Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03284

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03283 and MPMX20_03284 are separated by 185 nucleotidesMPMX20_03284 and MPMX20_03285 are separated by 127 nucleotidesMPMX20_03285 and MPMX20_03286 are separated by 61 nucleotides MPMX20_03283: MPMX20_03283 - Indole-3-pyruvate decarboxylase, at 3,455,153 to 3,456,811 _03283 MPMX20_03284: MPMX20_03284 - L-glyceraldehyde 3-phosphate reductase, at 3,456,997 to 3,457,995 _03284 MPMX20_03285: MPMX20_03285 - hypothetical protein, at 3,458,123 to 3,458,470 _03285 MPMX20_03286: MPMX20_03286 - Divalent metal cation transporter MntH, at 3,458,532 to 3,459,770 _03286 Position (kb) 3456 3457 3458Strain fitness (log2 ratio) -2 -1 0 1 2at 3456.007 kb on + strand, within MPMX20_03283at 3456.015 kb on - strand, within MPMX20_03283at 3456.025 kb on - strand, within MPMX20_03283at 3456.034 kb on - strand, within MPMX20_03283at 3456.070 kb on - strand, within MPMX20_03283at 3456.127 kb on - strand, within MPMX20_03283at 3456.134 kb on + strand, within MPMX20_03283at 3456.223 kb on + strand, within MPMX20_03283at 3456.231 kb on - strand, within MPMX20_03283at 3456.243 kb on + strand, within MPMX20_03283at 3456.253 kb on + strand, within MPMX20_03283at 3456.356 kb on - strand, within MPMX20_03283at 3456.368 kb on - strand, within MPMX20_03283at 3456.456 kb on - strand, within MPMX20_03283at 3456.480 kb on + strand, within MPMX20_03283at 3456.483 kb on - strand, within MPMX20_03283at 3456.553 kb on - strand, within MPMX20_03283at 3456.658 kb on + strandat 3456.663 kb on - strandat 3456.692 kb on + strandat 3456.713 kb on + strandat 3456.726 kb on - strandat 3456.771 kb on - strandat 3456.771 kb on - strandat 3456.771 kb on - strandat 3456.795 kb on + strandat 3456.804 kb on - strandat 3456.817 kb on - strandat 3456.955 kb on + strandat 3456.979 kb on + strandat 3457.209 kb on - strand, within MPMX20_03284at 3457.283 kb on - strand, within MPMX20_03284at 3457.290 kb on + strand, within MPMX20_03284at 3457.298 kb on - strand, within MPMX20_03284at 3457.298 kb on - strand, within MPMX20_03284at 3457.311 kb on + strand, within MPMX20_03284at 3457.337 kb on + strand, within MPMX20_03284at 3457.372 kb on - strand, within MPMX20_03284at 3457.388 kb on - strand, within MPMX20_03284at 3457.434 kb on + strand, within MPMX20_03284at 3457.442 kb on + strand, within MPMX20_03284at 3457.462 kb on + strand, within MPMX20_03284at 3457.474 kb on + strand, within MPMX20_03284at 3457.513 kb on + strand, within MPMX20_03284at 3457.521 kb on - strand, within MPMX20_03284at 3457.548 kb on + strand, within MPMX20_03284at 3457.590 kb on + strand, within MPMX20_03284at 3457.598 kb on - strand, within MPMX20_03284at 3457.748 kb on + strand, within MPMX20_03284at 3457.748 kb on + strand, within MPMX20_03284at 3457.850 kb on - strand, within MPMX20_03284at 3457.871 kb on + strand, within MPMX20_03284at 3457.871 kb on + strand, within MPMX20_03284at 3457.881 kb on + strand, within MPMX20_03284at 3457.975 kb on + strandat 3457.975 kb on + strandat 3457.983 kb on - strandat 3457.985 kb on + strandat 3457.985 kb on + strandat 3458.119 kb on + strandat 3458.385 kb on - strand, within MPMX20_03285at 3458.441 kb on + strandat 3458.450 kb on + strandat 3458.538 kb on + strandat 3458.543 kb on + strandat 3458.546 kb on - strandat 3458.546 kb on - strandat 3458.546 kb on - strandat 3458.548 kb on + strandat 3458.625 kb on + strandat 3458.625 kb on + strandat 3458.625 kb on + strandat 3458.625 kb on + strandat 3458.689 kb on - strand, within MPMX20_03286at 3458.739 kb on + strand, within MPMX20_03286at 3458.794 kb on + strand, within MPMX20_03286at 3458.824 kb on - strand, within MPMX20_03286at 3458.861 kb on - strand, within MPMX20_03286at 3458.869 kb on - strand, within MPMX20_03286at 3458.936 kb on + strand, within MPMX20_03286at 3458.941 kb on + strand, within MPMX20_03286at 3458.943 kb on - strand, within MPMX20_03286

