Experiment: 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01475 and MPMX20_01476 are separated by 0 nucleotides MPMX20_01476 and MPMX20_01477 are separated by 256 nucleotides
MPMX20_01475: MPMX20_01475 - Aldose sugar dehydrogenase YliI, at 1,546,076 to 1,547,194
_01475
MPMX20_01476: MPMX20_01476 - Glutathione S-transferase GstB, at 1,547,195 to 1,547,821
_01476
MPMX20_01477: MPMX20_01477 - D-alanyl-D-alanine carboxypeptidase DacC, at 1,548,078 to 1,549,283
_01477
Position (kb)
1547
1548 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1546.222 kb on + strand, within MPMX20_01475 at 1546.230 kb on + strand, within MPMX20_01475 at 1546.230 kb on + strand, within MPMX20_01475 at 1546.238 kb on - strand, within MPMX20_01475 at 1546.238 kb on - strand, within MPMX20_01475 at 1546.239 kb on - strand, within MPMX20_01475 at 1546.239 kb on - strand, within MPMX20_01475 at 1546.306 kb on - strand, within MPMX20_01475 at 1546.306 kb on - strand, within MPMX20_01475 at 1546.324 kb on - strand, within MPMX20_01475 at 1546.394 kb on - strand, within MPMX20_01475 at 1546.435 kb on - strand, within MPMX20_01475 at 1546.499 kb on - strand, within MPMX20_01475 at 1546.563 kb on + strand, within MPMX20_01475 at 1546.615 kb on + strand, within MPMX20_01475 at 1546.623 kb on - strand, within MPMX20_01475 at 1546.749 kb on - strand, within MPMX20_01475 at 1546.763 kb on - strand, within MPMX20_01475 at 1546.769 kb on - strand, within MPMX20_01475 at 1546.795 kb on + strand, within MPMX20_01475 at 1546.860 kb on - strand, within MPMX20_01475 at 1546.880 kb on + strand, within MPMX20_01475 at 1546.894 kb on + strand, within MPMX20_01475 at 1546.902 kb on - strand, within MPMX20_01475 at 1546.965 kb on + strand, within MPMX20_01475 at 1546.999 kb on + strand, within MPMX20_01475 at 1547.055 kb on - strand, within MPMX20_01475 at 1547.085 kb on + strand at 1547.093 kb on - strand at 1547.108 kb on + strand at 1547.290 kb on + strand, within MPMX20_01476 at 1547.298 kb on - strand, within MPMX20_01476 at 1547.298 kb on - strand, within MPMX20_01476 at 1547.320 kb on - strand, within MPMX20_01476 at 1547.350 kb on - strand, within MPMX20_01476 at 1547.417 kb on + strand, within MPMX20_01476 at 1547.417 kb on + strand, within MPMX20_01476 at 1547.417 kb on + strand, within MPMX20_01476 at 1547.417 kb on + strand, within MPMX20_01476 at 1547.417 kb on + strand, within MPMX20_01476 at 1547.417 kb on + strand, within MPMX20_01476 at 1547.417 kb on + strand, within MPMX20_01476 at 1547.425 kb on - strand, within MPMX20_01476 at 1547.425 kb on - strand, within MPMX20_01476 at 1547.425 kb on - strand, within MPMX20_01476 at 1547.425 kb on - strand, within MPMX20_01476 at 