Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02985

Experiment: 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02983 and MPMX20_02984 are separated by 320 nucleotidesMPMX20_02984 and MPMX20_02985 are separated by 61 nucleotidesMPMX20_02985 and MPMX20_02986 are separated by 191 nucleotides MPMX20_02983: MPMX20_02983 - HTH-type transcriptional regulator ArgP, at 3,116,033 to 3,116,950 _02983 MPMX20_02984: MPMX20_02984 - tRNA-Asn, at 3,117,271 to 3,117,346 _02984 MPMX20_02985: MPMX20_02985 - putative L,D-transpeptidase ErfK/SrfK, at 3,117,408 to 3,118,307 _02985 MPMX20_02986: MPMX20_02986 - Fosfomycin resistance protein AbaF, at 3,118,499 to 3,119,815 _02986 Position (kb) 3117 3118 3119Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3116.410 kb on + strand, within MPMX20_02983at 3116.422 kb on + strand, within MPMX20_02983at 3116.422 kb on + strand, within MPMX20_02983at 3116.422 kb on + strand, within MPMX20_02983at 3116.430 kb on - strand, within MPMX20_02983at 3116.448 kb on + strand, within MPMX20_02983at 3116.451 kb on - strand, within MPMX20_02983at 3116.458 kb on - strand, within MPMX20_02983at 3116.513 kb on - strand, within MPMX20_02983at 3116.513 kb on - strand, within MPMX20_02983at 3116.525 kb on - strand, within MPMX20_02983at 3116.554 kb on + strand, within MPMX20_02983at 3116.562 kb on - strand, within MPMX20_02983at 3116.567 kb on + strand, within MPMX20_02983at 3116.613 kb on + strand, within MPMX20_02983at 3116.621 kb on - strand, within MPMX20_02983at 3116.621 kb on - strand, within MPMX20_02983at 3116.731 kb on + strand, within MPMX20_02983at 3116.731 kb on + strand, within MPMX20_02983at 3116.731 kb on + strand, within MPMX20_02983at 3116.849 kb on - strand, within MPMX20_02983at 3116.871 kb on + strandat 3116.927 kb on + strandat 3116.938 kb on + strandat 3116.969 kb on - strandat 3117.116 kb on + strandat 3117.144 kb on + strandat 3117.152 kb on - strandat 3117.152 kb on - strandat 3117.152 kb on - strandat 3117.431 kb on + strandat 3117.449 kb on - strandat 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.563 kb on + strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.571 kb on - strand, within MPMX20_02985at 3117.620 kb on + strand, within MPMX20_02985at 3117.620 kb on + strand, within MPMX20_02985at 3117.623 kb on + strand, within MPMX20_02985at 3117.623 kb on + strand, within MPMX20_02985at 3117.628 kb on - strand, within MPMX20_02985at 3117.628 kb on - strand, within MPMX20_02985at 3117.628 kb on - strand, within MPMX20_02985at 3117.631 kb on - strand, within MPMX20_02985at 3117.631 kb on - strand, within MPMX20_02985at 3117.631 kb on - strand, within MPMX20_02985at 3117.634 kb on - strand, within MPMX20_02985at 3117.637 kb on + strand, within MPMX20_02985at 3117.637 kb on + strand, within MPMX20_02985at 3117.637 kb on + strand, within MPMX20_02985at 3117.680 kb on + strand, within MPMX20_02985at 3117.680 kb on + strand, within MPMX20_02985at 3117.680 kb on + strand, within MPMX20_02985at 3117.688 kb on - strand, within MPMX20_02985at 3117.688 kb on - strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.690 kb on + strand, within MPMX20_02985at 3117.698 kb on - strand, within MPMX20_02985at 3117.698 kb on - strand, within MPMX20_02985at 3117.698 kb on - strand, within MPMX20_02985at 3117.698 kb on - strand, within MPMX20_02985at 3117.771 kb on - strand, within MPMX20_02985at 3117.813 kb on - strand, within MPMX20_02985at 3117.825 kb on - strand, within MPMX20_02985at 3117.827 kb on + strand, within MPMX20_02985at 3117.875 kb on - strand, within MPMX20_02985at 3117.903 kb on - strand, within MPMX20_02985at 3117.916 kb on + strand, within MPMX20_02985at 3117.953 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.959 kb on - strand, within MPMX20_02985at 3117.984 kb on - strand, within MPMX20_02985at 3118.055 kb on + strand, within MPMX20_02985at 3118.122 kb on + strand, within MPMX20_02985at 3118.122 kb on + strand, within MPMX20_02985at 3118.130 kb on - strand, within MPMX20_02985at 3118.171 kb on - strand, within MPMX20_02985at 3118.184 kb on + strand, within MPMX20_02985at 3118.184 kb on + strand, within MPMX20_02985at 3118.192 kb on - strand, within MPMX20_02985at 