Experiment: 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02983 and MPMX20_02984 are separated by 320 nucleotides MPMX20_02984 and MPMX20_02985 are separated by 61 nucleotides MPMX20_02985 and MPMX20_02986 are separated by 191 nucleotides
MPMX20_02983: MPMX20_02983 - HTH-type transcriptional regulator ArgP, at 3,116,033 to 3,116,950
_02983
MPMX20_02984: MPMX20_02984 - tRNA-Asn, at 3,117,271 to 3,117,346
_02984
MPMX20_02985: MPMX20_02985 - putative L,D-transpeptidase ErfK/SrfK, at 3,117,408 to 3,118,307
_02985
MPMX20_02986: MPMX20_02986 - Fosfomycin resistance protein AbaF, at 3,118,499 to 3,119,815
_02986
Position (kb)
3117
3118
3119 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3116.410 kb on + strand, within MPMX20_02983 at 3116.422 kb on + strand, within MPMX20_02983 at 3116.422 kb on + strand, within MPMX20_02983 at 3116.422 kb on + strand, within MPMX20_02983 at 3116.430 kb on - strand, within MPMX20_02983 at 3116.448 kb on + strand, within MPMX20_02983 at 3116.451 kb on - strand, within MPMX20_02983 at 3116.458 kb on - strand, within MPMX20_02983 at 3116.513 kb on - strand, within MPMX20_02983 at 3116.513 kb on - strand, within MPMX20_02983 at 3116.525 kb on - strand, within MPMX20_02983 at 3116.554 kb on + strand, within MPMX20_02983 at 3116.562 kb on - strand, within MPMX20_02983 at 3116.567 kb on + strand, within MPMX20_02983 at 3116.613 kb on + strand, within MPMX20_02983 at 3116.621 kb on - strand, within MPMX20_02983 at 3116.621 kb on - strand, within MPMX20_02983 at 3116.731 kb on + strand, within MPMX20_02983 at 3116.731 kb on + strand, within MPMX20_02983 at 3116.731 kb on + strand, within MPMX20_02983 at 3116.849 kb on - strand, within MPMX20_02983 at 3116.871 kb on + strand at 3116.927 kb on + strand at 3116.938 kb on + strand at 3116.969 kb on - strand at 3117.116 kb on + strand at 3117.144 kb on + strand at 3117.152 kb on - strand at 3117.152 kb on - strand at 3117.152 kb on - strand at 3117.431 kb on + strand at 3117.449 kb on - strand at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.563 kb on + strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.571 kb on - strand, within MPMX20_02985 at 3117.620 kb on + strand, within MPMX20_02985 at 3117.620 kb on + strand, within MPMX20_02985 at 3117.623 kb on + strand, within MPMX20_02985 at 3117.623 kb on + strand, within MPMX20_02985 at 3117.628 kb on - strand, within MPMX20_02985 at 3117.628 kb on - strand, within MPMX20_02985 at 3117.628 kb on - strand, within MPMX20_02985 at 3117.631 kb on - strand, within MPMX20_02985 at 3117.631 kb on - strand, within MPMX20_02985 at 3117.631 kb on - strand, within MPMX20_02985 at 3117.634 kb on - strand, within MPMX20_02985 at 3117.637 kb on + strand, within MPMX20_02985 at 3117.637 kb on + strand, within MPMX20_02985 at 3117.637 kb on + strand, within MPMX20_02985 at 3117.680 kb on + strand, within MPMX20_02985 at 3117.680 kb on + strand, within MPMX20_02985 at 3117.680 kb on + strand, within MPMX20_02985 at 3117.688 kb on - strand, within MPMX20_02985 at 3117.688 kb on - strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.690 kb on + strand, within MPMX20_02985 at 3117.698 kb on - strand, within MPMX20_02985 at 3117.698 kb on - strand, within MPMX20_02985 at 3117.698 kb