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,456,007 + MPMX20_03283 0.51 +0.2
3,456,015 - MPMX20_03283 0.52 -2.0
3,456,025 - MPMX20_03283 0.53 -1.5
3,456,034 - MPMX20_03283 0.53 -0.9
3,456,070 - MPMX20_03283 0.55 +2.1
3,456,127 - MPMX20_03283 0.59 +1.5
3,456,134 + MPMX20_03283 0.59 +2.2
3,456,223 + MPMX20_03283 0.64 -0.3
3,456,231 - MPMX20_03283 0.65 +1.5
3,456,243 + MPMX20_03283 0.66 -1.5
3,456,253 + MPMX20_03283 0.66 +0.9
3,456,356 - MPMX20_03283 0.73 -0.5
3,456,368 - MPMX20_03283 0.73 -1.6
3,456,456 - MPMX20_03283 0.79 +1.4
3,456,480 + MPMX20_03283 0.80 -0.3
3,456,483 - MPMX20_03283 0.80 -0.2
3,456,553 - MPMX20_03283 0.84 -0.2
3,456,658 + +0.5
3,456,663 - +0.9
3,456,692 + -0.9
3,456,713 + -0.3
3,456,726 - -0.1
3,456,771 - -0.6
3,456,771 - +1.0
3,456,771 - +0.0
3,456,795 + -0.7
3,456,804 - -0.3
3,456,817 - -0.3
3,456,955 + -1.5
3,456,979 + +2.5
3,457,209 - MPMX20_03284 0.21 +0.2
3,457,283 - MPMX20_03284 0.29 -0.7
3,457,290 + MPMX20_03284 0.29 -1.4
3,457,298 - MPMX20_03284 0.30 -1.1
3,457,298 - MPMX20_03284 0.30 -0.7
3,457,311 + MPMX20_03284 0.31 +1.5
3,457,337 + MPMX20_03284 0.34 +0.9
3,457,372 - MPMX20_03284 0.38 -0.3
3,457,388 - MPMX20_03284 0.39 -0.1
3,457,434 + MPMX20_03284 0.44 -1.8
3,457,442 + MPMX20_03284 0.45 -0.3
3,457,462 + MPMX20_03284 0.47 -0.6
3,457,474 + MPMX20_03284 0.48 -0.2
3,457,513 + MPMX20_03284 0.52 +0.9
3,457,521 - MPMX20_03284 0.52 -0.3
3,457,548 + MPMX20_03284 0.55 +0.9
3,457,590 + MPMX20_03284 0.59 +0.5
3,457,598 - MPMX20_03284 0.60 +0.2
3,457,748 + MPMX20_03284 0.75 +0.3
3,457,748 + MPMX20_03284 0.75 +1.1
3,457,850 - MPMX20_03284 0.85 +0.9
3,457,871 + MPMX20_03284 0.87 -0.5
3,457,871 + MPMX20_03284 0.87 -0.4
3,457,881 + MPMX20_03284 0.88 +0.7
3,457,975 + +2.5
3,457,975 + -0.1
3,457,983 - +0.6
3,457,985 + -0.5
3,457,985 + -0.2
3,458,119 + +0.3
3,458,385 - MPMX20_03285 0.75 -1.7
3,458,441 + -0.7
3,458,450 + +0.7
3,458,538 + -1.2
3,458,543 + -0.9
3,458,546 - -0.9
3,458,546 - +1.5
3,458,546 - -0.4
3,458,548 + +0.5
3,458,625 + -0.4
3,458,625 + +0.2
3,458,625 + +0.8
3,458,625 + -0.5
3,458,689 - MPMX20_03286 0.13 -2.0
3,458,739 + MPMX20_03286 0.17 -0.8
3,458,794 + MPMX20_03286 0.21 -0.4
3,458,824 - MPMX20_03286 0.24 +0.3
3,458,861 - MPMX20_03286 0.27 -1.0
3,458,869 - MPMX20_03286 0.27 -0.4
3,458,936 + MPMX20_03286 0.33 -1.7
3,458,941 + MPMX20_03286 0.33 +1.3
3,458,943 - MPMX20_03286 0.33 -1.3

Or see this region's nucleotide sequence