Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02503

Experiment: M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02502 and MPMX20_02503 are separated by 399 nucleotidesMPMX20_02503 and MPMX20_02504 are separated by 34 nucleotides MPMX20_02502: MPMX20_02502 - DNA topoisomerase 1, at 2,642,598 to 2,645,195 _02502 MPMX20_02503: MPMX20_02503 - Protein YciN, at 2,645,595 to 2,645,846 _02503 MPMX20_02504: MPMX20_02504 - putative protease SohB, at 2,645,881 to 2,646,927 _02504 Position (kb) 2645 2646Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 2645.297 kb on - strandat 2645.310 kb on - strandat 2645.442 kb on - strandat 2645.447 kb on - strandat 2645.512 kb on + strandat 2645.521 kb on - strandat 2645.641 kb on - strand, within MPMX20_02503at 2645.698 kb on + strand, within MPMX20_02503at 2645.698 kb on + strand, within MPMX20_02503at 2645.698 kb on + strand, within MPMX20_02503at 2645.698 kb on + strand, within MPMX20_02503at 2645.698 kb on + strand, within MPMX20_02503at 2645.698 kb on + strand, within MPMX20_02503at 2645.698 kb on + strand, within MPMX20_02503at 2645.703 kb on + strand, within MPMX20_02503at 2645.706 kb on - strand, within MPMX20_02503at 2645.706 kb on - strand, within MPMX20_02503at 2645.706 kb on - strand, within MPMX20_02503at 2645.706 kb on - strand, within MPMX20_02503at 2645.706 kb on - strand, within MPMX20_02503at 2645.706 kb on - strand, within MPMX20_02503at 2645.708 kb on + strand, within MPMX20_02503at 2645.708 kb on + strand, within MPMX20_02503at 2645.708 kb on + strand, within MPMX20_02503at 2645.708 kb on + strand, within MPMX20_02503at 2645.708 kb on + strand, within MPMX20_02503at 2645.708 kb on + strand, within MPMX20_02503at 2645.716 kb on - strand, within MPMX20_02503at 2645.716 kb on - strand, within MPMX20_02503at 2645.756 kb on + strand, within MPMX20_02503at 2645.764 kb on - strand, within MPMX20_02503at 2645.803 kb on + strand, within MPMX20_02503at 2645.867 kb on - strandat 2645.867 kb on - strandat 2645.892 kb on - strandat 2645.907 kb on + strandat 2645.972 kb on + strandat 2645.980 kb on - strandat 2645.990 kb on - strand, within MPMX20_02504at 2645.990 kb on - strand, within MPMX20_02504at 2646.006 kb on - strand, within MPMX20_02504at 2646.033 kb on + strand, within MPMX20_02504at 2646.084 kb on - strand, within MPMX20_02504at 2646.094 kb on + strand, within MPMX20_02504at 2646.104 kb on + strand, within MPMX20_02504at 2646.114 kb on + strand, within MPMX20_02504at 2646.114 kb on + strand, within MPMX20_02504at 2646.122 kb on - strand, within MPMX20_02504at 2646.168 kb on - strand, within MPMX20_02504at 2646.228 kb on + strand, within MPMX20_02504at 2646.228 kb on + strand, within MPMX20_02504at 2646.228 kb on + strand, within MPMX20_02504at 2646.228 kb on + strand, within MPMX20_02504at 2646.247 kb on - strand, within MPMX20_02504at 2646.247 kb on - strand, within MPMX20_02504at 2646.249 kb on + strand, within MPMX20_02504at 2646.249 kb on + strand, within MPMX20_02504at 2646.254 kb on + strand, within MPMX20_02504at 2646.254 kb on + strand, within MPMX20_02504at 2646.255 kb on - strand, within MPMX20_02504at 2646.257 kb on - strand, within MPMX20_02504at 2646.262 kb on - strand, within MPMX20_02504at 2646.262 kb on - strand, within MPMX20_02504at 2646.272 kb on - strand, within MPMX20_02504at 2646.387 kb on - strand, within MPMX20_02504at 2646.407 kb on + strand, within MPMX20_02504at 2646.417 kb on + strand, within MPMX20_02504at 2646.464 kb on + strand, within MPMX20_02504at 2646.484 kb on + strand, within MPMX20_02504at 2646.484 kb on - strand, within MPMX20_02504at 2646.486 kb on + strand, within MPMX20_02504at 2646.529 kb on - strand, within MPMX20_02504at 2646.591 kb on + strand, within MPMX20_02504at 2646.640 kb on + strand, within MPMX20_02504at 2646.658 kb on - strand, within MPMX20_02504at 2646.658 kb on - strand, within MPMX20_02504at 2646.682 kb on + strand, within MPMX20_02504at 2646.711 kb