on - strand, within MPMX20_02985 at 3117.698 kb on - strand, within MPMX20_02985 at 3117.771 kb on - strand, within MPMX20_02985 at 3117.813 kb on - strand, within MPMX20_02985 at 3117.825 kb on - strand, within MPMX20_02985 at 3117.827 kb on + strand, within MPMX20_02985 at 3117.875 kb on - strand, within MPMX20_02985 at 3117.903 kb on - strand, within MPMX20_02985 at 3117.916 kb on + strand, within MPMX20_02985 at 3117.953 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.959 kb on - strand, within MPMX20_02985 at 3117.984 kb on - strand, within MPMX20_02985 at 3118.055 kb on + strand, within MPMX20_02985 at 3118.122 kb on + strand, within MPMX20_02985 at 3118.122 kb on + strand, within MPMX20_02985 at 3118.130 kb on - strand, within MPMX20_02985 at 3118.171 kb on - strand, within MPMX20_02985 at 3118.184 kb on + strand, within MPMX20_02985 at 3118.184 kb on + strand, within MPMX20_02985 at 3118.192 kb on - strand, within MPMX20_02985 at 3118.242 kb on - strand at 3118.242 kb on - strand at 3118.247 kb on + strand at 3118.292 kb on + strand at 3118.315 kb on + strand at 3118.319 kb on + strand at 3118.341 kb on + strand at 3118.349 kb on - strand at 3118.349 kb on - strand at 3118.349 kb on - strand at 3118.349 kb on - strand at 3118.362 kb on - strand at 3118.406 kb on - strand at 3118.410 kb on + strand at 3118.419 kb on + strand at 3118.419 kb on - strand at 3118.441 kb on + strand at 3118.453 kb on + strand at 3118.489 kb on + strand at 3118.491 kb on + strand at 3118.497 kb on - strand at 3118.504 kb on - strand at 3118.504 kb on - strand at 3118.504 kb on - strand at 3118.515 kb on + strand at 3118.515 kb on + strand at 3118.515 kb on + strand at 3118.516 kb on - strand at 3118.523 kb on - strand at 3118.523 kb on - strand at 3118.568 kb on + strand at 3118.576 kb on - strand at 3118.610 kb on - strand at 3118.738 kb on - strand, within MPMX20_02986 at 3118.748 kb on - strand, within MPMX20_02986 at 3118.882 kb on + strand, within MPMX20_02986 at 3118.906 kb on - strand, within MPMX20_02986 at 3118.906 kb on - strand, within MPMX20_02986 at 3118.935 kb on - strand, within MPMX20_02986 at 3119.010 kb on + strand, within MPMX20_02986 at 3119.132 kb on + strand, within MPMX20_02986 at 3119.170 kb on + strand, within MPMX20_02986 at 3119.307 kb on - strand, within MPMX20_02986
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,116,410 + MPMX20_02983 0.41 +0.8 3,116,422 + MPMX20_02983 0.42 -1.5 3,116,422 + MPMX20_02983 0.42 -0.3 3,116,422 + MPMX20_02983 0.42 +0.2 3,116,430 - MPMX20_02983 0.43 -0.1 3,116,448 + MPMX20_02983 0.45 -0.1 3,116,451 - MPMX20_02983 0.46 -0.3 3,116,458 - MPMX20_02983 0.46 -0.3 3,116,513 - MPMX20_02983 0.52 -0.6 3,116,513 - MPMX20_02983 0.52 +0.2 3,116,525 - MPMX20_02983 0.54 -0.4 3,116,554 + MPMX20_02983 0.57 -0.1 3,116,562 - MPMX20_02983 0.58 -0.6 3,116,567 + MPMX20_02983 0.58 -1.4 3,116,613 + MPMX20_02983 0.63 +0.0 3,116,621 - MPMX20_02983 0.64 +0.3 3,116,621 - MPMX20_02983 0.64 +2.2 3,116,731 + MPMX20_02983 0.76 -0.3 3,116,731 + MPMX20_02983 0.76 -1.2 3,116,731 + MPMX20_02983 0.76 -1.1 3,116,849 - MPMX20_02983 0.89 -2.4 3,116,871 + +0.5 3,116,927 + -0.0 3,116,938 + -0.2 3,116,969 - -1.0 3,117,116 + +1.2 3,117,144 + +1.5 3,117,152 - +0.5 3,117,152 - -0.0 3,117,152 - -0.8 