Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01840 and MPMX20_01841 are separated by 432 nucleotides MPMX20_01841 and MPMX20_01842 are separated by 91 nucleotides MPMX20_01842 and MPMX20_01843 are separated by 47 nucleotides
MPMX20_01840: MPMX20_01840 - hypothetical protein, at 1,932,787 to 1,934,721
_01840
MPMX20_01841: MPMX20_01841 - MltA-interacting protein, at 1,935,154 to 1,935,903
_01841
MPMX20_01842: MPMX20_01842 - putative oxidoreductase, at 1,935,995 to 1,936,849
_01842
MPMX20_01843: MPMX20_01843 - Putative glucose-6-phosphate 1-epimerase, at 1,936,897 to 1,937,781
_01843
Position (kb)
1935
1936 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1934.183 kb on + strand, within MPMX20_01840 at 1934.207 kb on + strand, within MPMX20_01840 at 1934.284 kb on + strand, within MPMX20_01840 at 1934.391 kb on - strand, within MPMX20_01840 at 1934.423 kb on + strand, within MPMX20_01840 at 1934.461 kb on - strand, within MPMX20_01840 at 1934.475 kb on + strand, within MPMX20_01840 at 1934.483 kb on + strand, within MPMX20_01840 at 1934.483 kb on + strand, within MPMX20_01840 at 1934.483 kb on + strand, within MPMX20_01840 at 1934.483 kb on + strand, within MPMX20_01840 at 1934.614 kb on + strand at 1934.614 kb on + strand at 1934.614 kb on + strand at 1934.614 kb on + strand at 1934.622 kb on - strand at 1934.622 kb on - strand at 1934.661 kb on - strand at 1934.668 kb on + strand at 1934.668 kb on + strand at 1934.668 kb on - strand at 1934.751 kb on + strand at 1934.751 kb on + strand at 1934.751 kb on + strand at 1934.751 kb on + strand at 1934.751 kb on + strand at 1934.752 kb on + strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.759 kb on - strand at 1934.760 kb on - strand at 1934.760 kb on - strand at 1934.760 kb on - strand at 1934.788 kb on + strand at 1934.805 kb on + strand at 1934.805 kb on + strand at 1934.825 kb on + strand at 1934.826 kb on + strand at 1934.836 kb on + strand at 1934.837 kb on + strand at 1934.844 kb on - strand at 1934.844 kb on - strand at 1934.894 kb on + strand at 1934.900 kb on - strand at 1934.983 kb on - strand at 1934.983 kb on - strand at 1935.024 kb on - strand at 1935.035 kb on - strand at 1935.054 kb on + strand at 1935.076 kb on - strand at 1935.107 kb on + strand at 1935.114 kb on - strand at 1935.116 kb on - strand at 1935.174 kb on + strand at 1935.214 kb on - strand at 1935.231 kb on + strand, within MPMX20_01841 at 1935.256 kb on - strand, within MPMX20_01841 at 1935.261 kb on - strand, within MPMX20_01841 at 1935.285 kb on - strand, within MPMX20_01841 at 1935.451 kb on - strand, within MPMX20_01841 at 1935.451 kb on - strand, within MPMX20_01841 at 1935.495 kb on + strand, within MPMX20_01841 at 1935.514 kb on + strand, within MPMX20_01841 at 1935.551 kb on + strand, within MPMX20_01841 at 1935.588 kb on - strand, within MPMX20_01841 at 1935.590 kb on + strand, within MPMX20_01841 at 1935.593 kb on - strand, within MPMX20_01841 at 1935.606 kb on - strand, within MPMX20_01841 at 1935.643 kb on + strand, within MPMX20_01841 at 1935.653 kb on - strand, within MPMX20_01841 at 1935.674 kb on + strand, within MPMX20_01841 at 1935.674 kb on + strand, within MPMX20_01841 at 1935.682 kb on - strand, within MPMX20_01841 at 1935.709 kb on + strand, within MPMX20_01841 at 1935.709 kb on + strand, within MPMX20_01841 at 1935.744 kb on + strand, within MPMX20_01841 at 1935.745 kb on - strand, within MPMX20_01841 at 1935.800 kb on - strand, within MPMX20_01841 at 1935.808 kb on - strand, within MPMX20_01841 at 1935.820 kb on - strand, within MPMX20_01841 at 1935.858 kb on + strand at 1935.909 kb on + strand at 1936.034 kb on + strand at 1936.121 kb on + strand, within MPMX20_01842 at 1936.148 kb on + strand, within MPMX20_01842 at 1936.170 kb on + strand, within MPMX20_01842 at 1936.273 kb on - strand, within MPMX20_01842 at 1936.297 kb on + strand, within MPMX20_01842 at 1936.305 kb on - strand, within MPMX20_01842 at 1936.324 kb on - strand, within MPMX20_01842 at 1936.333 kb on - strand, within MPMX20_01842 at 1936.380 kb on - strand, within MPMX20_01842 at 1936.466 kb on + strand, within MPMX20_01842 at 1936.470 kb on - strand, within MPMX20_01842 at 1936.542 kb on - strand, within MPMX20_01842 at 1936.590 kb on - strand, within MPMX20_01842 at 1936.602 kb on + strand, within MPMX20_01842 at 1936.684 kb on + strand, within MPMX20_01842 at 1936.686 kb on - strand, within MPMX20_01842 at 1936.747 kb on - strand, within MPMX20_01842 at 1936.758 kb on - strand, within MPMX20_01842 at 1936.762 kb on + strand, within MPMX20_01842 at 1936.765 kb on + strand at 1936.806 kb on - strand at 1936.829 kb on - strand at 1936.829 kb on - strand at 1936.862 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,934,183 + MPMX20_01840 0.72 -0.4 1,934,207 + MPMX20_01840 0.73 -0.8 1,934,284 + MPMX20_01840 0.77 +0.4 1,934,391 - MPMX20_01840 0.83 +0.1 1,934,423 + MPMX20_01840 0.85 +0.3 1,934,461 - MPMX20_01840 0.87 +0.5 1,934,475 + MPMX20_01840 0.87 +0.8 1,934,483 + MPMX20_01840 0.88 -2.2 1,934,483 + MPMX20_01840 0.88 -0.1 1,934,483 + MPMX20_01840 0.88 +0.5 1,934,483 + MPMX20_01840 0.88 -0.2 1,934,614 + +1.1 1,934,614 + +0.1 1,934,614 + -0.4 1,934,614 + +0.3 1,934,622 - +0.1 1,934,622 - -1.0 1,934,661 - -1.1 1,934,668 + -0.3 1,934,668 + +1.1 1,934,668 - +0.1 1,934,751 + -0.9 1,934,751 + -0.2 1,934,751 + +0.7 1,934,751 + +2.3 1,934,751 + +0.2 1,934,752 + +0.1 1,934,759 - +0.0 1,934,759 - +1.1 1,934,759 - -1.3 1,934,759 - +2.7 1,934,759 - -0.6 1,934,759 - +0.2 1,934,760 - -0.9 1,934,760 - +1.7 1,934,760 - -0.1 1,934,788 + +0.3 1,934,805 + -0.8 1,934,805 + +0.7 1,934,825 + +0.2 1,934,826 + -0.7 1,934,836 + +2.3 1,934,837 + -0.9 1,934,844 - +1.7 1,934,844 - -0.4 1,934,894 + -0.3 1,934,900 - +0.4 1,934,983 - +2.1 1,934,983 - +1.1 1,935,024 - -1.4 1,935,035 - +0.4 1,935,054 + -0.3 1,935,076 - +3.3 1,935,107 + +0.0 1,935,114 - -1.1 1,935,116 - -0.9 1,935,174 + +0.6 1,935,214 - -0.1 1,935,231 + MPMX20_01841 0.10 -0.1 1,935,256 - MPMX20_01841 0.14 -0.9 1,935,261 - MPMX20_01841 0.14 -0.2 1,935,285 - MPMX20_01841 0.17 +0.4 1,935,451 - MPMX20_01841 0.40 +0.4 1,935,451 - MPMX20_01841 0.40 -1.4 1,935,495 + MPMX20_01841 0.45 -1.1 1,935,514 + MPMX20_01841 0.48 +0.0 1,935,551 + MPMX20_01841 0.53 +0.4 1,935,588 - MPMX20_01841 0.58 -0.1 1,935,590 + MPMX20_01841 0.58 -3.2 1,935,593 - MPMX20_01841 0.59 -0.8 1,935,606 - MPMX20_01841 0.60 -2.0 1,935,643 + MPMX20_01841 0.65 -0.6 1,935,653 - MPMX20_01841 0.67 +0.7 1,935,674 + MPMX20_01841 0.69 -0.6 1,935,674 + MPMX20_01841 0.69 -0.7 1,935,682 - MPMX20_01841 0.70 -2.7 1,935,709 + MPMX20_01841 0.74 +0.0 1,935,709 + MPMX20_01841 0.74 -0.8 1,935,744 + MPMX20_01841 0.79 -1.3 1,935,745 - MPMX20_01841 0.79 -0.2 1,935,800 - MPMX20_01841 0.86 +0.2 1,935,808 - MPMX20_01841 0.87 +0.4 1,935,820 - MPMX20_01841 0.89 -0.1 1,935,858 + +1.1 1,935,909 + +1.1 1,936,034 + +0.3 1,936,121 + MPMX20_01842 0.15 -0.1 1,936,148 + MPMX20_01842 0.18 -0.0 1,936,170 + MPMX20_01842 0.20 -1.4 1,936,273 - MPMX20_01842 0.33 -0.4 1,936,297 + MPMX20_01842 0.35 -1.3 1,936,305 - MPMX20_01842 0.36 -2.4 1,936,324 - MPMX20_01842 0.38 +0.1 1,936,333 - MPMX20_01842 0.40 +2.7 1,936,380 - MPMX20_01842 0.45 +0.8 1,936,466 + MPMX20_01842 0.55 -0.1 1,936,470 - MPMX20_01842 0.56 -1.0 1,936,542 - MPMX20_01842 0.64 -1.7 1,936,590 - MPMX20_01842 0.70 -1.2 1,936,602 + MPMX20_01842 0.71 +1.4 1,936,684 + MPMX20_01842 0.81 -0.9 1,936,686 - MPMX20_01842 0.81 +0.9 1,936,747 - MPMX20_01842 0.88 -0.3 1,936,758 - MPMX20_01842 0.89 -0.6 1,936,762 + MPMX20_01842 0.90 -1.0 1,936,765 + -0.1 1,936,806 - -0.5 1,936,829 - +0.5 1,936,829 - -0.2 1,936,862 + -0.1
Or see this region's nucleotide sequence