Experiment: M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02502 and MPMX20_02503 are separated by 399 nucleotides MPMX20_02503 and MPMX20_02504 are separated by 34 nucleotides
MPMX20_02502: MPMX20_02502 - DNA topoisomerase 1, at 2,642,598 to 2,645,195
_02502
MPMX20_02503: MPMX20_02503 - Protein YciN, at 2,645,595 to 2,645,846
_02503
MPMX20_02504: MPMX20_02504 - putative protease SohB, at 2,645,881 to 2,646,927
_02504
Position (kb)
2645
2646 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2645.297 kb on - strand at 2645.310 kb on - strand at 2645.442 kb on - strand at 2645.447 kb on - strand at 2645.512 kb on + strand at 2645.521 kb on - strand at 2645.641 kb on - strand, within MPMX20_02503 at 2645.698 kb on + strand, within MPMX20_02503 at 2645.698 kb on + strand, within MPMX20_02503 at 2645.698 kb on + strand, within MPMX20_02503 at 2645.698 kb on + strand, within MPMX20_02503 at 2645.698 kb on + strand, within MPMX20_02503 at 2645.698 kb on + strand, within MPMX20_02503 at 2645.698 kb on + strand, within MPMX20_02503 at 2645.703 kb on + strand, within MPMX20_02503 at 2645.706 kb on - strand, within MPMX20_02503 at 2645.706 kb on - strand, within MPMX20_02503 at 2645.706 kb on - strand, within MPMX20_02503 at 2645.706 kb on - strand, within MPMX20_02503 at 2645.706 kb on - strand, within MPMX20_02503 at 2645.706 kb on - strand, within MPMX20_02503 at 2645.708 kb on + strand, within MPMX20_02503 at 2645.708 kb on + strand, within MPMX20_02503 at 2645.708 kb on + strand, within MPMX20_02503 at 2645.708 kb on + strand, within MPMX20_02503 at 2645.708 kb on + strand, within MPMX20_02503 at 2645.708 kb on + strand, within MPMX20_02503 at 2645.716 kb on - strand, within MPMX20_02503 at 2645.716 kb on - strand, within MPMX20_02503 at 2645.756 kb on + strand, within MPMX20_02503 at 2645.764 kb on - strand, within MPMX20_02503 at 2645.803 kb on + strand, within MPMX20_02503 at 2645.867 kb on - strand at 2645.867 kb on - strand at 2645.892 kb on - strand at 2645.907 kb on + strand at 2645.972 kb on + strand at 2645.980 kb on - strand at 2645.990 kb on - strand, within MPMX20_02504 at 2645.990 kb on - strand, within MPMX20_02504 at 2646.006 kb on - strand, within MPMX20_02504 at 2646.033 kb on + strand, within MPMX20_02504 at 2646.084 kb on - strand, within MPMX20_02504 at 2646.094 kb on + strand, within MPMX20_02504 at 2646.104 kb on + strand, within MPMX20_02504 at 2646.114 kb on + strand, within MPMX20_02504 at 2646.114 kb on + strand, within MPMX20_02504 at 2646.122 kb on - strand, within MPMX20_02504 at 2646.168 kb on - strand, within MPMX20_02504 at 2646.228 kb on + strand, within MPMX20_02504 at 2646.228 kb on + strand, within MPMX20_02504 at 2646.228 kb on + strand, within MPMX20_02504 at 2646.228 kb on + strand, within MPMX20_02504 at 2646.247 kb on - strand, within MPMX20_02504 at 2646.247 kb on - strand, within MPMX20_02504 at 2646.249 kb on + strand, within MPMX20_02504 at 2646.249 kb on + strand, within MPMX20_02504 at 2646.254 kb on + strand, within MPMX20_02504 at 2646.254 kb on + strand, within MPMX20_02504 at 2646.255 kb on - strand, within MPMX20_02504 at 2646.257 kb on - strand, within MPMX20_02504 at 2646.262 kb on - strand, within MPMX20_02504 at 2646.262 kb on - strand, within MPMX20_02504 at 2646.272 kb on - strand, within MPMX20_02504 at 2646.387 kb on - strand, within MPMX20_02504 at 2646.407 kb on + strand, within MPMX20_02504 at 2646.417 kb on + strand, within MPMX20_02504 at 2646.464 kb on + strand, within MPMX20_02504 at 2646.484 kb on + strand, within MPMX20_02504 at 2646.484 kb on - strand, within MPMX20_02504 at 2646.486 kb on + strand, within MPMX20_02504 at 2646.529 kb on - strand, within MPMX20_02504 at 2646.591 kb on + strand, within MPMX20_02504 at 2646.640 kb on + strand, within MPMX20_02504 at 2646.658 kb on - strand, within MPMX20_02504 at 2646.658 kb on - strand, within MPMX20_02504 at 2646.682 kb on + strand, within MPMX20_02504 at 2646.711 kb