Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02986

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02985 and MPMX20_02986 are separated by 191 nucleotidesMPMX20_02986 and MPMX20_02987 are separated by 73 nucleotides MPMX20_02985: MPMX20_02985 - putative L,D-transpeptidase ErfK/SrfK, at 3,117,408 to 3,118,307 _02985 MPMX20_02986: MPMX20_02986 - Fosfomycin resistance protein AbaF, at 3,118,499 to 3,119,815 _02986 MPMX20_02987: MPMX20_02987 - AMP nucleosidase, at 3,119,889 to 3,121,343 _02987 Position (kb) 3118 3119 3120Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.620 kb on + strand, within MPMX20_02985at 3117.620 kb on + strand, within MPMX20_02985at 3117.623 kb on + strand, within MPMX20_02985at 3117.623 kb on + strand, within MPMX20_02985at 3117.628 kb on - strand, within MPMX20_02985at 3117.628 kb on - strand, within MPMX20_02985at 3117.628 kb on - strand, within MPMX20_02985at 3117.631 kb on - strand, within MPMX20_02985at 3117.631 kb on - strand, within MPMX20_02985at 3117.631 kb on - strand, within MPMX20_02985at 3117.634 kb on - strand, within MPMX20_02985at 3117.637 kb on + strand, within MPMX20_02985at 3117.637 kb on + strand, within MPMX20_02985at 3117.637 kb on + strand, within MPMX20_02985at 3117.680 kb on + strand, within MPMX20_02985at 3117.680 kb on + strand, within MPMX20_02985at 3117.680 kb on + strand, within MPMX20_02985at 3117.688 kb on - strand, within MPMX20_02985at 3117.688 kb on - strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.698 kb on - strand, within MPMX20_02985at 3117.698 kb on - strand, within MPMX20_02985at 3117.698 kb on - strand, within MPMX20_02985at 3117.698 kb on - strand, within MPMX20_02985at 3117.771 kb on - strand, within MPMX20_02985at 3117.813 kb on - strand, within MPMX20_02985at 3117.825 kb on - strand, within MPMX20_02985at 3117.827 kb on + strand, within MPMX20_02985at 3117.875 kb on - strand, within MPMX20_02985at 3117.903 kb on - strand, within MPMX20_02985at 3117.916 kb on + strand, within MPMX20_02985at 3117.953 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.984 kb on - strand, within MPMX20_02985at 3118.055 kb on + strand, within MPMX20_02985at 3118.122 kb on + strand, within MPMX20_02985at 3118.122 kb on + strand, within MPMX20_02985at 3118.130 kb on - strand, within MPMX20_02985at 3118.171 kb on - strand, within MPMX20_02985at 3118.184 kb on + strand, within MPMX20_02985at 3118.184 kb on + strand, within MPMX20_02985at 3118.192 kb on - strand, within MPMX20_02985at 3118.242 kb on - strandat 3118.242 kb on - strandat 3118.247 kb on + strandat 3118.292 kb on + strandat 3118.315 kb on + strandat 3118.319 kb on + strandat 3118.341 kb on + strandat 3118.349 kb