Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02498

Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02497 and MPMX20_02498 are separated by 197 nucleotidesMPMX20_02498 and MPMX20_02499 are separated by 44 nucleotides MPMX20_02497: MPMX20_02497 - Phosphatidylglycerophosphatase B, at 2,636,106 to 2,636,873 _02497 MPMX20_02498: MPMX20_02498 - GTP cyclohydrolase-2, at 2,637,071 to 2,637,661 _02498 MPMX20_02499: MPMX20_02499 - Aconitate hydratase A, at 2,637,706 to 2,640,381 _02499 Position (kb) 2637 2638Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2636.158 kb on + strandat 2636.213 kb on + strand, within MPMX20_02497at 2636.215 kb on + strand, within MPMX20_02497at 2636.301 kb on - strand, within MPMX20_02497at 2636.301 kb on - strand, within MPMX20_02497at 2636.321 kb on + strand, within MPMX20_02497at 2636.345 kb on + strand, within MPMX20_02497at 2636.353 kb on - strand, within MPMX20_02497at 2636.363 kb on - strand, within MPMX20_02497at 2636.387 kb on + strand, within MPMX20_02497at 2636.470 kb on + strand, within MPMX20_02497at 2636.601 kb on + strand, within MPMX20_02497at 2636.702 kb on - strand, within MPMX20_02497at 2636.726 kb on + strand, within MPMX20_02497at 2636.738 kb on + strand, within MPMX20_02497at 2636.746 kb on - strand, within MPMX20_02497at 2636.747 kb on + strand, within MPMX20_02497at 2636.796 kb on + strand, within MPMX20_02497at 2636.805 kb on - strandat 2636.856 kb on - strandat 2636.981 kb on - strandat 2637.733 kb on + strandat 2637.853 kb on - strandat 2637.891 kb on - strandat 2637.901 kb on - strandat 2637.938 kb on - strandat 2637.969 kb on - strandat 2638.023 kb on + strand, within MPMX20_02499at 2638.044 kb on + strand, within MPMX20_02499at 2638.053 kb on - strand, within MPMX20_02499at 2638.064 kb on - strand, within MPMX20_02499at 2638.069 kb on - strand, within MPMX20_02499at 2638.231 kb on + strand, within MPMX20_02499at 2638.239 kb on - strand, within MPMX20_02499at 2638.239 kb on - strand, within MPMX20_02499at 2638.247 kb on - strand, within MPMX20_02499at 2638.297 kb on + strand, within MPMX20_02499at 2638.298 kb on - strand, within MPMX20_02499at 2638.321 kb on + strand, within MPMX20_02499at 2638.409 kb on + strand, within MPMX20_02499at 2638.409 kb on + strand, within MPMX20_02499at 2638.409 kb on + strand, within MPMX20_02499at 2638.412 kb on - strand, within MPMX20_02499at 2638.417 kb on - strand, within MPMX20_02499at 2638.432 kb on - strand, within MPMX20_02499at 2638.468 kb on + strand, within MPMX20_02499at 2638.503 kb on - strand, within MPMX20_02499at 2638.537 kb on - strand, within MPMX20_02499

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,636,158 + -0.4
2,636,213 + MPMX20_02497 0.14 +0.1
2,636,215 + MPMX20_02497 0.14 -0.1
2,636,301 - MPMX20_02497 0.25 +0.4
2,636,301 - MPMX20_02497 0.25 -0.4
2,636,321 + MPMX20_02497 0.28 -1.1
2,636,345 + MPMX20_02497 0.31 -0.1
2,636,353 - MPMX20_02497 0.32 +0.4
2,636,363 - MPMX20_02497 0.33 -1.2
2,636,387 + MPMX20_02497 0.37 +0.1
2,636,470 + MPMX20_02497 0.47 -1.7
2,636,601 + MPMX20_02497 0.64 -1.1
2,636,702 - MPMX20_02497 0.78 +0.1
2,636,726 + MPMX20_02497 0.81 -0.3
2,636,738 + MPMX20_02497 0.82 +0.8
2,636,746 - MPMX20_02497 0.83 -1.1
2,636,747 + MPMX20_02497 0.83 +0.4
2,636,796 + MPMX20_02497 0.90 -0.9
2,636,805 - -0.5
2,636,856 - +0.1
2,636,981 - +1.1
2,637,733 + +0.4
2,637,853 - -0.4
2,637,891 - -0.1
2,637,901 - -0.7
2,637,938 - +0.4
2,637,969 - +0.1
2,638,023 + MPMX20_02499 0.12 -0.7
2,638,044 + MPMX20_02499 0.13 +0.1
2,638,053 - MPMX20_02499 0.13 -0.5
2,638,064 - MPMX20_02499 0.13 -0.3
2,638,069 - MPMX20_02499 0.14 +1.1
2,638,231 + MPMX20_02499 0.20 -0.4
2,638,239 - MPMX20_02499 0.20 -0.6
2,638,239 - MPMX20_02499 0.20 +1.5
2,638,247 - MPMX20_02499 0.20 -1.9
2,638,297 + MPMX20_02499 0.22 -1.0
2,638,298 - MPMX20_02499 0.22 -1.5
2,638,321 + MPMX20_02499 0.23 +0.7
2,638,409 + MPMX20_02499 0.26 +1.7
2,638,409 + MPMX20_02499 0.26 +3.7
2,638,409 + MPMX20_02499 0.26 -1.0
2,638,412 - MPMX20_02499 0.26 -1.0
2,638,417 - MPMX20_02499 0.27 +0.9
2,638,432 - MPMX20_02499 0.27 +0.5
2,638,468 + MPMX20_02499 0.28 -0.3
2,638,503 - MPMX20_02499 0.30 +1.7
2,638,537 - MPMX20_02499 0.31 +0.9

Or see this region's nucleotide sequence