Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04565

Experiment: 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04564 and MPMX20_04565 are separated by 109 nucleotidesMPMX20_04565 and MPMX20_04566 are separated by 27 nucleotidesMPMX20_04566 and MPMX20_04567 are separated by 37 nucleotides MPMX20_04564: MPMX20_04564 - L-rhamnose isomerase, at 4,776,168 to 4,777,427 _04564 MPMX20_04565: MPMX20_04565 - Rhamnulose-1-phosphate aldolase, at 4,777,537 to 4,778,367 _04565 MPMX20_04566: MPMX20_04566 - L-rhamnose mutarotase, at 4,778,395 to 4,778,709 _04566 MPMX20_04567: MPMX20_04567 - Melibiose permease, at 4,778,747 to 4,780,012 _04567 Position (kb) 4777 4778 4779Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4776.598 kb on + strand, within MPMX20_04564at 4776.598 kb on + strand, within MPMX20_04564at 4776.598 kb on + strand, within MPMX20_04564at 4776.606 kb on - strand, within MPMX20_04564at 4776.606 kb on - strand, within MPMX20_04564at 4776.643 kb on - strand, within MPMX20_04564at 4776.650 kb on + strand, within MPMX20_04564at 4776.650 kb on + strand, within MPMX20_04564at 4776.679 kb on + strand, within MPMX20_04564at 4776.680 kb on - strand, within MPMX20_04564at 4776.700 kb on - strand, within MPMX20_04564at 4776.747 kb on + strand, within MPMX20_04564at 4776.800 kb on - strand, within MPMX20_04564at 4776.838 kb on - strand, within MPMX20_04564at 4776.862 kb on - strand, within MPMX20_04564at 4776.867 kb on - strand, within MPMX20_04564at 4776.880 kb on + strand, within MPMX20_04564at 4776.880 kb on - strand, within MPMX20_04564at 4776.914 kb on - strand, within MPMX20_04564at 4776.998 kb on + strand, within MPMX20_04564at 4777.080 kb on + strand, within MPMX20_04564at 4777.209 kb on + strand, within MPMX20_04564at 4777.365 kb on - strandat 4777.441 kb on - strandat 4777.462 kb on + strandat 4777.470 kb on + strandat 4777.470 kb on + strandat 4777.470 kb on - strandat 4777.480 kb on - strandat 4777.562 kb on - strandat 4777.562 kb on - strandat 4777.572 kb on - strandat 4777.617 kb on + strandat 4777.625 kb on + strand, within MPMX20_04565at 4777.658 kb on + strand, within MPMX20_04565at 4777.666 kb on - strand, within MPMX20_04565at 4777.667 kb on - strand, within MPMX20_04565at 4777.708 kb on - strand, within MPMX20_04565at 4777.802 kb on + strand, within MPMX20_04565at 4777.810 kb on - strand, within MPMX20_04565at 4777.812 kb on + strand, within MPMX20_04565at 4777.837 kb on + strand, within MPMX20_04565at 4777.841 kb on + strand, within MPMX20_04565at 4777.841 kb on + strand, within MPMX20_04565at 4777.845 kb on - strand, within MPMX20_04565at 4777.876 kb on - strand, within MPMX20_04565at 4777.880 kb on + strand, within MPMX20_04565at 4777.880 kb on + strand, within MPMX20_04565at 4777.888 kb on - strand, within