on - strandat 3118.349 kb on - strandat 3118.349 kb on - strandat 3118.349 kb on - strandat 3118.362 kb on - strandat 3118.406 kb on - strandat 3118.410 kb on + strandat 3118.419 kb on + strandat 3118.419 kb on - strandat 3118.441 kb on + strandat 3118.453 kb on + strandat 3118.489 kb on + strandat 3118.491 kb on + strandat 3118.497 kb on - strandat 3118.504 kb on - strandat 3118.504 kb on - strandat 3118.504 kb on - strandat 3118.515 kb on + strandat 3118.515 kb on + strandat 3118.515 kb on + strandat 3118.516 kb on - strandat 3118.523 kb on - strandat 3118.523 kb on - strandat 3118.568 kb on + strandat 3118.576 kb on - strandat 3118.610 kb on - strandat 3118.738 kb on - strand, within MPMX20_02986at 3118.748 kb on - strand, within MPMX20_02986at 3118.882 kb on + strand, within MPMX20_02986at 3118.906 kb on - strand, within MPMX20_02986at 3118.906 kb on - strand, within MPMX20_02986at 3118.935 kb on - strand, within MPMX20_02986at 3119.010 kb on + strand, within MPMX20_02986at 3119.132 kb on + strand, within MPMX20_02986at 3119.170 kb on + strand, within MPMX20_02986at 3119.307 kb on - strand, within MPMX20_02986at 3119.401 kb on + strand, within MPMX20_02986at 3119.407 kb on + strand, within MPMX20_02986at 3119.415 kb on - strand, within MPMX20_02986at 3119.433 kb on + strand, within MPMX20_02986at 3119.433 kb on + strand, within MPMX20_02986at 3119.433 kb on + strand, within MPMX20_02986at 3119.441 kb on - strand, within MPMX20_02986at 3119.554 kb on + strand, within MPMX20_02986at 3119.573 kb on + strand, within MPMX20_02986at 3119.619 kb on - strand, within MPMX20_02986at 3119.642 kb on + strand, within MPMX20_02986at 3119.642 kb on + strand, within MPMX20_02986at 3119.642 kb on + strand, within MPMX20_02986at 3119.642 kb on + strand, within MPMX20_02986at 3119.642 kb on + strand, within MPMX20_02986at 3119.650 kb on - strand, within MPMX20_02986at 3119.669 kb on - strand, within MPMX20_02986at 3119.736 kb on + strandat 3119.744 kb on - strandat 3119.901 kb on + strandat 3119.912 kb on + strandat 3119.912 kb on + strandat 3119.946 kb on + strandat 3119.955 kb on - strandat 3120.023 kb on + strandat 3120.031 kb on - strandat 3120.154 kb on + strand, within MPMX20_02987at 3120.159 kb on + strand, within MPMX20_02987at 3120.162 kb on - strand, within MPMX20_02987at 3120.162 kb on - strand, within MPMX20_02987at 3120.183 kb on + strand, within MPMX20_02987at 3120.206 kb on + strand, within MPMX20_02987at 3120.206 kb on + strand, within MPMX20_02987at 3120.206 kb on + strand, within MPMX20_02987at 3120.214 kb on - strand, within MPMX20_02987at 3120.214 kb on - strand, within MPMX20_02987at 3120.214 kb on - strand, within MPMX20_02987at 3120.274 