Experiment: M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03976 and MPMX20_03977 are separated by 271 nucleotides MPMX20_03977 and MPMX20_03978 are separated by 0 nucleotides MPMX20_03978 and MPMX20_03979 are separated by 146 nucleotides
MPMX20_03976: MPMX20_03976 - hypothetical protein, at 4,170,331 to 4,170,906
_03976
MPMX20_03977: MPMX20_03977 - hypothetical protein, at 4,171,178 to 4,172,347
_03977
MPMX20_03978: MPMX20_03978 - NADPH-dependent ferric-chelate reductase, at 4,172,348 to 4,173,112
_03978
MPMX20_03979: MPMX20_03979 - Transcriptional regulator YqjI, at 4,173,259 to 4,173,753
_03979
Position (kb)
4171
4172
4173 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4170.885 kb on + strand at 4170.905 kb on - strand at 4170.913 kb on + strand at 4170.948 kb on + strand at 4170.962 kb on + strand at 4170.962 kb on + strand at 4170.962 kb on + strand at 4170.970 kb on - strand at 4170.975 kb on + strand at 4171.048 kb on + strand at 4171.083 kb on - strand at 4171.132 kb on + strand at 4171.172 kb on + strand at 4171.239 kb on + strand at 4171.484 kb on - strand, within MPMX20_03977 at 4171.519 kb on + strand, within MPMX20_03977 at 4171.540 kb on + strand, within MPMX20_03977 at 4171.591 kb on + strand, within MPMX20_03977 at 4171.675 kb on - strand, within MPMX20_03977 at 4171.793 kb on + strand, within MPMX20_03977 at 4171.910 kb on - strand, within MPMX20_03977 at 4171.922 kb on + strand, within MPMX20_03977 at 4171.955 kb on - strand, within MPMX20_03977 at 4171.966 kb on - strand, within MPMX20_03977 at 4171.970 kb on + strand, within MPMX20_03977 at 4171.971 kb on + strand, within MPMX20_03977 at 4172.053 kb on + strand, within MPMX20_03977 at 4172.089 kb on + strand, within MPMX20_03977 at 4172.094 kb on + strand, within MPMX20_03977 at 4172.173 kb on + strand, within MPMX20_03977 at 4172.173 kb on + strand, within MPMX20_03977 at 4172.218 kb on + strand, within MPMX20_03977 at 4172.238 kb on - strand at 4172.309 kb on + strand at 4172.327 kb on + strand at 4172.335 kb on - strand at 4172.504 kb on - strand, within MPMX20_03978 at 4172.537 kb on - strand, within MPMX20_03978 at 4172.567 kb on + strand, within MPMX20_03978 at 4172.597 kb on - strand, within MPMX20_03978 at 4172.687 kb on + strand, within MPMX20_03978 at 4172.689 kb on - strand, within MPMX20_03978 at 4172.690 kb on - strand, within MPMX20_03978 at 4172.765 kb on - strand, within MPMX20_03978 at 4172.821 kb on + strand, within MPMX20_03978 at 4172.840 kb on + strand, within MPMX20_03978 at 4172.840 kb on + strand, within MPMX20_03978 at 4172.840 kb on + strand, within MPMX20_03978 at 4172.847 kb on + strand, within MPMX20_03978 at 4172.847 kb on + strand, within MPMX20_03978 at 4172.847 kb on + strand, within MPMX20_03978 at 4172.847 kb on + strand, within MPMX20_03978 at 4172.848 kb on - strand, within MPMX20_03978 at 4172.855 kb on - strand, within MPMX20_03978 at 4172.855 kb on - strand, within MPMX20_03978 at 4172.917 kb on + strand, within MPMX20_03978 at 4172.922 kb on - strand, within MPMX20_03978 at 4173.027 kb on + strand, within MPMX20_03978 at 4173.091 kb on - strand at 4173.094 kb on + strand at 4173.114 kb on + strand at 4173.116 kb on - strand at 4173.121 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,170,885 + -1.9 4,170,905 - -0.1 4,170,913 + -1.0 4,170,948 + -2.5 4,170,962 + +0.2 4,170,962 + +0.2 4,170,962 + +0.0 4,170,970 - -0.7 4,170,975 + +2.3 4,171,048 + +1.8 4,171,083 - +1.3 4,171,132 + +0.2 4,171,172 + +0.0 4,171,239 + +0.3 4,171,484 - MPMX20_03977 0.26 -0.6 4,171,519 + MPMX20_03977 0.29 -1.2 4,171,540 + MPMX20_03977 0.31 -1.5 4,171,591 + MPMX20_03977 0.35 +0.0 4,171,675 - MPMX20_03977 0.42 -1.6 4,171,793 + MPMX20_03977 0.53 -1.7 4,171,910 - MPMX20_03977 0.63 -0.1 4,171,922 + MPMX20_03977 0.64 -0.6 4,171,955 - MPMX20_03977 0.66 -0.5 4,171,966 - MPMX20_03977 0.67 -1.5 4,171,970 + MPMX20_03977 0.68 -0.7 4,171,971 + MPMX20_03977 0.68 +1.2 4,172,053 + MPMX20_03977 0.75 -0.2 4,172,089 + MPMX20_03977 0.78 -0.8 4,172,094 + MPMX20_03977 0.78 -0.8 4,172,173 + MPMX20_03977 0.85 +0.8 4,172,173 + MPMX20_03977 0.85 -0.4 4,172,218 + MPMX20_03977 0.89 +1.3 4,172,238 - -2.1 4,172,309 + -0.1 4,172,327 + -1.3 4,172,335 - -0.4 4,172,504 - MPMX20_03978 0.20 +0.8 4,172,537 - MPMX20_03978 0.25 -0.6 4,172,567 + MPMX20_03978 0.29 +0.7 4,172,597 - MPMX20_03978 0.33 +3.0 4,172,687 + MPMX20_03978 0.44 -1.0 4,172,689 - MPMX20_03978 0.45 -0.7 4,172,690 - MPMX20_03978 0.45 +0.0 4,172,765 - MPMX20_03978 0.55 -1.5 4,172,821 + MPMX20_03978 0.62 -1.0 4,172,840 + MPMX20_03978 0.64 +0.0 4,172,840 + MPMX20_03978 0.64 -0.6 4,172,840 + MPMX20_03978 0.64 -0.8 4,172,847 + MPMX20_03978 0.65 +0.3 4,172,847 + MPMX20_03978 0.65 -2.2 4,172,847 + MPMX20_03978 0.65 +0.8 4,172,847 + MPMX20_03978 0.65 +0.1 4,172,848 - MPMX20_03978 0.65 -0.0 4,172,855 - MPMX20_03978 0.66 -0.4 4,172,855 - MPMX20_03978 0.66 -2.6 4,172,917 + MPMX20_03978 0.74 -1.7 4,172,922 - MPMX20_03978 0.75 +0.2 4,173,027 + MPMX20_03978 0.89 +2.0 4,173,091 - -2.7 4,173,094 + -0.0 4,173,114 + +2.6 4,173,116 - -0.8 4,173,121 - +0.5
Or see this region's nucleotide sequence