MPMX20_04565at 4777.888 kb on - strand, within MPMX20_04565at 4777.888 kb on - strand, within MPMX20_04565at 4777.899 kb on + strand, within MPMX20_04565at 4777.899 kb on + strand, within MPMX20_04565at 4777.899 kb on + strand, within MPMX20_04565at 4777.933 kb on - strand, within MPMX20_04565at 4777.951 kb on + strand, within MPMX20_04565at 4777.981 kb on + strand, within MPMX20_04565at 4777.989 kb on - strand, within MPMX20_04565at 4778.085 kb on + strand, within MPMX20_04565at 4778.116 kb on + strand, within MPMX20_04565at 4778.176 kb on + strand, within MPMX20_04565at 4778.176 kb on + strand, within MPMX20_04565at 4778.184 kb on - strand, within MPMX20_04565at 4778.184 kb on - strand, within MPMX20_04565at 4778.220 kb on - strand, within MPMX20_04565at 4778.245 kb on - strand, within MPMX20_04565at 4778.245 kb on - strand, within MPMX20_04565at 4778.281 kb on - strand, within MPMX20_04565at 4778.415 kb on - strandat 4778.429 kb on - strand, within MPMX20_04566at 4778.457 kb on + strand, within MPMX20_04566at 4778.464 kb on - strand, within MPMX20_04566at 4778.465 kb on - strand, within MPMX20_04566at 4778.471 kb on + strand, within MPMX20_04566at 4778.479 kb on - strand, within MPMX20_04566at 4778.504 kb on - strand, within MPMX20_04566at 4778.511 kb on + strand, within MPMX20_04566at 4778.511 kb on + strand, within MPMX20_04566at 4778.511 kb on + strand, within MPMX20_04566at 4778.519 kb on - strand, within MPMX20_04566at 4778.636 kb on - strand, within MPMX20_04566at 4778.675 kb on + strand, within MPMX20_04566at 4778.703 kb on + strandat 4778.703 kb on + strandat 4778.705 kb on + strandat 4778.711 kb on + strandat 4778.757 kb on - strandat 4778.808 kb on - strandat 4778.816 kb on - strandat 4778.860 kb on + strandat 4778.868 kb on - strandat 4779.041 kb on + strand, within MPMX20_04567at 4779.069 kb on - strand, within MPMX20_04567at 4779.154 kb on + strand, within MPMX20_04567at 4779.299 kb on + strand, within MPMX20_04567at 4779.307 kb on - strand, within MPMX20_04567at 4779.336 kb on - strand, within MPMX20_04567at 4779.352 kb on + strand, within MPMX20_04567at 4779.361 kb on - strand, within MPMX20_04567at 4779.361 kb on - strand, within MPMX20_04567at 4779.361 kb on - strand, within MPMX20_04567at 4779.361 kb on - strand, within MPMX20_04567

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,776,598 + MPMX20_04564 0.34 +1.3
4,776,598 + MPMX20_04564 0.34 +0.6
4,776,598 + MPMX20_04564 0.34 -1.4
4,776,606 - MPMX20_04564 0.35 -0.1
4,776,606 - MPMX20_04564 0.35 +1.0
4,776,643 - MPMX20_04564 0.38 +3.5
4,776,650 + MPMX20_04564 0.38 -0.6
4,776,650 + MPMX20_04564 0.38 +0.2
4,776,679 + MPMX20_04564 0.41 +0.2
4,776,680 - MPMX20_04564 0.41 +0.7
4,776,700 - MPMX20_04564 0.42 +1.4
4,776,747 + MPMX20_04564 0.46 +1.6
4,776,800 - MPMX20_04564 0.50 -1.2