kb on + strand, within MPMX20_02987at 3120.286 kb on + strand, within MPMX20_02987at 3120.286 kb on + strand, within MPMX20_02987at 3120.484 kb on + strand, within MPMX20_02987at 3120.495 kb on - strand, within MPMX20_02987at 3120.551 kb on - strand, within MPMX20_02987at 3120.566 kb on + strand, within MPMX20_02987at 3120.581 kb on + strand, within MPMX20_02987at 3120.581 kb on + strand, within MPMX20_02987at 3120.632 kb on + strand, within MPMX20_02987at 3120.645 kb on - strand, within MPMX20_02987at 3120.813 kb on - strand, within MPMX20_02987

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,117,563 + MPMX20_02985 0.17 +0.8
3,117,563 + MPMX20_02985 0.17 +0.5
3,117,563 + MPMX20_02985 0.17 +0.7
3,117,563 + MPMX20_02985 0.17 -2.3
3,117,563 + MPMX20_02985 0.17 +1.2
3,117,563 + MPMX20_02985 0.17 -1.4
3,117,563 + MPMX20_02985 0.17 +0.2
3,117,571 - MPMX20_02985 0.18 -0.4
3,117,571 - MPMX20_02985 0.18 -1.6
3,117,571 - MPMX20_02985 0.18 +0.5
3,117,571 - MPMX20_02985 0.18 -1.2
3,117,571 - MPMX20_02985 0.18 -2.7
3,117,620 + MPMX20_02985 0.24 -0.8
3,117,620 + MPMX20_02985 0.24 -0.3
3,117,623 + MPMX20_02985 0.24 -0.5
3,117,623 + MPMX20_02985 0.24 +2.1
3,117,628 - MPMX20_02985 0.24 +0.3
3,117,628 - MPMX20_02985 0.24 +0.4
3,117,628 - MPMX20_02985 0.24 +0.2
3,117,631 - MPMX20_02985 0.25 +1.5
3,117,631 - MPMX20_02985 0.25 -0.8
3,117,631 - MPMX20_02985 0.25 -0.4
3,117,634 - MPMX20_02985 0.25 -0.0
3,117,637 + MPMX20_02985 0.25 +1.7
3,117,637 + MPMX20_02985 0.25 +0.1
3,117,637 + MPMX20_02985 0.25 +0.7
3,117,680 + MPMX20_02985 0.30 +0.2
3,117,680 + MPMX20_02985 0.30 -0.3
3,117,680 + MPMX20_02985 0.30 +1.0
3,117,688 - MPMX20_02985 0.31 -0.5
3,117,688 - MPMX20_02985 0.31 -0.0
3,117,690 + MPMX20_02985 0.31 -0.2
3,117,690 + MPMX20_02985 0.31 -0.6
3,117,690 + MPMX20_02985 0.31 +1.3
3,117,690 + MPMX20_02985 0.31 -1.0
3,117,690 + MPMX20_02985 0.31 -0.5
3,117,698 - MPMX20_02985 0.32 -0.2
3,117,698 - MPMX20_02985 0.32 +0.1
3,117,698 - MPMX20_02985 0.32 +1.2
3,117,698 - MPMX20_02985 0.32 -0.3
3,117,771 - MPMX20_02985 0.40 +0.4
3,117,813 - MPMX20_02985 0.45 +0.6
3,117,825 - MPMX20_02985 0.46 -0.5
3,117,827 + MPMX20_02985 0.47 +1.0
3,117,875 - MPMX20_02985 0.52 -0.0
3,117,903 - MPMX20_02985 0.55 +1.5
3,117,916 + MPMX20_02985 0.56 +0.5
3,117,953 - MPMX20_02985 0.61 +0.5
3,117,959 - MPMX20_02985 0.61 -0.6
3,117,959 - MPMX20_02985 0.61 -1.4
3,117,959 - MPMX20_02985 0.61 +0.3
3,117,959 - MPMX20_02985 0.61 +0.9
3,117,959 - MPMX20_02985 0.61 -1.0
3,117,959 - MPMX20_02985 0.61 +1.0
3,117,959 - MPMX20_02985 0.61 -0.4
3,117,959 - MPMX20_02985 0.61 +2.0
3,117,984 - MPMX20_02985 0.64 +0.2
3,118,055 + MPMX20_02985 0.72 +0.5
3,118,122 + MPMX20_02985 0.79 +0.7
3,118,122 + MPMX20_02985 0.79 -1.1
