Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00417

Experiment: 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00416 and MPMX20_00417 overlap by 25 nucleotidesMPMX20_00417 and MPMX20_00418 are separated by 113 nucleotides MPMX20_00416: MPMX20_00416 - Thiol:disulfide interchange protein DsbD, at 431,688 to 433,391 _00416 MPMX20_00417: MPMX20_00417 - Divalent-cation tolerance protein CutA, at 433,367 to 433,690 _00417 MPMX20_00418: MPMX20_00418 - Anaerobic C4-dicarboxylate transporter DcuA, at 433,804 to 435,105 _00418 Position (kb) 433 434Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 432.419 kb on + strand, within MPMX20_00416at 432.420 kb on - strand, within MPMX20_00416at 432.427 kb on - strand, within MPMX20_00416at 432.431 kb on + strand, within MPMX20_00416at 432.431 kb on + strand, within MPMX20_00416at 432.431 kb on + strand, within MPMX20_00416at 432.434 kb on - strand, within MPMX20_00416at 432.439 kb on - strand, within MPMX20_00416at 432.439 kb on - strand, within MPMX20_00416at 432.439 kb on - strand, within MPMX20_00416at 432.441 kb on + strand, within MPMX20_00416at 432.441 kb on - strand, within MPMX20_00416at 432.461 kb on + strand, within MPMX20_00416at 432.486 kb on - strand, within MPMX20_00416at 432.536 kb on + strand, within MPMX20_00416at 432.589 kb on + strand, within MPMX20_00416at 432.600 kb on + strand, within MPMX20_00416at 432.602 kb on - strand, within MPMX20_00416at 432.648 kb on + strand, within MPMX20_00416at 432.652 kb on + strand, within MPMX20_00416at 432.658 kb on - strand, within MPMX20_00416at 432.666 kb on - strand, within MPMX20_00416at 432.681 kb on - strand, within MPMX20_00416at 432.701 kb on + strand, within MPMX20_00416at 432.708 kb on + strand, within MPMX20_00416at 432.716 kb on - strand, within MPMX20_00416at 432.716 kb on - strand, within MPMX20_00416at 432.718 kb on + strand, within MPMX20_00416at 432.723 kb on + strand, within MPMX20_00416at 432.726 kb on - strand, within MPMX20_00416at 432.730 kb on + strand, within MPMX20_00416at 432.731 kb on - strand, within MPMX20_00416at 432.731 kb on - strand, within MPMX20_00416at 432.738 kb on - strand, within MPMX20_00416at 432.755 kb on - strand, within MPMX20_00416at 432.775 kb on + strand, within MPMX20_00416at 432.783 kb on + strand, within MPMX20_00416at 432.783 kb on - strand, within MPMX20_00416at 432.789 kb on - strand, within MPMX20_00416at 432.795 kb on + strand, within MPMX20_00416at 432.823 kb on + strand, within MPMX20_00416at 432.842 kb on + strand, within MPMX20_00416at 432.891 kb on + strand, within MPMX20_00416at 432.899 kb on - strand, within MPMX20_00416at 432.909 kb on - strand, within MPMX20_00416at 432.909 kb on - strand, within MPMX20_00416at 432.909 kb on - strand, within MPMX20_00416at 432.928 kb on - strand, within MPMX20_00416at 432.935 kb on - strand, within MPMX20_00416at 433.008 kb on + strand, within MPMX20_00416at 433.016 kb on - strand, within MPMX20_00416at 433.024 kb on + strand, within MPMX20_00416at 433.029 kb on + strand, within MPMX20_00416at 433.029 kb on + strand, within MPMX20_00416at 433.037 kb on - strand, within MPMX20_00416at 433.037 kb on - strand, within MPMX20_00416at 433.096 kb on - strand, within MPMX20_00416at 433.155 kb on + strand, within MPMX20_00416at 433.155 kb on + strand, within MPMX20_00416at 433.155 kb on + strand, within MPMX20_00416at 433.163 kb on - strand, within MPMX20_00416at 433.166 kb on + strand, within MPMX20_00416at 433.171 kb on + strand, within MPMX20_00416at 433.171 kb on + strand, within MPMX20_00416at 433.179 kb on - strand, within MPMX20_00416at 433.179 kb on - strand, within MPMX20_00416at 433.192 kb on + strand, within MPMX20_00416at 433.192 kb on + strand, within MPMX20_00416at 433.192 kb on + strand, within MPMX20_00416at 433.192 kb on + strand, within MPMX20_00416at 433.200 kb on - strand, within MPMX20_00416at 433.200 kb on - strand, within MPMX20_00416at 433.200 kb on - strand, within MPMX20_00416at 433.200 kb on - strand, within MPMX20_00416at 433.200 kb on - strand, within MPMX20_00416at 433.200 kb on - strand, within MPMX20_00416at 433.202 kb on + strand, within MPMX20_00416at 433.213 kb on + strand, within MPMX20_00416at 433.223 kb on - strandat 433.250 kb on + strandat 433.351 kb on + strandat 433.356 kb on - strandat 433.359 kb on - strandat 433.370 kb on + strandat 433.380 kb on + strandat 433.388 kb on - strandat 433.472 kb on + strand, within MPMX20_00417at 433.472 kb on + strand, within MPMX20_00417at 433.472 kb on + strand, within MPMX20_00417at 433.472 kb on + strand, within MPMX20_00417at 433.472 kb on + strand, within MPMX20_00417at 433.472 kb on + strand, within MPMX20_00417at 433.472 kb on + strand, within MPMX20_00417at 433.472 kb on + strand, within MPMX20_00417at 433.472 kb on + strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.480 kb on - strand, within MPMX20_00417at 433.511 kb on - strand, within MPMX20_00417at 433.514 kb on + strand, within MPMX20_00417at 433.514 kb on + strand, within MPMX20_00417at 433.561 kb on - strand, within MPMX20_00417at 433.628 kb on + strand, within MPMX20_00417at 433.628 kb on + strand, within MPMX20_00417at 433.633 kb on + strand, within MPMX20_00417at 433.636 kb on - strand, within MPMX20_00417at 433.636 kb on - strand, within MPMX20_00417at 433.664 kb on - strandat 433.706 kb on + strandat 433.927 kb on - strandat 433.937 kb on + strand, within MPMX20_00418at 433.947 kb on + strand, within MPMX20_00418at 433.947 kb on + strand, within MPMX20_00418at 433.982 kb on - strand, within MPMX20_00418at 433.982 kb on - strand, within MPMX20_00418at 434.000 kb on + strand, within MPMX20_00418at 434.013 kb on + strand, within MPMX20_00418at 434.013 kb on + strand, within MPMX20_00418at 434.041 kb on + strand, within MPMX20_00418at 434.041 kb on + strand, within MPMX20_00418at 434.041 kb on + strand, within MPMX20_00418at 434.049 kb on - strand, within MPMX20_00418at 434.064 kb on + strand, within MPMX20_00418at 434.072 kb on - strand, within MPMX20_00418at 434.077 kb on - strand, within MPMX20_00418at 434.105 kb on + strand, within MPMX20_00418at 434.146 kb on + strand, within MPMX20_00418at 434.146 kb on + strand, within MPMX20_00418at 434.146 kb on + strand, within MPMX20_00418at 434.154 kb on - strand, within MPMX20_00418at 434.184 kb on + strand, within MPMX20_00418at 434.189 kb on + strand, within MPMX20_00418at 434.213 kb on - strand, within MPMX20_00418at 434.213 kb on - strand, within MPMX20_00418at 434.240 kb on - strand, within MPMX20_00418at 434.282 kb on + strand, within MPMX20_00418at 434.290 kb on - strand, within MPMX20_00418at 434.340 kb on + strand, within MPMX20_00418at 434.358 kb on + strand, within MPMX20_00418at 434.366 kb on - strand, within MPMX20_00418at 434.392 kb on - strand, within MPMX20_00418at 434.397 kb on - strand, within MPMX20_00418at 434.427 kb on - strand, within MPMX20_00418at 434.427 kb on - strand, within MPMX20_00418at 434.558 kb on - strand, within MPMX20_00418at 434.573 kb on - strand, within MPMX20_00418at 434.627 kb on + strand, within MPMX20_00418at 434.627 kb on + strand, within MPMX20_00418at 434.631 kb on + strand, within MPMX20_00418at 434.671 kb on - strand, within MPMX20_00418

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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432,419 + MPMX20_00416 0.43 -1.3
432,420 - MPMX20_00416 0.43 -0.3
432,427 - MPMX20_00416 0.43 -0.3
432,431 + MPMX20_00416 0.44 -0.9
432,431 + MPMX20_00416 0.44 -0.1
432,431 + MPMX20_00416 0.44 +0.9
432,434 - MPMX20_00416 0.44 +0.7
432,439 - MPMX20_00416 0.44 -0.5
432,439 - MPMX20_00416 0.44 -1.5
432,439 - MPMX20_00416 0.44 -0.3
432,441 + MPMX20_00416 0.44 +1.2
432,441 - MPMX20_00416 0.44 -1.4
432,461 + MPMX20_00416 0.45 +0.1
432,486 - MPMX20_00416 0.47 -0.1
432,536 + MPMX20_00416 0.50 -1.8
432,589 + MPMX20_00416 0.53 -0.0
432,600 + MPMX20_00416 0.54 +0.5
432,602 - MPMX20_00416 0.54 -0.5
432,648 + MPMX20_00416 0.56 +0.1
432,652 + MPMX20_00416 0.57 +0.2
432,658 - MPMX20_00416 0.57 +0.8
432,666 - MPMX20_00416 0.57 +0.2
432,681 - MPMX20_00416 0.58 -1.2
432,701 + MPMX20_00416 0.59 -1.6
432,708 + MPMX20_00416 0.60 -1.4
432,716 - MPMX20_00416 0.60 -0.2
432,716 - MPMX20_00416 0.60 -0.4
432,718 + MPMX20_00416 0.60 -0.9
432,723 + MPMX20_00416 0.61 -0.4
432,726 - MPMX20_00416 0.61 -1.3
432,730 + MPMX20_00416 0.61 -0.3
432,731 - MPMX20_00416 0.61 -0.6
432,731 - MPMX20_00416 0.61 -1.0
432,738 - MPMX20_00416 0.62 +0.2
432,755 - MPMX20_00416 0.63 -1.1
432,775 + MPMX20_00416 0.64 -1.1
432,783 + MPMX20_00416 0.64 -0.8
432,783 - MPMX20_00416 0.64 -0.3
432,789 - MPMX20_00416 0.65 -0.2
432,795 + MPMX20_00416 0.65 -0.9
432,823 + MPMX20_00416 0.67 -0.9
432,842 + MPMX20_00416 0.68 -1.2
432,891 + MPMX20_00416 0.71 -1.7
432,899 - MPMX20_00416 0.71 -0.9
432,909 - MPMX20_00416 0.72 +0.1
432,909 - MPMX20_00416 0.72 +0.3
432,909 - MPMX20_00416 0.72 +0.2
432,928 - MPMX20_00416 0.73 +0.9
432,935 - MPMX20_00416 0.73 +1.1
433,008 + MPMX20_00416 0.77 -2.0
433,016 - MPMX20_00416 0.78 -0.6
433,024 + MPMX20_00416 0.78 -0.1
433,029 + MPMX20_00416 0.79 -1.5
433,029 + MPMX20_00416 0.79 -0.3
433,037 - MPMX20_00416 0.79 -0.4
433,037 - MPMX20_00416 0.79 +0.2
433,096 - MPMX20_00416 0.83 -0.9
433,155 + MPMX20_00416 0.86 -1.4
433,155 + MPMX20_00416 0.86 +1.1
433,155 + MPMX20_00416 0.86 +1.5
433,163 - MPMX20_00416 0.87 -1.6
