Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01476

Experiment: 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01475 and MPMX20_01476 are separated by 0 nucleotidesMPMX20_01476 and MPMX20_01477 are separated by 256 nucleotides MPMX20_01475: MPMX20_01475 - Aldose sugar dehydrogenase YliI, at 1,546,076 to 1,547,194 _01475 MPMX20_01476: MPMX20_01476 - Glutathione S-transferase GstB, at 1,547,195 to 1,547,821 _01476 MPMX20_01477: MPMX20_01477 - D-alanyl-D-alanine carboxypeptidase DacC, at 1,548,078 to 1,549,283 _01477 Position (kb) 1547 1548Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 1546.222 kb on + strand, within MPMX20_01475at 1546.230 kb on + strand, within MPMX20_01475at 1546.230 kb on + strand, within MPMX20_01475at 1546.238 kb on - strand, within MPMX20_01475at 1546.238 kb on - strand, within MPMX20_01475at 1546.239 kb on - strand, within MPMX20_01475at 1546.239 kb on - strand, within MPMX20_01475at 1546.306 kb on - strand, within MPMX20_01475at 1546.306 kb on - strand, within MPMX20_01475at 1546.324 kb on - strand, within MPMX20_01475at 1546.394 kb on - strand, within MPMX20_01475at 1546.435 kb on - strand, within MPMX20_01475at 1546.499 kb on - strand, within MPMX20_01475at 1546.563 kb on + strand, within MPMX20_01475at 1546.615 kb on + strand, within MPMX20_01475at 1546.623 kb on - strand, within MPMX20_01475at 1546.749 kb on - strand, within MPMX20_01475at 1546.763 kb on - strand, within MPMX20_01475at 1546.769 kb on - strand, within MPMX20_01475at 1546.795 kb on + strand, within MPMX20_01475at 1546.860 kb on - strand, within MPMX20_01475at 1546.880 kb on + strand, within MPMX20_01475at 1546.894 kb on + strand, within MPMX20_01475at 1546.902 kb on - strand, within MPMX20_01475at 1546.965 kb on + strand, within MPMX20_01475at 1546.999 kb on + strand, within MPMX20_01475at 1547.055 kb on - strand, within MPMX20_01475at 1547.085 kb on + strandat 1547.093 kb on - strandat 1547.108 kb on + strandat 1547.290 kb on + strand, within MPMX20_01476at 1547.298 kb on - strand, within MPMX20_01476at 1547.298 kb on - strand, within MPMX20_01476at 1547.320 kb on - strand, within MPMX20_01476at 1547.350 kb on - strand, within MPMX20_01476at 1547.417 kb on + strand, within MPMX20_01476at 1547.417 kb on + strand, within MPMX20_01476at 1547.417 kb on + strand, within MPMX20_01476at 1547.417 kb on + strand, within MPMX20_01476at 1547.417 kb on + strand, within MPMX20_01476at 1547.417 kb on + strand, within MPMX20_01476at 1547.417 kb on + strand, within MPMX20_01476at 1547.425 kb on - strand, within MPMX20_01476at 1547.425 kb on - strand, within MPMX20_01476at 1547.425 kb on - strand, within MPMX20_01476at 1547.425 kb on - strand, within MPMX20_01476at 1547.425 kb on - strand, within MPMX20_01476at 1547.425 kb on - strand, within MPMX20_01476at 1547.425 kb on - strand, within MPMX20_01476at 1547.462 kb on - strand, within MPMX20_01476at 1547.502 kb on - strand, within MPMX20_01476at 1547.520 kb on - strand, within MPMX20_01476at 1547.538 kb on + strand, within MPMX20_01476at 1547.584 kb on - strand, within MPMX20_01476at 1547.598 kb on + strand, within MPMX20_01476at 1547.606 kb on - strand, within MPMX20_01476at 1547.621 kb on - strand, within MPMX20_01476at 1547.621 kb on - strand, within MPMX20_01476at 1547.629 kb on + strand, within MPMX20_01476at 1547.727 kb on + strand, within MPMX20_01476at 1547.727 kb on + strand, within MPMX20_01476at 1547.750 kb on + strand, within MPMX20_01476at 1547.939 kb on - strandat 1548.015 kb on - strandat 1548.022 kb on - strandat 1548.041 kb on - strandat 1548.068 kb on + strandat 1548.106 kb on + strandat 1548.106 kb on + strandat 1548.114 kb on - strandat 1548.114 kb on - strandat 1548.114 kb on - strandat 1548.210 kb on - strand, within MPMX20_01477at 1548.279 kb on - strand, within MPMX20_01477at 1548.298 kb on + strand, within MPMX20_01477at 1548.298 kb on + strand, within MPMX20_01477at 1548.298 kb on + strand, within MPMX20_01477at 1548.306 kb on - strand, within MPMX20_01477at 1548.306 kb on - strand, within MPMX20_01477at 1548.393 kb on - strand, within MPMX20_01477at 1548.498 kb on - strand, within MPMX20_01477at 1548.584 kb on + strand, within MPMX20_01477at 1548.601 kb on + strand, within MPMX20_01477at 1548.609 kb on - strand, within MPMX20_01477at 1548.609 kb on - strand, within MPMX20_01477at 1548.609 kb on - strand, within MPMX20_01477at 1548.620 kb on + strand, within MPMX20_01477at 1548.620 kb on + strand, within MPMX20_01477at 1548.620 kb on + strand, within MPMX20_01477at 1548.620 kb on + strand, within MPMX20_01477at 1548.628 kb on - strand, within MPMX20_01477at 1548.628 kb on - strand, within MPMX20_01477at 1548.645 kb on - strand, within MPMX20_01477at 1548.662 kb on + strand, within MPMX20_01477at 1548.757 kb on - strand, within MPMX20_01477at 1548.807 kb on + strand, within MPMX20_01477