on + strand, within MPMX20_02504 at 2646.773 kb on + strand, within MPMX20_02504 at 2646.773 kb on + strand, within MPMX20_02504 at 2646.781 kb on - strand, within MPMX20_02504 at 2646.781 kb on - strand, within MPMX20_02504 at 2646.781 kb on - strand, within MPMX20_02504 at 2646.781 kb on - strand, within MPMX20_02504 at 2646.783 kb on + strand, within MPMX20_02504 at 2646.802 kb on + strand, within MPMX20_02504 at 2646.810 kb on - strand, within MPMX20_02504 at 2646.821 kb on + strand, within MPMX20_02504 at 2646.821 kb on + strand, within MPMX20_02504 at 2646.821 kb on + strand, within MPMX20_02504 at 2646.821 kb on + strand, within MPMX20_02504 at 2646.821 kb on + strand, within MPMX20_02504 at 2646.829 kb on - strand at 2646.829 kb on - strand at 2646.829 kb on - strand at 2646.829 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,645,297 - -1.3 2,645,310 - +0.7 2,645,442 - +0.3 2,645,447 - +0.1 2,645,512 + -1.0 2,645,521 - +0.0 2,645,641 - MPMX20_02503 0.18 -0.3 2,645,698 + MPMX20_02503 0.41 -0.1 2,645,698 + MPMX20_02503 0.41 +0.4 2,645,698 + MPMX20_02503 0.41 -0.4 2,645,698 + MPMX20_02503 0.41 -0.8 2,645,698 + MPMX20_02503 0.41 -1.2 2,645,698 + MPMX20_02503 0.41 +0.2 2,645,698 + MPMX20_02503 0.41 -3.1 2,645,703 + MPMX20_02503 0.43 -0.5 2,645,706 - MPMX20_02503 0.44 -2.0 2,645,706 - MPMX20_02503 0.44 -0.5 2,645,706 - MPMX20_02503 0.44 +0.0 2,645,706 - MPMX20_02503 0.44 -0.9 2,645,706 - MPMX20_02503 0.44 -0.3 2,645,706 - MPMX20_02503 0.44 -0.2 2,645,708 + MPMX20_02503 0.45 -0.7 2,645,708 + MPMX20_02503 0.45 -1.1 2,645,708 + MPMX20_02503 0.45 -1.1 2,645,708 + MPMX20_02503 0.45 -0.9 2,645,708 + MPMX20_02503 0.45 -1.8 2,645,708 + MPMX20_02503 0.45 -1.1 2,645,716 - MPMX20_02503 0.48 -0.5 2,645,716 - MPMX20_02503 0.48 -2.6 2,645,756 + MPMX20_02503 0.64 -0.2 2,645,764 - MPMX20_02503 0.67 -0.7 2,645,803 + MPMX20_02503 0.83 -0.4 2,645,867 - -0.9 2,645,867 - +0.2 2,645,892 - +0.7 2,645,907 + -2.3 2,645,972 + +5.4 2,645,980 - -0.3 2,645,990 - MPMX20_02504 0.10 -1.0 2,645,990 - MPMX20_02504 0.10 -0.3 2,646,006 - MPMX20_02504 0.12 -0.8 2,646,033 + MPMX20_02504 0.15 +0.5 2,646,084 - MPMX20_02504 0.19 -0.3 2,646,094 + MPMX20_02504 0.20 -0.9 2,646,104 + MPMX20_02504 0.21 -1.4 2,646,114 + MPMX20_02504 0.22 +0.5 2,646,114 + MPMX20_02504 0.22 -1.1 2,646,122 - MPMX20_02504 0.23 -1.8 2,646,168 - MPMX20_02504 0.27 +0.1 2,646,228 + MPMX20_02504 0.33 -0.7 2,646,228 + MPMX20_02504 0.33 -1.5 2,646,228 + MPMX20_02504 0.33 -0.6 2,646,228 + MPMX20_02504 0.33 -0.7 2,646,247 - MPMX20_02504 0.35 +0.9 2,646,247 - MPMX20_02504 0.35 +0.3 2,646,249 + MPMX20_02504 0.35 +0.5 2,646,249 + MPMX20_02504 0.35 -0.3 2,646,254 + MPMX20_02504 0.36 -1.0 2,646,254 + MPMX20_02504 0.36 -0.6 2,646,255 - MPMX20_02504 0.36 +0.3 2,646,257 - MPMX20_02504 0.36 -0.5 2,646,262 - MPMX20_02504 0.36 +0.1 2,646,262 - MPMX20_02504 0.36 -0.5 2,646,272 - MPMX20_02504 0.37 -2.2 2,646,387 - MPMX20_02504 0.48 +0.1 2,646,407 + MPMX20_02504 0.50 -0.7 2,646,417 + MPMX20_02504 0.51 -0.7 2,646,464 + MPMX20_02504 0.56 +1.8 2,646,484 + MPMX20_02504 0.58 +0.1 2,646,484 - MPMX20_02504 0.58 +1.3 2,646,486 + MPMX20_02504 0.58 -1.9 2,646,529 - MPMX20_02504 0.62 +0.2 2,646,591 + MPMX20_02504 0.68 +2.6 2,646,640 + MPMX20_02504 0.72 -0.9 2,646,658 - MPMX20_02504 0.74 +1.0 2,646,658 - MPMX20_02504 0.74 -2.5 2,646,682 + MPMX20_02504 0.77 -0.3 2,646,711 + MPMX20_02504 0.79 -0.1 2,646,773 + MPMX20_02504 0.85 -0.5 2,646,773 + MPMX20_02504 0.85 +0.2 2,646,781 - MPMX20_02504 0.86 -0.1 2,646,781 - MPMX20_02504 0.86 +0.5 2,646,781 - MPMX20_02504 0.86 -1.1 2,646,781 - MPMX20_02504 0.86 +0.0 2,646,783 + MPMX20_02504 0.86 +0.5 2,646,802 + MPMX20_02504 0.88 +2.3 2,646,810 - MPMX20_02504 0.89 -0.7 2,646,821 + MPMX20_02504 0.90 -1.3 2,646,821 + MPMX20_02504 0.90 +1.3 2,646,821 + MPMX20_02504 0.90 +0.9 2,646,821 + MPMX20_02504 0.90 +0.2 2,646,821 + MPMX20_02504 0.90 -0.3 2,646,829 - -0.3 2,646,829 - +1.0 2,646,829 - -0.1 2,646,829 - -0.1
Or see this region's nucleotide sequence