Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00716 and MPMX20_00717 are separated by 111 nucleotides MPMX20_00717 and MPMX20_00718 are separated by 122 nucleotides
MPMX20_00716: MPMX20_00716 - Transaldolase B, at 738,899 to 739,852
_00716
MPMX20_00717: MPMX20_00717 - Molybdopterin adenylyltransferase, at 739,964 to 740,551
_00717
MPMX20_00718: MPMX20_00718 - Proline/betaine transporter, at 740,674 to 741,996
_00718
Position (kb) 739
740
741 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 738.984 kb on - strand at 738.997 kb on + strand, within MPMX20_00716 at 738.997 kb on + strand, within MPMX20_00716 at 739.005 kb on - strand, within MPMX20_00716 at 739.015 kb on + strand, within MPMX20_00716 at 739.079 kb on + strand, within MPMX20_00716 at 739.220 kb on - strand, within MPMX20_00716 at 739.228 kb on - strand, within MPMX20_00716 at 739.353 kb on + strand, within MPMX20_00716 at 739.361 kb on - strand, within MPMX20_00716 at 739.387 kb on + strand, within MPMX20_00716 at 739.442 kb on + strand, within MPMX20_00716 at 739.452 kb on + strand, within MPMX20_00716 at 739.562 kb on - strand, within MPMX20_00716 at 739.576 kb on - strand, within MPMX20_00716 at 739.687 kb on + strand, within MPMX20_00716 at 739.695 kb on - strand, within MPMX20_00716 at 739.712 kb on + strand, within MPMX20_00716 at 739.777 kb on - strand at 739.801 kb on - strand at 739.846 kb on + strand at 739.909 kb on - strand at 739.956 kb on + strand at 739.971 kb on + strand at 739.990 kb on - strand at 739.991 kb on - strand at 740.026 kb on + strand, within MPMX20_00717 at 740.034 kb on - strand, within MPMX20_00717 at 740.034 kb on - strand, within MPMX20_00717 at 740.087 kb on + strand, within MPMX20_00717 at 740.087 kb on + strand, within MPMX20_00717 at 740.173 kb on - strand, within MPMX20_00717 at 740.186 kb on - strand, within MPMX20_00717 at 740.196 kb on - strand, within MPMX20_00717 at 740.196 kb on - strand, within MPMX20_00717 at 740.273 kb on + strand, within MPMX20_00717 at 740.282 kb on + strand, within MPMX20_00717 at 740.291 kb on - strand, within MPMX20_00717 at 740.328 kb on - strand, within MPMX20_00717 at 740.368 kb on + strand, within MPMX20_00717 at 740.462 kb on - strand, within MPMX20_00717 at 740.480 kb on + strand, within MPMX20_00717 at 740.600 kb on - strand at 740.661 kb on - strand at 740.685 kb on + strand at 740.685 kb on + strand at 740.685 kb on + strand at 740.719 kb on - strand at 740.731 kb on + strand at 740.731 kb on + strand at 740.731 kb on + strand at 740.739 kb on - strand at 740.739 kb on - strand at 740.807 kb on - strand, within MPMX20_00718 at 740.818 kb on + strand, within MPMX20_00718 at 740.909 kb on - strand, within MPMX20_00718 at 740.914 kb on - strand, within MPMX20_00718 at 740.956 kb on - strand, within MPMX20_00718 at 741.127 kb on + strand, within MPMX20_00718 at 741.137 kb on + strand, within MPMX20_00718 at 741.179 kb on + strand, within MPMX20_00718 at 741.179 kb on + strand, within MPMX20_00718 at 741.179 kb on + strand, within MPMX20_00718 at 741.184 kb