Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02985 and MPMX20_02986 are separated by 191 nucleotides MPMX20_02986 and MPMX20_02987 are separated by 73 nucleotides
MPMX20_02985: MPMX20_02985 - putative L,D-transpeptidase ErfK/SrfK, at 3,117,408 to 3,118,307
_02985
MPMX20_02986: MPMX20_02986 - Fosfomycin resistance protein AbaF, at 3,118,499 to 3,119,815
_02986
MPMX20_02987: MPMX20_02987 - AMP nucleosidase, at 3,119,889 to 3,121,343
_02987
Position (kb)
3118
3119
3120 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.620 kb on + strand, within MPMX20_02985 at 3117.620 kb on + strand, within MPMX20_02985 at 3117.623 kb on + strand, within MPMX20_02985 at 3117.623 kb on + strand, within MPMX20_02985 at 3117.628 kb on - strand, within MPMX20_02985 at 3117.628 kb on - strand, within MPMX20_02985 at 3117.628 kb on - strand, within MPMX20_02985 at 3117.631 kb on - strand, within MPMX20_02985 at 3117.631 kb on - strand, within MPMX20_02985 at 3117.631 kb on - strand, within MPMX20_02985 at 3117.634 kb on - strand, within MPMX20_02985 at 3117.637 kb on + strand, within MPMX20_02985 at 3117.637 kb on + strand, within MPMX20_02985 at 3117.637 kb on + strand, within MPMX20_02985 at 3117.680 kb on + strand, within MPMX20_02985 at 3117.680 kb on + strand, within MPMX20_02985 at 3117.680 kb on + strand, within MPMX20_02985 at 3117.688 kb on - strand, within MPMX20_02985 at 3117.688 kb on - strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.698 kb on - strand, within MPMX20_02985 at 3117.698 kb on - strand, within MPMX20_02985 at 3117.698 kb on - strand, within MPMX20_02985 at 3117.698 kb on - strand, within MPMX20_02985 at 3117.771 kb on - strand, within MPMX20_02985 at 3117.813 kb on - strand, within MPMX20_02985 at 3117.825 kb on - strand, within MPMX20_02985 at 3117.827 kb on + strand, within MPMX20_02985 at 3117.875 kb on - strand, within MPMX20_02985 at 3117.903 kb on - strand, within MPMX20_02985 at 3117.916 kb on + strand, within MPMX20_02985 at 3117.953 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.984 kb on - strand, within MPMX20_02985 at 3118.055 kb on + strand, within MPMX20_02985 at 3118.122 kb on + strand, within MPMX20_02985 at 3118.122 kb on + strand, within MPMX20_02985 at 3118.130 kb on - strand, within MPMX20_02985 at 3118.171 kb on - strand, within MPMX20_02985 at 3118.184 kb on + strand, within MPMX20_02985 at 3118.184 kb on + strand, within MPMX20_02985 at 3118.192 kb on - strand, within MPMX20_02985 at 3118.242 kb on - strand at 3118.242 kb on - strand at 3118.247 kb on + strand at 3118.292 kb on + strand at 3118.315 kb on + strand at 3118.319 kb on + strand at 3118.341 kb on + strand at 