Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02497 and MPMX20_02498 are separated by 197 nucleotides MPMX20_02498 and MPMX20_02499 are separated by 44 nucleotides
MPMX20_02497: MPMX20_02497 - Phosphatidylglycerophosphatase B, at 2,636,106 to 2,636,873
_02497
MPMX20_02498: MPMX20_02498 - GTP cyclohydrolase-2, at 2,637,071 to 2,637,661
_02498
MPMX20_02499: MPMX20_02499 - Aconitate hydratase A, at 2,637,706 to 2,640,381
_02499
Position (kb)
2637
2638 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2636.158 kb on + strand at 2636.213 kb on + strand, within MPMX20_02497 at 2636.215 kb on + strand, within MPMX20_02497 at 2636.301 kb on - strand, within MPMX20_02497 at 2636.301 kb on - strand, within MPMX20_02497 at 2636.321 kb on + strand, within MPMX20_02497 at 2636.345 kb on + strand, within MPMX20_02497 at 2636.353 kb on - strand, within MPMX20_02497 at 2636.363 kb on - strand, within MPMX20_02497 at 2636.387 kb on + strand, within MPMX20_02497 at 2636.470 kb on + strand, within MPMX20_02497 at 2636.601 kb on + strand, within MPMX20_02497 at 2636.702 kb on - strand, within MPMX20_02497 at 2636.726 kb on + strand, within MPMX20_02497 at 2636.738 kb on + strand, within MPMX20_02497 at 2636.746 kb on - strand, within MPMX20_02497 at 2636.747 kb on + strand, within MPMX20_02497 at 2636.796 kb on + strand, within MPMX20_02497 at 2636.805 kb on - strand at 2636.856 kb on - strand at 2636.981 kb on - strand at 2637.733 kb on + strand at 2637.853 kb on - strand at 2637.891 kb on - strand at 2637.901 kb on - strand at 2637.938 kb on - strand at 2637.969 kb on - strand at 2638.023 kb on + strand, within MPMX20_02499 at 2638.044 kb on + strand, within MPMX20_02499 at 2638.053 kb on - strand, within MPMX20_02499 at 2638.064 kb on - strand, within MPMX20_02499 at 2638.069 kb on - strand, within MPMX20_02499 at 2638.231 kb on + strand, within MPMX20_02499 at 2638.239 kb on - strand, within MPMX20_02499 at 2638.239 kb on - strand, within MPMX20_02499 at 2638.247 kb on - strand, within MPMX20_02499 at 2638.297 kb on + strand, within MPMX20_02499 at 2638.298 kb on - strand, within MPMX20_02499 at 2638.321 kb on + strand, within MPMX20_02499 at 2638.409 kb on + strand, within MPMX20_02499 at 2638.409 kb on + strand, within MPMX20_02499 at 2638.409 kb on + strand, within MPMX20_02499 at 2638.412 kb on - strand, within MPMX20_02499 at 2638.417 kb on - strand, within MPMX20_02499 at 2638.432 kb on - strand, within MPMX20_02499 at 2638.468 kb on + strand, within MPMX20_02499 at 2638.503 kb on - strand, within MPMX20_02499 at 2638.537 kb on - strand, within MPMX20_02499
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,636,158 + -0.4 2,636,213 + MPMX20_02497 0.14 +0.1 2,636,215 + MPMX20_02497 0.14 -0.1 2,636,301 - MPMX20_02497 0.25 +0.4 2,636,301 - MPMX20_02497 0.25 -0.4 2,636,321 + MPMX20_02497 0.28 -1.1 2,636,345 + MPMX20_02497 0.31 -0.1 2,636,353 - MPMX20_02497 0.32 +0.4 2,636,363 - MPMX20_02497 0.33 -1.2 2,636,387 + MPMX20_02497 0.37 +0.1 2,636,470 + MPMX20_02497 0.47 -1.7 2,636,601 + MPMX20_02497 0.64 -1.1 2,636,702 - MPMX20_02497 0.78 +0.1 2,636,726 + MPMX20_02497 0.81 -0.3 2,636,738 + MPMX20_02497 0.82 +0.8 2,636,746 - MPMX20_02497 0.83 -1.1 2,636,747 + MPMX20_02497 0.83 +0.4 2,636,796 + MPMX20_02497 0.90 -0.9 2,636,805 - -0.5 2,636,856 - +0.1 2,636,981 - +1.1 2,637,733 + +0.4 2,637,853 - -0.4 2,637,891 - -0.1 2,637,901 - -0.7 2,637,938 - +0.4 2,637,969 - +0.1 2,638,023 + MPMX20_02499 0.12 -0.7 2,638,044 + MPMX20_02499 0.13 +0.1 2,638,053 - MPMX20_02499 0.13 -0.5 2,638,064 - MPMX20_02499 0.13 -0.3 2,638,069 - MPMX20_02499 0.14 +1.1 2,638,231 + MPMX20_02499 0.20 -0.4 2,638,239 - MPMX20_02499 0.20 -0.6 2,638,239 - MPMX20_02499 0.20 +1.5 2,638,247 - MPMX20_02499 0.20 -1.9 2,638,297 + MPMX20_02499 0.22 -1.0 2,638,298 - MPMX20_02499 0.22 -1.5 2,638,321 + MPMX20_02499 0.23 +0.7 2,638,409 + MPMX20_02499 0.26 +1.7 2,638,409 + MPMX20_02499 0.26 +3.7 2,638,409 + MPMX20_02499 0.26 -1.0 2,638,412 - MPMX20_02499 0.26 -1.0 2,638,417 - MPMX20_02499 0.27 +0.9 2,638,432 - MPMX20_02499 0.27 +0.5 2,638,468 + MPMX20_02499 0.28 -0.3 2,638,503 - MPMX20_02499 0.30 +1.7 2,638,537 - MPMX20_02499 0.31 +0.9
Or see this region's nucleotide sequence