4,776,838 - MPMX20_04564 0.53 +3.5
4,776,862 - MPMX20_04564 0.55 -0.9
4,776,867 - MPMX20_04564 0.55 -0.5
4,776,880 + MPMX20_04564 0.57 -0.2
4,776,880 - MPMX20_04564 0.57 +0.7
4,776,914 - MPMX20_04564 0.59 -0.4
4,776,998 + MPMX20_04564 0.66 +2.5
4,777,080 + MPMX20_04564 0.72 -0.6
4,777,209 + MPMX20_04564 0.83 +0.8
4,777,365 - +0.2
4,777,441 - +0.4
4,777,462 + -1.9
4,777,470 + +1.5
4,777,470 + +0.4
4,777,470 - -0.6
4,777,480 - +0.9
4,777,562 - +0.2
4,777,562 - -0.4
4,777,572 - +1.8
4,777,617 + +0.9
4,777,625 + MPMX20_04565 0.11 -1.2
4,777,658 + MPMX20_04565 0.15 +0.2
4,777,666 - MPMX20_04565 0.16 -0.2
4,777,667 - MPMX20_04565 0.16 -2.5
4,777,708 - MPMX20_04565 0.21 -1.2
4,777,802 + MPMX20_04565 0.32 +0.9
4,777,810 - MPMX20_04565 0.33 -0.9
4,777,812 + MPMX20_04565 0.33 -0.1
4,777,837 + MPMX20_04565 0.36 +0.3
4,777,841 + MPMX20_04565 0.37 -0.9
4,777,841 + MPMX20_04565 0.37 +0.9
4,777,845 - MPMX20_04565 0.37 +0.9
4,777,876 - MPMX20_04565 0.41 +0.5
4,777,880 + MPMX20_04565 0.41 -0.6
4,777,880 + MPMX20_04565 0.41 -0.6
4,777,888 - MPMX20_04565 0.42 -0.9
4,777,888 - MPMX20_04565 0.42 -0.4
4,777,888 - MPMX20_04565 0.42 -0.1
4,777,899 + MPMX20_04565 0.44 -0.9
4,777,899 + MPMX20_04565 0.44 -0.0
4,777,899 + MPMX20_04565 0.44 -0.8
4,777,933 - MPMX20_04565 0.48 -1.4
4,777,951 + MPMX20_04565 0.50 -1.5
4,777,981 + MPMX20_04565 0.53 -0.2
4,777,989 - MPMX20_04565 0.54 -2.8
4,778,085 + MPMX20_04565 0.66 -0.8
4,778,116 + MPMX20_04565 0.70 +0.1
4,778,176 + MPMX20_04565 0.77 -1.2
4,778,176 + MPMX20_04565 0.77 -0.8
4,778,184 - MPMX20_04565 0.78 -0.6
4,778,184 - MPMX20_04565 0.78 -1.7
4,778,220 - MPMX20_04565 0.82 +0.4
4,778,245 - MPMX20_04565 0.85 -0.8
4,778,245 - MPMX20_04565 0.85 -0.6
4,778,281 - MPMX20_04565 0.90 -0.1
4,778,415 - +1.5
4,778,429 - MPMX20_04566 0.11 -1.4
4,778,457 + MPMX20_04566 0.20 +0.6
4,778,464 - MPMX20_04566 0.22 -2.1
4,778,465 - MPMX20_04566 0.22 +0.7
4,778,471 + MPMX20_04566 0.24 -0.8
4,778,479 - MPMX20_04566 0.27 +0.9
4,778,504 - MPMX20_04566 0.35 -1.9
4,778,511 + MPMX20_04566 0.37 +0.5
4,778,511 + MPMX20_04566 0.37 -0.3
4,778,511 + MPMX20_04566 0.37 +0.5
4,778,519 - MPMX20_04566 0.39 -1.6
4,778,636 - MPMX20_04566 0.77 +1.5
4,778,675 + MPMX20_04566 0.89 +1.2
4,778,703 + -0.5
4,778,703 + -1.1
4,778,705 + +0.0
4,778,711 + -2.6
4,778,757 - -1.6
4,778,808 - +0.6
4,778,816 - -0.3
4,778,860 + +0.9
4,778,868 - -1.5
4,779,041 + MPMX20_04567 0.23 +0.5
4,779,069 - MPMX20_04567 0.25 +0.9
4,779,154 + MPMX20_04567 0.32 -0.3
4,779,299 + MPMX20_04567 0.44 +0.3
4,779,307 - MPMX20_04567 0.44 -1.5
4,779,336 - MPMX20_04567 0.47 +2.5
4,779,352 + MPMX20_04567 0.48 -0.9
4,779,361 - MPMX20_04567 0.48 -0.1
4,779,361 - MPMX20_04567 0.48 +0.5
4,779,361 - MPMX20_04567 0.48 +0.5
4,779,361 - MPMX20_04567 0.48 -1.1

Or see this region's nucleotide sequence