3118.349 kb on - strand at 3118.349 kb on - strand at 3118.349 kb on - strand at 3118.349 kb on - strand at 3118.362 kb on - strand at 3118.406 kb on - strand at 3118.410 kb on + strand at 3118.419 kb on + strand at 3118.419 kb on - strand at 3118.441 kb on + strand at 3118.453 kb on + strand at 3118.489 kb on + strand at 3118.491 kb on + strand at 3118.497 kb on - strand at 3118.504 kb on - strand at 3118.504 kb on - strand at 3118.504 kb on - strand at 3118.515 kb on + strand at 3118.515 kb on + strand at 3118.515 kb on + strand at 3118.516 kb on - strand at 3118.523 kb on - strand at 3118.523 kb on - strand at 3118.568 kb on + strand at 3118.576 kb on - strand at 3118.610 kb on - strand at 3118.738 kb on - strand, within MPMX20_02986 at 3118.748 kb on - strand, within MPMX20_02986 at 3118.882 kb on + strand, within MPMX20_02986 at 3118.906 kb on - strand, within MPMX20_02986 at 3118.906 kb on - strand, within MPMX20_02986 at 3118.935 kb on - strand, within MPMX20_02986 at 3119.010 kb on + strand, within MPMX20_02986 at 3119.132 kb on + strand, within MPMX20_02986 at 3119.170 kb on + strand, within MPMX20_02986 at 3119.307 kb on - strand, within MPMX20_02986 at 3119.401 kb on + strand, within MPMX20_02986 at 3119.407 kb on + strand, within MPMX20_02986 at 3119.415 kb on - strand, within MPMX20_02986 at 3119.433 kb on + strand, within MPMX20_02986 at 3119.433 kb on + strand, within MPMX20_02986 at 3119.433 kb on + strand, within MPMX20_02986 at 3119.441 kb on - strand, within MPMX20_02986 at 3119.554 kb on + strand, within MPMX20_02986 at 3119.573 kb on + strand, within MPMX20_02986 at 3119.619 kb on - strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.642 kb on + strand, within MPMX20_02986 at 3119.650 kb on - strand, within MPMX20_02986 at 3119.669 kb on - strand, within MPMX20_02986 at 3119.736 kb on + strand at 3119.744 kb on - strand at 3119.901 kb on + strand at 3119.912 kb on + strand at 3119.912 kb on + strand at 3119.946 kb on + strand at 3119.955 kb on - strand at 3120.023 kb on + strand at 3120.031 kb on - strand at 3120.154 kb on + strand, within MPMX20_02987 at 3120.159 kb on + strand, within MPMX20_02987 at 3120.162 kb on - strand, within MPMX20_02987 at 3120.162 kb on - strand, within MPMX20_02987 at 3120.183 kb on + strand, within MPMX20_02987 at 3120.206 kb on + strand, within MPMX20_02987 at 3120.206 kb on + strand, within MPMX20_02987 at 3120.206 kb on + strand, within MPMX20_02987 at 3120.214 kb on - strand, within MPMX20_02987 at 3120.214 kb on - strand, within MPMX20_02987 at 3120.214 kb on - strand, within MPMX20_02987 at 3120.274 kb on + strand, within MPMX20_02987 at 3120.286 kb on + strand, within MPMX20_02987 at 3120.286 kb on + strand, within MPMX20_02987 at 3120.484 kb on + strand, within MPMX20_02987 at 3120.495 kb on - strand, within MPMX20_02987 at 3120.551 kb on - strand, within MPMX20_02987 at 3120.566 kb on + strand, within MPMX20_02987 at 3120.581 kb on + strand, within MPMX20_02987 at 3120.581 kb on + strand, within MPMX20_02987 at 3120.632 kb on + strand, within MPMX20_02987 at 3120.645 kb on - strand, within MPMX20_02987 at 3120.813 kb on - strand, within MPMX20_02987
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,117,563 + MPMX20_02985 0.17 +0.8 3,117,563 + MPMX20_02985 0.17 +0.5 3,117,563 + MPMX20_02985 0.17 +0.7 3,117,563 + MPMX20_02985 0.17 -2.3 3,117,563 + MPMX20_02985 0.17 +1.2 3,117,563 + MPMX20_02985 0.17 -1.4 3,117,563 + MPMX20_02985 0.17 +0.2 3,117,571 - MPMX20_02985 0.18 -0.4 3,117,571 - MPMX20_02985 0.18 -1.6 3,117,571 - MPMX20_02985 0.18 +0.5 3,117,571 - MPMX20_02985 0.18 -1.2 3,117,571 - MPMX20_02985 0.18 -2.7 3,117,620 + MPMX20_02985 0.24 -0.8 3,117,620 + MPMX20_02985 0.24 -0.3 3,117,623 + MPMX20_02985 0.24 -0.5 3,117,623 + MPMX20_02985 0.24 +2.1 3,117,628 - MPMX20_02985 0.24 +0.3 3,117,628 - MPMX20_02985 0.24 +0.4 3,117,628 - MPMX20_02985 0.24 +0.2 3,117,631 - MPMX20_02985 0.25 +1.5 3,117,631 - MPMX20_02985 0.25 -0.8 3,117,631 - MPMX20_02985 0.25 -0.4 3,117,634 - MPMX20_02985 0.25 -0.0 3,117,637 + MPMX20_02985 0.25 +1.7 3,117,637 + MPMX20_02985 0.25 +0.1 3,117,637 + MPMX20_02985 0.25 +0.7 3,117,680 + MPMX20_02985 0.30 +0.2 3,117,680 + MPMX20_02985 0.30 -0.3 3,117,680 + MPMX20_02985 0.30 +1.0 3,117,688 - MPMX20_02985 0.31 -0.5 3,117,688 - MPMX20_02985 0.31 -0.0 3,117,690 + MPMX20_02985 0.31 -0.2 3,117,690 + MPMX20_02985 0.31 -0.6 3,117,690 + MPMX20_02985 0.31 +1.3 3,117,690 + MPMX20_02985 0.31 -1.0 3,117,690 + MPMX20_02985 0.31 -0.5 3,117,698 - MPMX20_02985 0.32 -0.2 3,117,698 - MPMX20_02985 0.32 +0.1 3,117,698 - MPMX20_02985 0.32 +1.2 3,117,698 - MPMX20_02985 0.32 -0.3 3,117,771 - MPMX20_02985 0.40 +0.4 3,117,813 - MPMX20_02985 0.45 +0.6 3,117,825 - MPMX20_02985 0.46 -0.5 3,117,827 + MPMX20_02985 0.47 +1.0 3,117,875 - MPMX20_02985 0.52 -0.0 3,117,903 - MPMX20_02985 0.55 +1.5 3,117,916 + MPMX20_02985 0.56 +0.5 3,117,953 - MPMX20_02985 0.61 +0.5 3,117,959 - MPMX20_02985 0.61 -0.6 3,117,959 - MPMX20_02985 0.61 -1.4 3,117,959 - MPMX20_02985 0.61 +0.3 3,117,959 - MPMX20_02985 0.61 +0.9 3,117,959 - MPMX20_02985 0.61 -1.0 3,117,959 - MPMX20_02985 0.61 +1.0 3,117,959 - MPMX20_02985 0.61 -0.4 3,117,959 - MPMX20_02985 0.61 +2.0 3,117,984 - MPMX20_02985 0.64 +0.2 3,118,055 + MPMX20_02985 0.72 +0.5 3,118,122 + MPMX20_02985 0.79 +0.7 3,118,122 + MPMX20_02985 0.79 -1.1 3,118,130 - MPMX20_02985 0.80 -1.3 3,118,171 - MPMX20_02985 0.85 +0.3 3,118,184 + MPMX20_02985 0.86 +1.5 3,118,184 + MPMX20_02985 0.86 -0.7 3,118,192 - MPMX20_02985 0.87 +0.5 3,118,242 - -0.3 3,118,242 - -1.4 3,118,247 + +0.5 3,118,292 + +0.9 3,118,315 + -1.5 3,118,319 + -1.2 3,118,341 + -0.7 3,118,349 - +1.5 3,118,349 - -1.8 3,118,349 - -0.2 3,118,349 - +0.1 3,118,362 - -0.1 3,118,406 - -0.3 3,118,410 + -2.8 3,118,419 + -0.6 3,118,419 - +0.3 3,118,441 + +1.5 3,118,453 + +1.3 3,118,489 + +0.9 3,118,491 + -0.8 3,118,497 - +0.5 3,118,504 - -0.5 3,118,504 - +0.8 3,118,504 - -1.0 3,118,515 + +0.2 3,118,515 + +1.4 3,118,515 + -0.5 3,118,516 - -0.9 3,118,523 - +0.4 3,118,523 - -0.1 3,118,568 + -1.1 3,118,576 - +1.1 3,118,610 - -0.3 3,118,738 - MPMX20_02986 0.18 -2.1 3,118,748 - MPMX20_02986 0.19 -1.2 3,118,882 + MPMX20_02986 0.29 +0.4 3,118,906 - MPMX20_02986 0.31 -0.3 3,118,906 - MPMX20_02986 0.31 +1.5 3,118,935 - MPMX20_02986 0.33 -0.7 3,119,010 + MPMX20_02986 0.39 +1.5 3,119,132 + MPMX20_02986 0.48 +0.2 3,119,170 + MPMX20_02986 0.51 +0.1 3,119,307 - MPMX20_02986 0.61 -1.9 3,119,401 + MPMX20_02986 0.68 +0.4 3,119,407 + MPMX20_02986 0.69 -2.3 3,119,415 - MPMX20_02986 0.70 -0.5 3,119,433 + MPMX20_02986 0.71 -0.1 3,119,433 + MPMX20_02986 0.71 +0.8 3,119,433 + MPMX20_02986 0.71 +3.5 3,119,441 - MPMX20_02986 0.72 -1.9 3,119,554 + MPMX20_02986 0.80 -1.2 3,119,573 + MPMX20_02986 0.82 -0.4 3,119,619 - MPMX20_02986 0.85 -0.8 3,119,642 + MPMX20_02986 0.87 +1.8 3,119,642 + MPMX20_02986 0.87 -1.2 3,119,642 + MPMX20_02986 0.87 +0.2 3,119,642 + MPMX20_02986 0.87 -1.1 3,119,642 + MPMX20_02986 0.87 -2.5 3,119,650 - MPMX20_02986 0.87 +0.1 3,119,669 - MPMX20_02986 0.89 -0.2 3,119,736 + -0.4 3,119,744 - -1.0 3,119,901 + +1.9 3,119,912 + -1.3 3,119,912 + +0.2 3,119,946 + +0.2 3,119,955 - +0.2 3,120,023 + -0.8 3,120,031 - +0.5 3,120,154 + MPMX20_02987 0.18 +2.1 3,120,159 + MPMX20_02987 0.19 -0.2 3,120,162 - MPMX20_02987 0.19 +0.8 3,120,162 - MPMX20_02987 0.19 +0.8 3,120,183 + MPMX20_02987 0.20 +0.7 3,120,206 + MPMX20_02987 0.22 -0.1 3,120,206 + MPMX20_02987 0.22 -0.6 3,120,206 + MPMX20_02987 0.22 -0.1 3,120,214 - MPMX20_02987 0.22 -0.3 3,120,214 - MPMX20_02987 0.22 +1.3 3,120,214 - MPMX20_02987 0.22 +1.9 3,120,274 + MPMX20_02987 0.26 -0.4 3,120,286 + MPMX20_02987 0.27 +0.5 3,120,286 + MPMX20_02987 0.27 -1.4 3,120,484 + MPMX20_02987 0.41 +1.4 3,120,495 - MPMX20_02987 0.42 -1.2 3,120,551 - MPMX20_02987 0.45 +0.4 3,120,566 + MPMX20_02987 0.47 -0.9 3,120,581 + MPMX20_02987 0.48 +2.4 3,120,581 + MPMX20_02987 0.48 +1.4 3,120,632 + MPMX20_02987 0.51 -0.5 3,120,645 - MPMX20_02987 0.52 -0.5 3,120,813 - MPMX20_02987 0.64 +3.1
Or see this region's nucleotide sequence