1547.425 kb on - strand, within MPMX20_01476 at 1547.425 kb on - strand, within MPMX20_01476 at 1547.425 kb on - strand, within MPMX20_01476 at 1547.462 kb on - strand, within MPMX20_01476 at 1547.502 kb on - strand, within MPMX20_01476 at 1547.520 kb on - strand, within MPMX20_01476 at 1547.538 kb on + strand, within MPMX20_01476 at 1547.584 kb on - strand, within MPMX20_01476 at 1547.598 kb on + strand, within MPMX20_01476 at 1547.606 kb on - strand, within MPMX20_01476 at 1547.621 kb on - strand, within MPMX20_01476 at 1547.621 kb on - strand, within MPMX20_01476 at 1547.629 kb on + strand, within MPMX20_01476 at 1547.727 kb on + strand, within MPMX20_01476 at 1547.727 kb on + strand, within MPMX20_01476 at 1547.750 kb on + strand, within MPMX20_01476 at 1547.939 kb on - strand at 1548.015 kb on - strand at 1548.022 kb on - strand at 1548.041 kb on - strand at 1548.068 kb on + strand at 1548.106 kb on + strand at 1548.106 kb on + strand at 1548.114 kb on - strand at 1548.114 kb on - strand at 1548.114 kb on - strand at 1548.210 kb on - strand, within MPMX20_01477 at 1548.279 kb on - strand, within MPMX20_01477 at 1548.298 kb on + strand, within MPMX20_01477 at 1548.298 kb on + strand, within MPMX20_01477 at 1548.298 kb on + strand, within MPMX20_01477 at 1548.306 kb on - strand, within MPMX20_01477 at 1548.306 kb on - strand, within MPMX20_01477 at 1548.393 kb on - strand, within MPMX20_01477 at 1548.498 kb on - strand, within MPMX20_01477 at 1548.584 kb on + strand, within MPMX20_01477 at 1548.601 kb on + strand, within MPMX20_01477 at 1548.609 kb on - strand, within MPMX20_01477 at 1548.609 kb on - strand, within MPMX20_01477 at 1548.609 kb on - strand, within MPMX20_01477 at 1548.620 kb on + strand, within MPMX20_01477 at 1548.620 kb on + strand, within MPMX20_01477 at 1548.620 kb on + strand, within MPMX20_01477 at 1548.620 kb on + strand, within MPMX20_01477 at 1548.628 kb on - strand, within MPMX20_01477 at 1548.628 kb on - strand, within MPMX20_01477 at 1548.645 kb on - strand, within MPMX20_01477 at 1548.662 kb on + strand, within MPMX20_01477 at 1548.757 kb on - strand, within MPMX20_01477 at 1548.807 kb on + strand, within MPMX20_01477
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,546,222 + MPMX20_01475 0.13 -1.2 1,546,230 + MPMX20_01475 0.14 -1.6 1,546,230 + MPMX20_01475 0.14 -1.5 1,546,238 - MPMX20_01475 0.14 -0.1 1,546,238 - MPMX20_01475 0.14 +0.8 1,546,239 - MPMX20_01475 0.15 -0.0 1,546,239 - MPMX20_01475 0.15 -1.0 1,546,306 - MPMX20_01475 0.21 -1.9 1,546,306 - MPMX20_01475 0.21 +0.4 1,546,324 - MPMX20_01475 0.22 +0.5 1,546,394 - MPMX20_01475 0.28 +0.5 1,546,435 - MPMX20_01475 0.32 +0.0 1,546,499 - MPMX20_01475 0.38 -0.3 1,546,563 + MPMX20_01475 0.44 -0.2 1,546,615 + MPMX20_01475 0.48 +0.9 1,546,623 - MPMX20_01475 0.49 +0.3 1,546,749 - MPMX20_01475 0.60 +0.3 1,546,763 - MPMX20_01475 0.61 -0.7 1,546,769 - MPMX20_01475 0.62 +0.1 1,546,795 + MPMX20_01475 0.64 -2.0 1,546,860 - MPMX20_01475 0.70 +0.8 1,546,880 + MPMX20_01475 0.72 -3.4 1,546,894 + MPMX20_01475 0.73 +0.3 1,546,902 - MPMX20_01475 0.74 -0.8 1,546,965 + MPMX20_01475 0.79 +1.4 1,546,999 + MPMX20_01475 0.82 +1.6 1,547,055 - MPMX20_01475 0.87 +0.4 1,547,085 + +0.3 1,547,093 - -1.5 1,547,108 + -0.5 1,547,290 + MPMX20_01476 0.15 +1.3 1,547,298 - MPMX20_01476 0.16 -0.0 1,547,298 - MPMX20_01476 0.16 -0.2 1,547,320 - MPMX20_01476 0.20 -0.6 1,547,350 - MPMX20_01476 0.25 +1.8 1,547,417 + MPMX20_01476 0.35 +0.0 1,547,417 + MPMX20_01476 0.35 +1.1 1,547,417 + MPMX20_01476 0.35 +1.6 1,547,417 + MPMX20_01476 0.35 +1.2 1,547,417 + MPMX20_01476 0.35 +5.0 1,547,417 + MPMX20_01476 0.35 +0.6 1,547,417 + MPMX20_01476 0.35 +0.1 1,547,425 - MPMX20_01476 0.37 -0.7 1,547,425 - MPMX20_01476 0.37 +2.1 1,547,425 - MPMX20_01476 0.37 -1.1 1,547,425 - MPMX20_01476 0.37 +1.7 1,547,425 - MPMX20_01476 0.37 -1.2 1,547,425 - MPMX20_01476 0.37 +0.3 1,547,425 - MPMX20_01476 0.37 +0.5 1,547,462 - MPMX20_01476 0.43 -0.5 1,547,502 - MPMX20_01476 0.49 -0.7 1,547,520 - MPMX20_01476 0.52 +0.9 1,547,538 + MPMX20_01476 0.55 -0.7 1,547,584 - MPMX20_01476 0.62 +0.1 1,547,598 + MPMX20_01476 0.64 -0.3 1,547,606 - MPMX20_01476 0.66 +1.1 1,547,621 - MPMX20_01476 0.68 +0.1 1,547,621 - MPMX20_01476 0.68 +0.9 1,547,629 + MPMX20_01476 0.69 -0.7 1,547,727 + MPMX20_01476 0.85 -0.4 1,547,727 + MPMX20_01476 0.85 +1.1 1,547,750 + MPMX20_01476 0.89 +0.1 1,547,939 - -0.7 1,548,015 - +1.1 1,548,022 - -0.4 1,548,041 - -0.5 1,548,068 + -0.8 1,548,106 + -0.1 1,548,106 + +0.5 1,548,114 - +0.0 1,548,114 - -1.7 1,548,114 - +1.1 1,548,210 - MPMX20_01477 0.11 -0.9 1,548,279 - MPMX20_01477 0.17 -0.2 1,548,298 + MPMX20_01477 0.18 -0.1 1,548,298 + MPMX20_01477 0.18 +0.6 1,548,298 + MPMX20_01477 0.18 -1.2 1,548,306 - MPMX20_01477 0.19 +0.5 1,548,306 - MPMX20_01477 0.19 -0.0 1,548,393 - MPMX20_01477 0.26 +1.1 1,548,498 - MPMX20_01477 0.35 +0.3 1,548,584 + MPMX20_01477 0.42 +0.8 1,548,601 + MPMX20_01477 0.43 +0.7 1,548,609 - MPMX20_01477 0.44 +0.1 1,548,609 - MPMX20_01477 0.44 -0.8 1,548,609 - MPMX20_01477 0.44 -0.2 1,548,620 + MPMX20_01477 0.45 +1.3 1,548,620 + MPMX20_01477 0.45 -0.6 1,548,620 + MPMX20_01477 0.45 -0.3 1,548,620 + MPMX20_01477 0.45 -0.6 1,548,628 - MPMX20_01477 0.46 +0.0 1,548,628 - MPMX20_01477 0.46 -1.5 1,548,645 - MPMX20_01477 0.47 -0.1 1,548,662 + MPMX20_01477 0.48 +1.7 1,548,757 - MPMX20_01477 0.56 +1.4 1,548,807 + MPMX20_01477 0.60 -0.4
Or see this region's nucleotide sequence