3,117,431 + -0.1 3,117,449 - -0.1 3,117,563 + MPMX20_02985 0.17 +0.6 3,117,563 + MPMX20_02985 0.17 -0.6 3,117,563 + MPMX20_02985 0.17 -0.3 3,117,563 + MPMX20_02985 0.17 -2.1 3,117,563 + MPMX20_02985 0.17 +0.2 3,117,563 + MPMX20_02985 0.17 +0.5 3,117,563 + MPMX20_02985 0.17 -2.2 3,117,571 - MPMX20_02985 0.18 -0.1 3,117,571 - MPMX20_02985 0.18 +0.2 3,117,571 - MPMX20_02985 0.18 -0.2 3,117,571 - MPMX20_02985 0.18 +0.7 3,117,571 - MPMX20_02985 0.18 -0.4 3,117,620 + MPMX20_02985 0.24 -1.1 3,117,620 + MPMX20_02985 0.24 -0.6 3,117,623 + MPMX20_02985 0.24 +1.4 3,117,623 + MPMX20_02985 0.24 +0.8 3,117,628 - MPMX20_02985 0.24 +2.3 3,117,628 - MPMX20_02985 0.24 +1.4 3,117,628 - MPMX20_02985 0.24 +3.8 3,117,631 - MPMX20_02985 0.25 +1.8 3,117,631 - MPMX20_02985 0.25 +0.1 3,117,631 - MPMX20_02985 0.25 -0.4 3,117,634 - MPMX20_02985 0.25 +1.2 3,117,637 + MPMX20_02985 0.25 -0.7 3,117,637 + MPMX20_02985 0.25 -0.3 3,117,637 + MPMX20_02985 0.25 +1.4 3,117,680 + MPMX20_02985 0.30 +0.5 3,117,680 + MPMX20_02985 0.30 -1.0 3,117,680 + MPMX20_02985 0.30 -0.4 3,117,688 - MPMX20_02985 0.31 +0.0 3,117,688 - MPMX20_02985 0.31 +1.2 3,117,690 + MPMX20_02985 0.31 +0.1 3,117,690 + MPMX20_02985 0.31 +0.1 3,117,690 + MPMX20_02985 0.31 +0.7 3,117,690 + MPMX20_02985 0.31 +1.1 3,117,690 + MPMX20_02985 0.31 -0.2 3,117,698 - MPMX20_02985 0.32 -2.0 3,117,698 - MPMX20_02985 0.32 +0.4 3,117,698 - MPMX20_02985 0.32 +0.5 3,117,698 - MPMX20_02985 0.32 -0.0 3,117,771 - MPMX20_02985 0.40 -0.9 3,117,813 - MPMX20_02985 0.45 +0.2 3,117,825 - MPMX20_02985 0.46 -0.2 3,117,827 + MPMX20_02985 0.47 +2.2 3,117,875 - MPMX20_02985 0.52 +0.2 3,117,903 - MPMX20_02985 0.55 -0.5 3,117,916 + MPMX20_02985 0.56 -0.2 3,117,953 - MPMX20_02985 0.61 +1.1 3,117,959 - MPMX20_02985 0.61 +1.4 3,117,959 - MPMX20_02985 0.61 -1.1 3,117,959 - MPMX20_02985 0.61 -0.0 3,117,959 - MPMX20_02985 0.61 -0.9 3,117,959 - MPMX20_02985 0.61 +0.2 3,117,959 - MPMX20_02985 0.61 +1.2 3,117,959 - MPMX20_02985 0.61 +0.0 3,117,959 - MPMX20_02985 0.61 -0.5 3,117,984 - MPMX20_02985 0.64 +1.1 3,118,055 + MPMX20_02985 0.72 +0.8 3,118,122 + MPMX20_02985 0.79 -0.8 3,118,122 + MPMX20_02985 0.79 -0.5 3,118,130 - MPMX20_02985 0.80 -1.0 3,118,171 - MPMX20_02985 0.85 +1.0 3,118,184 + MPMX20_02985 0.86 +0.8 3,118,184 + MPMX20_02985 0.86 +1.1 3,118,192 - MPMX20_02985 0.87 +0.8 3,118,242 - +1.6 3,118,242 - -2.7 3,118,247 + +1.8 3,118,292 + -0.2 3,118,315 + +0.4 3,118,319 + -0.9 3,118,341 + +0.0 3,118,349 - +1.2 3,118,349 - +0.1 3,118,349 - +0.0 3,118,349 - +2.1 3,118,362 - +0.8 3,118,406 - -0.6 3,118,410 + +0.0 3,118,419 + -1.4 3,118,419 - -2.1 3,118,441 + +1.8 3,118,453 + +1.6 3,118,489 + -0.0 3,118,491 + -0.5 3,118,497 - +1.8 3,118,504 - -0.2 3,118,504 - -1.6 3,118,504 - -0.8 3,118,515 + -1.1 3,118,515 + +0.7 3,118,515 + -0.3 3,118,516 - -0.7 3,118,523 - +0.3 3,118,523 - +2.2 3,118,568 + -0.9 3,118,576 - +0.5 3,118,610 - +1.0 3,118,738 - MPMX20_02986 0.18 -0.9 3,118,748 - MPMX20_02986 0.19 +0.1 3,118,882 + MPMX20_02986 0.29 -0.4 3,118,906 - MPMX20_02986 0.31 -1.5 3,118,906 - MPMX20_02986 0.31 +0.8 3,118,935 - MPMX20_02986 0.33 -0.3 3,119,010 + MPMX20_02986 0.39 +0.8 3,119,132 + MPMX20_02986 0.48 -2.7 3,119,170 + MPMX20_02986 0.51 +0.8 3,119,307 - MPMX20_02986 0.61 +0.5
Or see this region's nucleotide sequence