3,118,130 - MPMX20_02985 0.80 -1.3
3,118,171 - MPMX20_02985 0.85 +0.3
3,118,184 + MPMX20_02985 0.86 +1.5
3,118,184 + MPMX20_02985 0.86 -0.7
3,118,192 - MPMX20_02985 0.87 +0.5
3,118,242 - -0.3
3,118,242 - -1.4
3,118,247 + +0.5
3,118,292 + +0.9
3,118,315 + -1.5
3,118,319 + -1.2
3,118,341 + -0.7
3,118,349 - +1.5
3,118,349 - -1.8
3,118,349 - -0.2
3,118,349 - +0.1
3,118,362 - -0.1
3,118,406 - -0.3
3,118,410 + -2.8
3,118,419 + -0.6
3,118,419 - +0.3
3,118,441 + +1.5
3,118,453 + +1.3
3,118,489 + +0.9
3,118,491 + -0.8
3,118,497 - +0.5
3,118,504 - -0.5
3,118,504 - +0.8
3,118,504 - -1.0
3,118,515 + +0.2
3,118,515 + +1.4
3,118,515 + -0.5
3,118,516 - -0.9
3,118,523 - +0.4
3,118,523 - -0.1
3,118,568 + -1.1
3,118,576 - +1.1
3,118,610 - -0.3
3,118,738 - MPMX20_02986 0.18 -2.1
3,118,748 - MPMX20_02986 0.19 -1.2
3,118,882 + MPMX20_02986 0.29 +0.4
3,118,906 - MPMX20_02986 0.31 -0.3
3,118,906 - MPMX20_02986 0.31 +1.5
3,118,935 - MPMX20_02986 0.33 -0.7
3,119,010 + MPMX20_02986 0.39 +1.5
3,119,132 + MPMX20_02986 0.48 +0.2
3,119,170 + MPMX20_02986 0.51 +0.1
3,119,307 - MPMX20_02986 0.61 -1.9
3,119,401 + MPMX20_02986 0.68 +0.4
3,119,407 + MPMX20_02986 0.69 -2.3
3,119,415 - MPMX20_02986 0.70 -0.5
3,119,433 + MPMX20_02986 0.71 -0.1
3,119,433 + MPMX20_02986 0.71 +0.8
3,119,433 + MPMX20_02986 0.71 +3.5
3,119,441 - MPMX20_02986 0.72 -1.9
3,119,554 + MPMX20_02986 0.80 -1.2
3,119,573 + MPMX20_02986 0.82 -0.4
3,119,619 - MPMX20_02986 0.85 -0.8
3,119,642 + MPMX20_02986 0.87 +1.8
3,119,642 + MPMX20_02986 0.87 -1.2
3,119,642 + MPMX20_02986 0.87 +0.2
3,119,642 + MPMX20_02986 0.87 -1.1
3,119,642 + MPMX20_02986 0.87 -2.5
3,119,650 - MPMX20_02986 0.87 +0.1
3,119,669 - MPMX20_02986 0.89 -0.2
3,119,736 + -0.4
3,119,744 - -1.0
3,119,901 + +1.9
3,119,912 + -1.3
3,119,912 + +0.2
3,119,946 + +0.2
3,119,955 - +0.2
3,120,023 + -0.8
3,120,031 - +0.5
3,120,154 + MPMX20_02987 0.18 +2.1
3,120,159 + MPMX20_02987 0.19 -0.2
3,120,162 - MPMX20_02987 0.19 +0.8
3,120,162 - MPMX20_02987 0.19 +0.8
3,120,183 + MPMX20_02987 0.20 +0.7
3,120,206 + MPMX20_02987 0.22 -0.1
3,120,206 + MPMX20_02987 0.22 -0.6
3,120,206 + MPMX20_02987 0.22 -0.1
3,120,214 - MPMX20_02987 0.22 -0.3
3,120,214 - MPMX20_02987 0.22 +1.3
3,120,214 - MPMX20_02987 0.22 +1.9
3,120,274 + MPMX20_02987 0.26 -0.4
3,120,286 + MPMX20_02987 0.27 +0.5
3,120,286 + MPMX20_02987 0.27 -1.4
3,120,484 + MPMX20_02987 0.41 +1.4
3,120,495 - MPMX20_02987 0.42 -1.2
3,120,551 - MPMX20_02987 0.45 +0.4
3,120,566 + MPMX20_02987 0.47 -0.9
3,120,581 + MPMX20_02987 0.48 +2.4
3,120,581 + MPMX20_02987 0.48 +1.4
3,120,632 + MPMX20_02987 0.51 -0.5
3,120,645 - MPMX20_02987 0.52 -0.5
3,120,813 - MPMX20_02987 0.64 +3.1

Or see this region's nucleotide sequence