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,546,222 + MPMX20_01475 0.13 -1.2
1,546,230 + MPMX20_01475 0.14 -1.6
1,546,230 + MPMX20_01475 0.14 -1.5
1,546,238 - MPMX20_01475 0.14 -0.1
1,546,238 - MPMX20_01475 0.14 +0.8
1,546,239 - MPMX20_01475 0.15 -0.0
1,546,239 - MPMX20_01475 0.15 -1.0
1,546,306 - MPMX20_01475 0.21 -1.9
1,546,306 - MPMX20_01475 0.21 +0.4
1,546,324 - MPMX20_01475 0.22 +0.5
1,546,394 - MPMX20_01475 0.28 +0.5
1,546,435 - MPMX20_01475 0.32 +0.0
1,546,499 - MPMX20_01475 0.38 -0.3
1,546,563 + MPMX20_01475 0.44 -0.2
1,546,615 + MPMX20_01475 0.48 +0.9
1,546,623 - MPMX20_01475 0.49 +0.3
1,546,749 - MPMX20_01475 0.60 +0.3
1,546,763 - MPMX20_01475 0.61 -0.7
1,546,769 - MPMX20_01475 0.62 +0.1
1,546,795 + MPMX20_01475 0.64 -2.0
1,546,860 - MPMX20_01475 0.70 +0.8
1,546,880 + MPMX20_01475 0.72 -3.4
1,546,894 + MPMX20_01475 0.73 +0.3
1,546,902 - MPMX20_01475 0.74 -0.8
1,546,965 + MPMX20_01475 0.79 +1.4
1,546,999 + MPMX20_01475 0.82 +1.6
1,547,055 - MPMX20_01475 0.87 +0.4
1,547,085 + +0.3
1,547,093 - -1.5
1,547,108 + -0.5
1,547,290 + MPMX20_01476 0.15 +1.3
1,547,298 - MPMX20_01476 0.16 -0.0
1,547,298 - MPMX20_01476 0.16 -0.2
1,547,320 - MPMX20_01476 0.20 -0.6
1,547,350 - MPMX20_01476 0.25 +1.8
1,547,417 + MPMX20_01476 0.35 +0.0
1,547,417 + MPMX20_01476 0.35 +1.1
1,547,417 + MPMX20_01476 0.35 +1.6
1,547,417 + MPMX20_01476 0.35 +1.2
1,547,417 + MPMX20_01476 0.35 +5.0
1,547,417 + MPMX20_01476 0.35 +0.6
1,547,417 + MPMX20_01476 0.35 +0.1
1,547,425 - MPMX20_01476 0.37 -0.7
1,547,425 - MPMX20_01476 0.37 +2.1
1,547,425 - MPMX20_01476 0.37 -1.1
1,547,425 - MPMX20_01476 0.37 +1.7
1,547,425 - MPMX20_01476 0.37 -1.2
1,547,425 - MPMX20_01476 0.37 +0.3
1,547,425 - MPMX20_01476 0.37 +0.5
1,547,462 - MPMX20_01476 0.43 -0.5
1,547,502 - MPMX20_01476 0.49 -0.7
1,547,520 - MPMX20_01476 0.52 +0.9
1,547,538 + MPMX20_01476 0.55 -0.7
1,547,584 - MPMX20_01476 0.62 +0.1
1,547,598 + MPMX20_01476 0.64 -0.3
1,547,606 - MPMX20_01476 0.66 +1.1
1,547,621 - MPMX20_01476 0.68 +0.1
1,547,621 - MPMX20_01476 0.68 +0.9
1,547,629 + MPMX20_01476 0.69 -0.7
1,547,727 + MPMX20_01476 0.85 -0.4
1,547,727 + MPMX20_01476 0.85 +1.1
1,547,750 + MPMX20_01476 0.89 +0.1
1,547,939 - -0.7
1,548,015 - +1.1
1,548,022 - -0.4
1,548,041 - -0.5
1,548,068 + -0.8
1,548,106 + -0.1
1,548,106 + +0.5
1,548,114 - +0.0
1,548,114 - -1.7
1,548,114 - +1.1
1,548,210 - MPMX20_01477 0.11 -0.9
1,548,279 - MPMX20_01477 0.17 -0.2
1,548,298 + MPMX20_01477 0.18 -0.1
1,548,298 + MPMX20_01477 0.18 +0.6
1,548,298 + MPMX20_01477 0.18 -1.2
1,548,306 - MPMX20_01477 0.19 +0.5
1,548,306 - MPMX20_01477 0.19 -0.0
1,548,393 - MPMX20_01477 0.26 +1.1
1,548,498 - MPMX20_01477 0.35 +0.3
1,548,584 + MPMX20_01477 0.42 +0.8
1,548,601 + MPMX20_01477 0.43 +0.7
1,548,609 - MPMX20_01477 0.44 +0.1
1,548,609 - MPMX20_01477 0.44 -0.8
1,548,609 - MPMX20_01477 0.44 -0.2
1,548,620 + MPMX20_01477 0.45 +1.3
1,548,620 + MPMX20_01477 0.45 -0.6
1,548,620 + MPMX20_01477 0.45 -0.3
1,548,620 + MPMX20_01477 0.45 -0.6
1,548,628 - MPMX20_01477 0.46 +0.0
1,548,628 - MPMX20_01477 0.46 -1.5
1,548,645 - MPMX20_01477 0.47 -0.1
1,548,662 + MPMX20_01477 0.48 +1.7
1,548,757 - MPMX20_01477 0.56 +1.4
1,548,807 + MPMX20_01477 0.60 -0.4

Or see this region's nucleotide sequence