Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01017

Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01016 and MPMX20_01017 are separated by 203 nucleotidesMPMX20_01017 and MPMX20_01018 are separated by 32 nucleotides MPMX20_01016: MPMX20_01016 - 2-dehydropantoate 2-reductase, at 1,068,790 to 1,069,701 _01016 MPMX20_01017: MPMX20_01017 - hypothetical protein, at 1,069,905 to 1,070,396 _01017 MPMX20_01018: MPMX20_01018 - Inner membrane transport protein YajR, at 1,070,429 to 1,071,790 _01018 Position (kb) 1069 1070 1071Strain fitness (log2 ratio) -2 -1 0 1 2at 1068.922 kb on + strand, within MPMX20_01016at 1069.018 kb on + strand, within MPMX20_01016at 1069.074 kb on - strand, within MPMX20_01016at 1069.207 kb on - strand, within MPMX20_01016at 1069.207 kb on - strand, within MPMX20_01016at 1069.379 kb on + strand, within MPMX20_01016at 1069.379 kb on + strand, within MPMX20_01016at 1069.422 kb on + strand, within MPMX20_01016at 1069.422 kb on + strand, within MPMX20_01016at 1069.472 kb on + strand, within MPMX20_01016at 1069.484 kb on + strand, within MPMX20_01016at 1069.560 kb on - strand, within MPMX20_01016at 1069.589 kb on - strand, within MPMX20_01016at 1069.597 kb on + strand, within MPMX20_01016at 1069.605 kb on - strand, within MPMX20_01016at 1069.605 kb on - strand, within MPMX20_01016at 1069.618 kb on + strandat 1069.618 kb on + strandat 1069.618 kb on + strandat 1069.618 kb on + strandat 1069.618 kb on + strandat 1069.626 kb on + strandat 1069.626 kb on - strandat 1069.626 kb on - strandat 1069.626 kb on - strandat 1069.655 kb on + strandat 1069.663 kb on - strandat 1069.663 kb on - strandat 1069.673 kb on - strandat 1069.673 kb on - strandat 1069.679 kb on + strandat 1069.687 kb on - strandat 1069.744 kb on + strandat 1069.797 kb on + strandat 1069.801 kb on + strandat 1069.816 kb on + strandat 1069.854 kb on + strandat 1069.866 kb on + strandat 1069.874 kb on - strandat 1070.017 kb on + strand, within MPMX20_01017at 1070.087 kb on + strand, within MPMX20_01017at 1070.111 kb on + strand, within MPMX20_01017at 1070.130 kb on - strand, within MPMX20_01017at 1070.155 kb on + strand, within MPMX20_01017at 1070.213 kb on - strand, within MPMX20_01017at 1070.213 kb on - strand, within MPMX20_01017at 1070.213 kb on - strand, within MPMX20_01017at 1070.213 kb on - strand, within MPMX20_01017at 1070.258 kb on + strand, within MPMX20_01017at 1070.503 kb on + strandat 1070.511 kb on - strandat 1070.801 kb on - strand, within MPMX20_01018at 1070.847 kb on + strand, within MPMX20_01018at 1070.847 kb on - strand, within MPMX20_01018at 1071.065 kb on - strand, within MPMX20_01018at 1071.182 kb on + strand, within MPMX20_01018at 1071.182 kb on + strand, within MPMX20_01018at 1071.190 kb on - strand, within MPMX20_01018at 1071.190 kb on - strand, within MPMX20_01018at 1071.250 kb on + strand, within MPMX20_01018at 1071.250 kb on + strand, within MPMX20_01018at 1071.250 kb on + strand, within MPMX20_01018at 1071.258 kb on - strand, within MPMX20_01018at 1071.258 kb on - strand, within MPMX20_01018at 1071.258 kb on - strand, within MPMX20_01018at 1071.290 kb on - strand, within MPMX20_01018at 1071.315 kb on - strand, within MPMX20_01018at 1071.315 kb on - strand, within MPMX20_01018

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,068,922 + MPMX20_01016 0.14 +0.7
1,069,018 + MPMX20_01016 0.25 +0.1
1,069,074 - MPMX20_01016 0.31 -1.2
1,069,207 - MPMX20_01016 0.46 +0.1
1,069,207 - MPMX20_01016 0.46 +1.7
1,069,379 + MPMX20_01016 0.65 -1.0
1,069,379 + MPMX20_01016 0.65 -0.7
1,069,422 + MPMX20_01016 0.69 +1.1
1,069,422 + MPMX20_01016 0.69 -0.6
1,069,472 + MPMX20_01016 0.75 +1.3
1,069,484 + MPMX20_01016 0.76 -2.0
1,069,560 - MPMX20_01016 0.84 +1.7
1,069,589 - MPMX20_01016 0.88 -0.3
1,069,597 + MPMX20_01016 0.88 +1.1
1,069,605 - MPMX20_01016 0.89 -0.1
1,069,605 - MPMX20_01016 0.89 -1.2
1,069,618 + +0.4
1,069,618 + +0.1
1,069,618 + -0.0
1,069,618 + +0.4
1,069,618 + -0.9
1,069,626 + +2.7
1,069,626 - +0.6
1,069,626 - -0.6
1,069,626 - +1.7
1,069,655 + -1.9
1,069,663 - -0.7
1,069,663 - +2.7
1,069,673 - +0.4
1,069,673 - -0.2
1,069,679 + -0.1
1,069,687 - -0.1
1,069,744 + -0.4
1,069,797 + +0.1
1,069,801 + -0.6
1,069,816 + -0.6
1,069,854 + -1.2
1,069,866 + +0.3
1,069,874 - -1.0
1,070,017 + MPMX20_01017 0.23 -0.5
1,070,087 + MPMX20_01017 0.37 -2.0
1,070,111 + MPMX20_01017 0.42 -2.0
1,070,130 - MPMX20_01017 0.46 -0.3
1,070,155 + MPMX20_01017 0.51 +0.4
1,070,213 - MPMX20_01017 0.63 -1.0
1,070,213 - MPMX20_01017 0.63 -1.0
1,070,213 - MPMX20_01017 0.63 +0.1
1,070,213 - MPMX20_01017 0.63 -1.3
1,070,258 + MPMX20_01017 0.72 -0.6
1,070,503 + +1.7
1,070,511 - -1.5
1,070,801 - MPMX20_01018 0.27 +0.1
1,070,847 + MPMX20_01018 0.31 +0.4
1,070,847 - MPMX20_01018 0.31 -0.7
1,071,065 - MPMX20_01018 0.47 +0.4
1,071,182 + MPMX20_01018 0.55 -0.9
1,071,182 + MPMX20_01018 0.55 -0.5
1,071,190 - MPMX20_01018 0.56 +1.1
1,071,190 - MPMX20_01018 0.56 +1.1
1,071,250 + MPMX20_01018 0.60 +0.4
1,071,250 + MPMX20_01018 0.60 -0.6
1,071,250 + MPMX20_01018 0.60 -1.2
1,071,258 - MPMX20_01018 0.61 -1.4
1,071,258 - MPMX20_01018 0.61 -0.5
1,071,258 - MPMX20_01018 0.61 +0.4
1,071,290 - MPMX20_01018 0.63 +0.7
1,071,315 - MPMX20_01018 0.65 -1.6
1,071,315 - MPMX20_01018 0.65 +1.4

Or see this region's nucleotide sequence