on + strand, within MPMX20_00718 at 741.187 kb on - strand, within MPMX20_00718 at 741.187 kb on - strand, within MPMX20_00718 at 741.187 kb on - strand, within MPMX20_00718 at 741.187 kb on - strand, within MPMX20_00718 at 741.187 kb on - strand, within MPMX20_00718 at 741.204 kb on - strand, within MPMX20_00718 at 741.226 kb on + strand, within MPMX20_00718 at 741.226 kb on + strand, within MPMX20_00718 at 741.234 kb on - strand, within MPMX20_00718 at 741.239 kb on - strand, within MPMX20_00718 at 741.337 kb on - strand, within MPMX20_00718 at 741.347 kb on - strand, within MPMX20_00718 at 741.443 kb on + strand, within MPMX20_00718 at 741.541 kb on - strand, within MPMX20_00718
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_117 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 738,984 - -1.1 738,997 + MPMX20_00716 0.10 -0.3 738,997 + MPMX20_00716 0.10 +0.6 739,005 - MPMX20_00716 0.11 +1.1 739,015 + MPMX20_00716 0.12 -0.4 739,079 + MPMX20_00716 0.19 +1.1 739,220 - MPMX20_00716 0.34 +2.7 739,228 - MPMX20_00716 0.34 -1.1 739,353 + MPMX20_00716 0.48 -0.1 739,361 - MPMX20_00716 0.48 -1.4 739,387 + MPMX20_00716 0.51 -0.4 739,442 + MPMX20_00716 0.57 +0.4 739,452 + MPMX20_00716 0.58 +0.3 739,562 - MPMX20_00716 0.69 +2.7 739,576 - MPMX20_00716 0.71 -0.7 739,687 + MPMX20_00716 0.83 -0.4 739,695 - MPMX20_00716 0.83 -0.3 739,712 + MPMX20_00716 0.85 -0.3 739,777 - +1.1 739,801 - +1.4 739,846 + -0.9 739,909 - +0.1 739,956 + +0.7 739,971 + +1.5 739,990 - +1.2 739,991 - +1.6 740,026 + MPMX20_00717 0.11 +1.3 740,034 - MPMX20_00717 0.12 +1.3 740,034 - MPMX20_00717 0.12 +0.4 740,087 + MPMX20_00717 0.21 +1.5 740,087 + MPMX20_00717 0.21 +1.8 740,173 - MPMX20_00717 0.36 +2.2 740,186 - MPMX20_00717 0.38 +0.6 740,196 - MPMX20_00717 0.39 +0.1 740,196 - MPMX20_00717 0.39 +0.7 740,273 + MPMX20_00717 0.53 +0.7 740,282 + MPMX20_00717 0.54 +2.2 740,291 - MPMX20_00717 0.56 +1.0 740,328 - MPMX20_00717 0.62 +2.5 740,368 + MPMX20_00717 0.69 +1.8 740,462 - MPMX20_00717 0.85 +1.1 740,480 + MPMX20_00717 0.88 +0.6 740,600 - +2.1 740,661 - +1.1 740,685 + -1.0 740,685 + -1.5 740,685 + -0.6 740,719 - -0.7 740,731 + -1.8 740,731 + +0.3 740,731 + -1.3 740,739 - -2.4 740,739 - +0.5 740,807 - MPMX20_00718 0.10 +0.1 740,818 + MPMX20_00718 0.11 +0.1 740,909 - MPMX20_00718 0.18 +0.5 740,914 - MPMX20_00718 0.18 -0.5 740,956 - MPMX20_00718 0.21 +0.7 741,127 + MPMX20_00718 0.34 -0.2 741,137 + MPMX20_00718 0.35 +0.3 741,179 + MPMX20_00718 0.38 +0.3 741,179 + MPMX20_00718 0.38 -0.6 741,179 + MPMX20_00718 0.38 -3.3 741,184 + MPMX20_00718 0.39 -0.2 741,187 - MPMX20_00718 0.39 +1.2 741,187 - MPMX20_00718 0.39 -2.0 741,187 - MPMX20_00718 0.39 +1.7 741,187 - MPMX20_00718 0.39 -2.0 741,187 - MPMX20_00718 0.39 -1.2 741,204 - MPMX20_00718 0.40 +0.2 741,226 + MPMX20_00718 0.42 -0.1 741,226 + MPMX20_00718 0.42 -0.6 741,234 - MPMX20_00718 0.42 +1.7 741,239 - MPMX20_00718 0.43 +2.1 741,337 - MPMX20_00718 0.50 -1.4 741,347 - MPMX20_00718 0.51 +1.5 741,443 + MPMX20_00718 0.58 -0.4 741,541 - MPMX20_00718 0.66 -0.2
Or see this region's nucleotide sequence