433,166 + MPMX20_00416 0.87 -0.9
433,171 + MPMX20_00416 0.87 +1.6
433,171 + MPMX20_00416 0.87 +0.1
433,179 - MPMX20_00416 0.88 -0.5
433,179 - MPMX20_00416 0.88 -0.5
433,192 + MPMX20_00416 0.88 -0.3
433,192 + MPMX20_00416 0.88 -0.2
433,192 + MPMX20_00416 0.88 +0.1
433,192 + MPMX20_00416 0.88 -1.6
433,200 - MPMX20_00416 0.89 -2.2
433,200 - MPMX20_00416 0.89 -0.5
433,200 - MPMX20_00416 0.89 +0.2
433,200 - MPMX20_00416 0.89 +0.6
433,200 - MPMX20_00416 0.89 +3.1
433,200 - MPMX20_00416 0.89 +0.6
433,202 + MPMX20_00416 0.89 -0.1
433,213 + MPMX20_00416 0.89 -0.2
433,223 - -1.4
433,250 + +6.6
433,351 + +1.6
433,356 - -0.2
433,359 - -0.2
433,370 + -0.5
433,380 + -0.5
433,388 - -0.1
433,472 + MPMX20_00417 0.32 +0.2
433,472 + MPMX20_00417 0.32 -0.6
433,472 + MPMX20_00417 0.32 -0.5
433,472 + MPMX20_00417 0.32 -1.1
433,472 + MPMX20_00417 0.32 -0.6
433,472 + MPMX20_00417 0.32 -0.5
433,472 + MPMX20_00417 0.32 +0.3
433,472 + MPMX20_00417 0.32 -0.7
433,472 + MPMX20_00417 0.32 -0.5
433,480 - MPMX20_00417 0.35 -0.1
433,480 - MPMX20_00417 0.35 -0.9
433,480 - MPMX20_00417 0.35 +1.7
433,480 - MPMX20_00417 0.35 +0.5
433,480 - MPMX20_00417 0.35 +1.1
433,480 - MPMX20_00417 0.35 -1.2
433,480 - MPMX20_00417 0.35 +0.5
433,480 - MPMX20_00417 0.35 +0.2
433,480 - MPMX20_00417 0.35 -0.2
433,480 - MPMX20_00417 0.35 +0.2
433,480 - MPMX20_00417 0.35 -3.2
433,480 - MPMX20_00417 0.35 +0.1
433,480 - MPMX20_00417 0.35 +0.2
433,511 - MPMX20_00417 0.44 -0.2
433,514 + MPMX20_00417 0.45 -1.2
433,514 + MPMX20_00417 0.45 -0.9
433,561 - MPMX20_00417 0.60 +0.1
433,628 + MPMX20_00417 0.81 +0.2
433,628 + MPMX20_00417 0.81 -0.8
433,633 + MPMX20_00417 0.82 +3.2
433,636 - MPMX20_00417 0.83 +1.1
433,636 - MPMX20_00417 0.83 -0.5
433,664 - -0.4
433,706 + -0.4
433,927 - +1.1
433,937 + MPMX20_00418 0.10 +0.2
433,947 + MPMX20_00418 0.11 +0.5
433,947 + MPMX20_00418 0.11 -0.0
433,982 - MPMX20_00418 0.14 -0.6
433,982 - MPMX20_00418 0.14 -0.8
434,000 + MPMX20_00418 0.15 -0.8
434,013 + MPMX20_00418 0.16 -1.4
434,013 + MPMX20_00418 0.16 +0.1
434,041 + MPMX20_00418 0.18 -0.4
434,041 + MPMX20_00418 0.18 +0.7
434,041 + MPMX20_00418 0.18 +1.1
434,049 - MPMX20_00418 0.19 -1.4
434,064 + MPMX20_00418 0.20 +2.1
434,072 - MPMX20_00418 0.21 +0.6
434,077 - MPMX20_00418 0.21 -1.1
434,105 + MPMX20_00418 0.23 +1.1
434,146 + MPMX20_00418 0.26 +0.5
434,146 + MPMX20_00418 0.26 +0.5
434,146 + MPMX20_00418 0.26 +0.1
434,154 - MPMX20_00418 0.27 +0.5
434,184 + MPMX20_00418 0.29 +0.2
434,189 + MPMX20_00418 0.30 +0.1
434,213 - MPMX20_00418 0.31 -1.1
434,213 - MPMX20_00418 0.31 -0.6
434,240 - MPMX20_00418 0.33 +0.2
434,282 + MPMX20_00418 0.37 -0.3
434,290 - MPMX20_00418 0.37 -1.1
434,340 + MPMX20_00418 0.41 +0.7
434,358 + MPMX20_00418 0.43 -0.9
434,366 - MPMX20_00418 0.43 -0.1
434,392 - MPMX20_00418 0.45 -0.4
434,397 - MPMX20_00418 0.46 +3.7
434,427 - MPMX20_00418 0.48 +0.5
434,427 - MPMX20_00418 0.48 -1.4
434,558 - MPMX20_00418 0.58 +0.6
434,573 - MPMX20_00418 0.59 +1.9
434,627 + MPMX20_00418 0.63 +0.8
434,627 + MPMX20_00418 0.63 -1.8
434,631 + MPMX20_00418 0.64 +1.3
434,671 - MPMX20_00418 0.67 -0.5

Or see this region's nucleotide sequence