Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03123

Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03122 and MPMX20_03123 are separated by 18 nucleotidesMPMX20_03123 and MPMX20_03124 are separated by 102 nucleotides MPMX20_03122: MPMX20_03122 - hypothetical protein, at 3,279,070 to 3,280,227 _03122 MPMX20_03123: MPMX20_03123 - GTP cyclohydrolase 1, at 3,280,246 to 3,280,914 _03123 MPMX20_03124: MPMX20_03124 - hypothetical protein, at 3,281,017 to 3,282,165 _03124 Position (kb) 3280 3281Strain fitness (log2 ratio) -2 -1 0 1 2at 3279.269 kb on + strand, within MPMX20_03122at 3279.271 kb on + strand, within MPMX20_03122at 3279.277 kb on - strand, within MPMX20_03122at 3279.277 kb on - strand, within MPMX20_03122at 3279.446 kb on - strand, within MPMX20_03122at 3279.524 kb on + strand, within MPMX20_03122at 3279.524 kb on + strand, within MPMX20_03122at 3279.590 kb on + strand, within MPMX20_03122at 3279.775 kb on - strand, within MPMX20_03122at 3279.817 kb on - strand, within MPMX20_03122at 3279.898 kb on + strand, within MPMX20_03122at 3280.006 kb on + strand, within MPMX20_03122at 3280.014 kb on - strand, within MPMX20_03122at 3280.014 kb on - strand, within MPMX20_03122at 3280.024 kb on - strand, within MPMX20_03122at 3280.121 kb on + strandat 3280.121 kb on + strandat 3280.180 kb on - strandat 3280.238 kb on - strandat 3281.051 kb on + strandat 3281.051 kb on + strandat 3281.051 kb on + strandat 3281.059 kb on - strandat 3281.059 kb on - strandat 3281.059 kb on - strandat 3281.059 kb on - strandat 3281.059 kb on - strandat 3281.077 kb on - strandat 3281.077 kb on - strandat 3281.077 kb on - strandat 3281.105 kb on + strandat 3281.105 kb on + strandat 3281.113 kb on - strandat 3281.136 kb on - strand, within MPMX20_03124at 3281.145 kb on + strand, within MPMX20_03124at 3281.188 kb on - strand, within MPMX20_03124at 3281.248 kb on - strand, within MPMX20_03124at 3281.248 kb on - strand, within MPMX20_03124at 3281.313 kb on + strand, within MPMX20_03124at 3281.374 kb on + strand, within MPMX20_03124at 3281.545 kb on + strand, within MPMX20_03124at 3281.594 kb on + strand, within MPMX20_03124at 3281.594 kb on - strand, within MPMX20_03124at 3281.607 kb on + strand, within MPMX20_03124at 3281.809 kb on - strand, within MPMX20_03124at 3281.889 kb on - strand, within MPMX20_03124

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,279,269 + MPMX20_03122 0.17 +0.2
3,279,271 + MPMX20_03122 0.17 +0.0
3,279,277 - MPMX20_03122 0.18 +1.3
3,279,277 - MPMX20_03122 0.18 +1.8
3,279,446 - MPMX20_03122 0.32 -2.3
3,279,524 + MPMX20_03122 0.39 +0.2
3,279,524 + MPMX20_03122 0.39 -1.0
3,279,590 + MPMX20_03122 0.45 -0.9
3,279,775 - MPMX20_03122 0.61 -0.1
3,279,817 - MPMX20_03122 0.65 -0.1
3,279,898 + MPMX20_03122 0.72 +1.8
3,280,006 + MPMX20_03122 0.81 -1.6
3,280,014 - MPMX20_03122 0.82 -1.6
3,280,014 - MPMX20_03122 0.82 -1.6
3,280,024 - MPMX20_03122 0.82 -0.8
3,280,121 + -0.2
3,280,121 + -1.5
3,280,180 - -1.8
3,280,238 - +2.2
3,281,051 + +0.3
3,281,051 + -0.1
3,281,051 + -0.9
3,281,059 - -0.9
3,281,059 - -0.8
3,281,059 - +0.7
3,281,059 - -2.1
3,281,059 - -0.7
3,281,077 - -0.8
3,281,077 - -0.8
3,281,077 - -0.6
3,281,105 + -0.1
3,281,105 + -0.2
3,281,113 - -0.1
3,281,136 - MPMX20_03124 0.10 -1.1
3,281,145 + MPMX20_03124 0.11 -0.6
3,281,188 - MPMX20_03124 0.15 -1.4
3,281,248 - MPMX20_03124 0.20 -1.4
3,281,248 - MPMX20_03124 0.20 -0.3
3,281,313 + MPMX20_03124 0.26 -1.9
3,281,374 + MPMX20_03124 0.31 -2.3
3,281,545 + MPMX20_03124 0.46 -1.7
3,281,594 + MPMX20_03124 0.50 -1.2
3,281,594 - MPMX20_03124 0.50 +0.6
3,281,607 + MPMX20_03124 0.51 +1.3
3,281,809 - MPMX20_03124 0.69 +1.5
3,281,889 - MPMX20_03124 0.76 +1.8

Or see this region's nucleotide sequence