at 3456.771 kb on - strand at 3456.771 kb on - strand at 3456.771 kb on - strand at 3456.795 kb on + strand at 3456.804 kb on - strand at 3456.817 kb on - strand at 3456.955 kb on + strand at 3456.979 kb on + strand at 3457.209 kb on - strand, within MPMX20_03284 at 3457.283 kb on - strand, within MPMX20_03284 at 3457.290 kb on + strand, within MPMX20_03284 at 3457.298 kb on - strand, within MPMX20_03284 at 3457.298 kb on - strand, within MPMX20_03284 at 3457.311 kb on + strand, within MPMX20_03284 at 3457.337 kb on + strand, within MPMX20_03284 at 3457.372 kb on - strand, within MPMX20_03284 at 3457.388 kb on - strand, within MPMX20_03284 at 3457.434 kb on + strand, within MPMX20_03284 at 3457.442 kb on + strand, within MPMX20_03284 at 3457.462 kb on + strand, within MPMX20_03284 at 3457.474 kb on + strand, within MPMX20_03284 at 3457.513 kb on + strand, within MPMX20_03284 at 3457.521 kb on - strand, within MPMX20_03284 at 3457.548 kb on + strand, within MPMX20_03284 at 3457.590 kb on + strand, within MPMX20_03284 at 3457.598 kb on - strand, within MPMX20_03284 at 3457.748 kb on + strand, within MPMX20_03284 at 3457.748 kb on + strand, within MPMX20_03284 at 3457.850 kb on - strand, within MPMX20_03284 at 3457.871 kb on + strand, within MPMX20_03284 at 3457.871 kb on + strand, within MPMX20_03284 at 3457.881 kb on + strand, within MPMX20_03284 at 3457.975 kb on + strand at 3457.975 kb on + strand at 3457.983 kb on - strand at 3457.985 kb on + strand at 3457.985 kb on + strand at 3458.119 kb on + strand at 3458.385 kb on - strand, within MPMX20_03285 at 3458.441 kb on + strand at 3458.450 kb on + strand at 3458.538 kb on + strand at 3458.543 kb on + strand at 3458.546 kb on - strand at 3458.546 kb on - strand at 3458.546 kb on - strand at 3458.548 kb on + strand at 3458.625 kb on + strand at 3458.625 kb on + strand at 3458.625 kb on + strand at 3458.625 kb on + strand at 3458.689 kb on - strand, within MPMX20_03286 at 3458.739 kb on + strand, within MPMX20_03286 at 3458.794 kb on + strand, within MPMX20_03286 at 3458.824 kb on - strand, within MPMX20_03286 at 3458.861 kb on - strand, within MPMX20_03286 at 3458.869 kb on - strand, within MPMX20_03286 at 3458.936 kb on + strand, within MPMX20_03286 at 3458.941 kb on + strand, within MPMX20_03286 at 3458.943 kb on - strand, within MPMX20_03286
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,456,007 + MPMX20_03283 0.51 +0.2 3,456,015 - MPMX20_03283 0.52 -2.0 3,456,025 - MPMX20_03283 0.53 -1.5 3,456,034 - MPMX20_03283 0.53 -0.9 3,456,070 - MPMX20_03283 0.55 +2.1 3,456,127 - MPMX20_03283 0.59 +1.5 3,456,134 + MPMX20_03283 0.59 +2.2 3,456,223 + MPMX20_03283 0.64 -0.3 3,456,231 - MPMX20_03283 0.65 +1.5 3,456,243 + MPMX20_03283 0.66 -1.5 3,456,253 + MPMX20_03283 0.66 +0.9 3,456,356 - MPMX20_03283 0.73 -0.5 3,456,368 - MPMX20_03283 0.73 -1.6 3,456,456 - MPMX20_03283 0.79 +1.4 3,456,480 + MPMX20_03283 0.80 -0.3 3,456,483 - MPMX20_03283 0.80 -0.2 3,456,553 - MPMX20_03283 0.84 -0.2 3,456,658 + +0.5 3,456,663 - +0.9 3,456,692 + -0.9 3,456,713 + -0.3 3,456,726 - -0.1 3,456,771 - -0.6 3,456,771 - +1.0 3,456,771 - +0.0 3,456,795 + -0.7 3,456,804 - -0.3 3,456,817 - -0.3 3,456,955 + -1.5 3,456,979 + +2.5 3,457,209 - MPMX20_03284 0.21 +0.2 3,457,283 - MPMX20_03284 0.29 -0.7 3,457,290 + MPMX20_03284 0.29 -1.4 3,457,298 - MPMX20_03284 0.30 -1.1 3,457,298 - MPMX20_03284 0.30 -0.7 3,457,311 + MPMX20_03284 0.31 +1.5 3,457,337 + MPMX20_03284 0.34 +0.9 3,457,372 - MPMX20_03284 0.38 -0.3 3,457,388 - MPMX20_03284 0.39 -0.1 3,457,434 + MPMX20_03284 0.44 -1.8 3,457,442 + MPMX20_03284 0.45 -0.3 3,457,462 + MPMX20_03284 0.47 -0.6 3,457,474 + MPMX20_03284 0.48 -0.2 3,457,513 + MPMX20_03284 0.52 +0.9 3,457,521 - MPMX20_03284 0.52 -0.3 3,457,548 + MPMX20_03284 0.55 +0.9 3,457,590 + MPMX20_03284 0.59 +0.5 3,457,598 - MPMX20_03284 0.60 +0.2 3,457,748 + MPMX20_03284 0.75 +0.3 3,457,748 + MPMX20_03284 0.75 +1.1 3,457,850 - MPMX20_03284 0.85 +0.9 3,457,871 + MPMX20_03284 0.87 -0.5 3,457,871 + MPMX20_03284 0.87 -0.4 3,457,881 + MPMX20_03284 0.88 +0.7 3,457,975 + +2.5 3,457,975 + -0.1 3,457,983 - +0.6 3,457,985 + -0.5 3,457,985 + -0.2 3,458,119 + +0.3 3,458,385 - MPMX20_03285 0.75 -1.7 3,458,441 + -0.7 3,458,450 + +0.7 3,458,538 + -1.2 3,458,543 + -0.9 3,458,546 - -0.9 3,458,546 - +1.5 3,458,546 - -0.4 3,458,548 + +0.5 3,458,625 + -0.4 3,458,625 + +0.2 3,458,625 + +0.8 3,458,625 + -0.5 3,458,689 - MPMX20_03286 0.13 -2.0 3,458,739 + MPMX20_03286 0.17 -0.8 3,458,794 + MPMX20_03286 0.21 -0.4 3,458,824 - MPMX20_03286 0.24 +0.3 3,458,861 - MPMX20_03286 0.27 -1.0 3,458,869 - MPMX20_03286 0.27 -0.4 3,458,936 + MPMX20_03286 0.33 -1.7 3,458,941 + MPMX20_03286 0.33 +1.3 3,458,943 - MPMX20_03286 0.33 -1.3
Or see this region's nucleotide sequence