on + strand, within MPMX20_02504at 2646.773 kb on + strand, within MPMX20_02504at 2646.773 kb on + strand, within MPMX20_02504at 2646.781 kb on - strand, within MPMX20_02504at 2646.781 kb on - strand, within MPMX20_02504at 2646.781 kb on - strand, within MPMX20_02504at 2646.781 kb on - strand, within MPMX20_02504at 2646.783 kb on + strand, within MPMX20_02504at 2646.802 kb on + strand, within MPMX20_02504at 2646.810 kb on - strand, within MPMX20_02504at 2646.821 kb on + strand, within MPMX20_02504at 2646.821 kb on + strand, within MPMX20_02504at 2646.821 kb on + strand, within MPMX20_02504at 2646.821 kb on + strand, within MPMX20_02504at 2646.821 kb on + strand, within MPMX20_02504at 2646.829 kb on - strandat 2646.829 kb on - strandat 2646.829 kb on - strandat 2646.829 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,645,297 - -1.3
2,645,310 - +0.7
2,645,442 - +0.3
2,645,447 - +0.1
2,645,512 + -1.0
2,645,521 - +0.0
2,645,641 - MPMX20_02503 0.18 -0.3
2,645,698 + MPMX20_02503 0.41 -0.1
2,645,698 + MPMX20_02503 0.41 +0.4
2,645,698 + MPMX20_02503 0.41 -0.4
2,645,698 + MPMX20_02503 0.41 -0.8
2,645,698 + MPMX20_02503 0.41 -1.2
2,645,698 + MPMX20_02503 0.41 +0.2
2,645,698 + MPMX20_02503 0.41 -3.1
2,645,703 + MPMX20_02503 0.43 -0.5
2,645,706 - MPMX20_02503 0.44 -2.0
2,645,706 - MPMX20_02503 0.44 -0.5
2,645,706 - MPMX20_02503 0.44 +0.0
2,645,706 - MPMX20_02503 0.44 -0.9
2,645,706 - MPMX20_02503 0.44 -0.3
2,645,706 - MPMX20_02503 0.44 -0.2
2,645,708 + MPMX20_02503 0.45 -0.7
2,645,708 + MPMX20_02503 0.45 -1.1
2,645,708 + MPMX20_02503 0.45 -1.1
2,645,708 + MPMX20_02503 0.45 -0.9
2,645,708 + MPMX20_02503 0.45 -1.8
2,645,708 + MPMX20_02503 0.45 -1.1
2,645,716 - MPMX20_02503 0.48 -0.5
2,645,716 - MPMX20_02503 0.48 -2.6
2,645,756 + MPMX20_02503 0.64 -0.2
2,645,764 - MPMX20_02503 0.67 -0.7
2,645,803 + MPMX20_02503 0.83 -0.4
2,645,867 - -0.9
2,645,867 - +0.2
2,645,892 - +0.7
2,645,907 + -2.3
2,645,972 + +5.4
2,645,980 - -0.3
2,645,990 - MPMX20_02504 0.10 -1.0
2,645,990 - MPMX20_02504 0.10 -0.3
2,646,006 - MPMX20_02504 0.12 -0.8
2,646,033 + MPMX20_02504 0.15 +0.5
2,646,084 - MPMX20_02504 0.19 -0.3
2,646,094 + MPMX20_02504 0.20 -0.9
2,646,104 + MPMX20_02504 0.21 -1.4
2,646,114 + MPMX20_02504 0.22 +0.5
2,646,114 + MPMX20_02504 0.22 -1.1
2,646,122 - MPMX20_02504 0.23 -1.8
2,646,168 - MPMX20_02504 0.27 +0.1
2,646,228 + MPMX20_02504 0.33 -0.7
2,646,228 + MPMX20_02504 0.33 -1.5
2,646,228 + MPMX20_02504 0.33 -0.6
2,646,228 + MPMX20_02504 0.33 -0.7
2,646,247 - MPMX20_02504 0.35 +0.9
2,646,247 - MPMX20_02504 0.35 +0.3
2,646,249 + MPMX20_02504 0.35 +0.5
2,646,249 + MPMX20_02504 0.35 -0.3
2,646,254 + MPMX20_02504 0.36 -1.0
2,646,254 + MPMX20_02504 0.36 -0.6
2,646,255 - MPMX20_02504 0.36 +0.3
2,646,257 - MPMX20_02504 0.36 -0.5
2,646,262 - MPMX20_02504 0.36 +0.1
2,646,262 - MPMX20_02504 0.36 -0.5
2,646,272 - MPMX20_02504 0.37 -2.2
2,646,387 - MPMX20_02504 0.48 +0.1
2,646,407 + MPMX20_02504 0.50 -0.7
2,646,417 + MPMX20_02504 0.51 -0.7
2,646,464 + MPMX20_02504 0.56 +1.8
2,646,484 + MPMX20_02504 0.58 +0.1
2,646,484 - MPMX20_02504 0.58 +1.3
2,646,486 + MPMX20_02504 0.58 -1.9
2,646,529 - MPMX20_02504 0.62 +0.2
2,646,591 + MPMX20_02504 0.68 +2.6
2,646,640 + MPMX20_02504 0.72 -0.9
2,646,658 - MPMX20_02504 0.74 +1.0
2,646,658 - MPMX20_02504 0.74 -2.5
2,646,682 + MPMX20_02504 0.77 -0.3
2,646,711 + MPMX20_02504 0.79 -0.1
2,646,773 + MPMX20_02504 0.85 -0.5
2,646,773 + MPMX20_02504 0.85 +0.2
2,646,781 - MPMX20_02504 0.86 -0.1
2,646,781 - MPMX20_02504 0.86 +0.5
2,646,781 - MPMX20_02504 0.86 -1.1
2,646,781 - MPMX20_02504 0.86 +0.0
2,646,783 + MPMX20_02504 0.86 +0.5
2,646,802 + MPMX20_02504 0.88 +2.3
2,646,810 - MPMX20_02504 0.89 -0.7
2,646,821 + MPMX20_02504 0.90 -1.3
2,646,821 + MPMX20_02504 0.90 +1.3
2,646,821 + MPMX20_02504 0.90 +0.9
2,646,821 + MPMX20_02504 0.90 +0.2
2,646,821 + MPMX20_02504 0.90 -0.3
2,646,829 - -0.3
2,646,829 - +1.0
2,646,829 - -0.1
2,646,829 - -0.1

Or see this region's nucleotide sequence