Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01016 and MPMX20_01017 are separated by 203 nucleotides MPMX20_01017 and MPMX20_01018 are separated by 32 nucleotides
MPMX20_01016: MPMX20_01016 - 2-dehydropantoate 2-reductase, at 1,068,790 to 1,069,701
_01016
MPMX20_01017: MPMX20_01017 - hypothetical protein, at 1,069,905 to 1,070,396
_01017
MPMX20_01018: MPMX20_01018 - Inner membrane transport protein YajR, at 1,070,429 to 1,071,790
_01018
Position (kb)
1069
1070
1071 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1068.922 kb on + strand, within MPMX20_01016 at 1069.018 kb on + strand, within MPMX20_01016 at 1069.074 kb on - strand, within MPMX20_01016 at 1069.207 kb on - strand, within MPMX20_01016 at 1069.207 kb on - strand, within MPMX20_01016 at 1069.379 kb on + strand, within MPMX20_01016 at 1069.379 kb on + strand, within MPMX20_01016 at 1069.422 kb on + strand, within MPMX20_01016 at 1069.422 kb on + strand, within MPMX20_01016 at 1069.472 kb on + strand, within MPMX20_01016 at 1069.484 kb on + strand, within MPMX20_01016 at 1069.560 kb on - strand, within MPMX20_01016 at 1069.589 kb on - strand, within MPMX20_01016 at 1069.597 kb on + strand, within MPMX20_01016 at 1069.605 kb on - strand, within MPMX20_01016 at 1069.605 kb on - strand, within MPMX20_01016 at 1069.618 kb on + strand at 1069.618 kb on + strand at 1069.618 kb on + strand at 1069.618 kb on + strand at 1069.618 kb on + strand at 1069.626 kb on + strand at 1069.626 kb on - strand at 1069.626 kb on - strand at 1069.626 kb on - strand at 1069.655 kb on + strand at 1069.663 kb on - strand at 1069.663 kb on - strand at 1069.673 kb on - strand at 1069.673 kb on - strand at 1069.679 kb on + strand at 1069.687 kb on - strand at 1069.744 kb on + strand at 1069.797 kb on + strand at 1069.801 kb on + strand at 1069.816 kb on + strand at 1069.854 kb on + strand at 1069.866 kb on + strand at 1069.874 kb on - strand at 1070.017 kb on + strand, within MPMX20_01017 at 1070.087 kb on + strand, within MPMX20_01017 at 1070.111 kb on + strand, within MPMX20_01017 at 1070.130 kb on - strand, within MPMX20_01017 at 1070.155 kb on + strand, within MPMX20_01017 at 1070.213 kb on - strand, within MPMX20_01017 at 1070.213 kb on - strand, within MPMX20_01017 at 1070.213 kb on - strand, within MPMX20_01017 at 1070.213 kb on - strand, within MPMX20_01017 at 1070.258 kb on + strand, within MPMX20_01017 at 1070.503 kb on + strand at 1070.511 kb on - strand at 1070.801 kb on - strand, within MPMX20_01018 at 1070.847 kb on + strand, within MPMX20_01018 at 1070.847 kb on - strand, within MPMX20_01018 at 1071.065 kb on - strand, within MPMX20_01018 at 1071.182 kb on + strand, within MPMX20_01018 at 1071.182 kb on + strand, within MPMX20_01018 at 1071.190 kb on - strand, within MPMX20_01018 at 1071.190 kb on - strand, within MPMX20_01018 at 1071.250 kb on + strand, within MPMX20_01018 at 1071.250 kb on + strand, within MPMX20_01018 at 1071.250 kb on + strand, within MPMX20_01018 at 1071.258 kb on - strand, within MPMX20_01018 at 1071.258 kb on - strand, within MPMX20_01018 at 1071.258 kb on - strand, within MPMX20_01018 at 1071.290 kb on - strand, within MPMX20_01018 at 1071.315 kb on - strand, within MPMX20_01018 at 1071.315 kb on - strand, within MPMX20_01018
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,068,922 + MPMX20_01016 0.14 +0.7 1,069,018 + MPMX20_01016 0.25 +0.1 1,069,074 - MPMX20_01016 0.31 -1.2 1,069,207 - MPMX20_01016 0.46 +0.1 1,069,207 - MPMX20_01016 0.46 +1.7 1,069,379 + MPMX20_01016 0.65 -1.0 1,069,379 + MPMX20_01016 0.65 -0.7 1,069,422 + MPMX20_01016 0.69 +1.1 1,069,422 + MPMX20_01016 0.69 -0.6 1,069,472 + MPMX20_01016 0.75 +1.3 1,069,484 + MPMX20_01016 0.76 -2.0 1,069,560 - MPMX20_01016 0.84 +1.7 1,069,589 - MPMX20_01016 0.88 -0.3 1,069,597 + MPMX20_01016 0.88 +1.1 1,069,605 - MPMX20_01016 0.89 -0.1 1,069,605 - MPMX20_01016 0.89 -1.2 1,069,618 + +0.4 1,069,618 + +0.1 1,069,618 + -0.0 1,069,618 + +0.4 1,069,618 + -0.9 1,069,626 + +2.7 1,069,626 - +0.6 1,069,626 - -0.6 1,069,626 - +1.7 1,069,655 + -1.9 1,069,663 - -0.7 1,069,663 - +2.7 1,069,673 - +0.4 1,069,673 - -0.2 1,069,679 + -0.1 1,069,687 - -0.1 1,069,744 + -0.4 1,069,797 + +0.1 1,069,801 + -0.6 1,069,816 + -0.6 1,069,854 + -1.2 1,069,866 + +0.3 1,069,874 - -1.0 1,070,017 + MPMX20_01017 0.23 -0.5 1,070,087 + MPMX20_01017 0.37 -2.0 1,070,111 + MPMX20_01017 0.42 -2.0 1,070,130 - MPMX20_01017 0.46 -0.3 1,070,155 + MPMX20_01017 0.51 +0.4 1,070,213 - MPMX20_01017 0.63 -1.0 1,070,213 - MPMX20_01017 0.63 -1.0 1,070,213 - MPMX20_01017 0.63 +0.1 1,070,213 - MPMX20_01017 0.63 -1.3 1,070,258 + MPMX20_01017 0.72 -0.6 1,070,503 + +1.7 1,070,511 - -1.5 1,070,801 - MPMX20_01018 0.27 +0.1 1,070,847 + MPMX20_01018 0.31 +0.4 1,070,847 - MPMX20_01018 0.31 -0.7 1,071,065 - MPMX20_01018 0.47 +0.4 1,071,182 + MPMX20_01018 0.55 -0.9 1,071,182 + MPMX20_01018 0.55 -0.5 1,071,190 - MPMX20_01018 0.56 +1.1 1,071,190 - MPMX20_01018 0.56 +1.1 1,071,250 + MPMX20_01018 0.60 +0.4 1,071,250 + MPMX20_01018 0.60 -0.6 1,071,250 + MPMX20_01018 0.60 -1.2 1,071,258 - MPMX20_01018 0.61 -1.4 1,071,258 - MPMX20_01018 0.61 -0.5 1,071,258 - MPMX20_01018 0.61 +0.4 1,071,290 - MPMX20_01018 0.63 +0.7 1,071,315 - MPMX20_01018 0.65 -1.6 1,071,315 - MPMX20_01018 0.65 +1.4
Or see this region's nucleotide sequence