3118.242 kb on - strandat 3118.242 kb on - strandat 3118.247 kb on + strandat 3118.292 kb on + strandat 3118.315 kb on + strandat 3118.319 kb on + strandat 3118.341 kb on + strandat 3118.349 kb on - strandat 3118.349 kb on - strandat 3118.349 kb on - strandat 3118.349 kb on - strandat 3118.362 kb on - strandat 3118.406 kb on - strandat 3118.410 kb on + strandat 3118.419 kb on + strandat 3118.419 kb on - strandat 3118.441 kb on + strandat 3118.453 kb on + strandat 3118.489 kb on + strandat 3118.491 kb on + strandat 3118.497 kb on - strandat 3118.504 kb on - strandat 3118.504 kb on - strandat 3118.504 kb on - strandat 3118.515 kb on + strandat 3118.515 kb on + strandat 3118.515 kb on + strandat 3118.516 kb on - strandat 3118.523 kb on - strandat 3118.523 kb on - strandat 3118.568 kb on + strandat 3118.576 kb on - strandat 3118.610 kb on - strandat 3118.738 kb on - strand, within MPMX20_02986at 3118.748 kb on - strand, within MPMX20_02986at 3118.882 kb on + strand, within MPMX20_02986at 3118.906 kb on - strand, within MPMX20_02986at 3118.906 kb on - strand, within MPMX20_02986at 3118.935 kb on - strand, within MPMX20_02986at 3119.010 kb on + strand, within MPMX20_02986at 3119.132 kb on + strand, within MPMX20_02986at 3119.170 kb on + strand, within MPMX20_02986at 3119.307 kb on - strand, within MPMX20_02986

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,116,410 + MPMX20_02983 0.41 +0.8
3,116,422 + MPMX20_02983 0.42 -1.5
3,116,422 + MPMX20_02983 0.42 -0.3
3,116,422 + MPMX20_02983 0.42 +0.2
3,116,430 - MPMX20_02983 0.43 -0.1
3,116,448 + MPMX20_02983 0.45 -0.1
3,116,451 - MPMX20_02983 0.46 -0.3
3,116,458 - MPMX20_02983 0.46 -0.3
3,116,513 - MPMX20_02983 0.52 -0.6
3,116,513 - MPMX20_02983 0.52 +0.2
3,116,525 - MPMX20_02983 0.54 -0.4
3,116,554 + MPMX20_02983 0.57 -0.1
3,116,562 - MPMX20_02983 0.58 -0.6
3,116,567 + MPMX20_02983 0.58 -1.4
3,116,613 + MPMX20_02983 0.63 +0.0
3,116,621 - MPMX20_02983 0.64 +0.3
3,116,621 - MPMX20_02983 0.64 +2.2
3,116,731 + MPMX20_02983 0.76 -0.3
3,116,731 + MPMX20_02983 0.76 -1.2
3,116,731 + MPMX20_02983 0.76 -1.1
3,116,849 - MPMX20_02983 0.89 -2.4
3,116,871 + +0.5
3,116,927 + -0.0
3,116,938 + -0.2
3,116,969 - -1.0
3,117,116 + +1.2
3,117,144 + +1.5
3,117,152 - +0.5
3,117,152 - -0.0
3,117,152 - -0.8
3,117,431 + -0.1
3,117,449 - -0.1
3,117,563 + MPMX20_02985 0.17 +0.6
3,117,563 + MPMX20_02985 0.17 -0.6
3,117,563 + MPMX20_02985 0.17 -0.3
3,117,563 + MPMX20_02985 0.17 -2.1
3,117,563 + MPMX20_02985 0.17 +0.2
3,117,563 + MPMX20_02985 0.17 +0.5
3,117,563 + MPMX20_02985 0.17 -2.2
3,117,571 - MPMX20_02985 0.18 -0.1
3,117,571 - MPMX20_02985 0.18 +0.2
3,117,571 - MPMX20_02985 0.18 -0.2
3,117,571 - MPMX20_02985 0.18 +0.7
3,117,571 - MPMX20_02985 0.18 -0.4
3,117,620 + MPMX20_02985 0.24 -1.1
3,117,620 + MPMX20_02985 0.24 -0.6
3,117,623 + MPMX20_02985 0.24 +1.4
3,117,623 + MPMX20_02985 0.24 +0.8
3,117,628 - MPMX20_02985 0.24 +2.3
3,117,628 - MPMX20_02985 0.24 +1.4
3,117,628 - MPMX20_02985 0.24 +3.8
3,117,631 - MPMX20_02985 0.25 +1.8
3,117,631 - MPMX20_02985 0.25 +0.1
3,117,631 - MPMX20_02985 0.25 -0.4
3,117,634 - MPMX20_02985 0.25 +1.2
3,117,637 + MPMX20_02985 0.25 -0.7
3,117,637 + MPMX20_02985 0.25 -0.3
3,117,637 + MPMX20_02985 0.25 +1.4
3,117,680 + MPMX20_02985 0.30 +0.5
3,117,680 + MPMX20_02985 0.30 -1.0
3,117,680 + MPMX20_02985 0.30 -0.4
3,117,688 - MPMX20_02985 0.31 +0.0
3,117,688 - MPMX20_02985 0.31 +1.2
3,117,690 + MPMX20_02985 0.31 +0.1
3,117,690 + MPMX20_02985 0.31 +0.1
3,117,690 + MPMX20_02985 0.31 +0.7
3,117,690 + MPMX20_02985 0.31 +1.1
3,117,690 + MPMX20_02985 0.31 -0.2
3,117,698 - MPMX20_02985 0.32 -2.0
3,117,698 - MPMX20_02985 0.32 +0.4
3,117,698 - MPMX20_02985 0.32 +0.5
3,117,698 - MPMX20_02985 0.32 -0.0
3,117,771 - MPMX20_02985 0.40 -0.9
3,117,813 - MPMX20_02985 0.45 +0.2
3,117,825 - MPMX20_02985 0.46 -0.2
3,117,827 + MPMX20_02985 0.47 +2.2
3,117,875 - MPMX20_02985 0.52 +0.2
3,117,903 - MPMX20_02985 0.55 -0.5
3,117,916 + MPMX20_02985 0.56 -0.2
3,117,953 - MPMX20_02985 0.61 +1.1
3,117,959 - MPMX20_02985 0.61 +1.4
3,117,959 - MPMX20_02985 0.61 -1.1
3,117,959 - MPMX20_02985 0.61 -0.0
3,117,959 - MPMX20_02985 0.61 -0.9
3,117,959 - MPMX20_02985 0.61 +0.2
3,117,959 - MPMX20_02985 0.61 +1.2
3,117,959 - MPMX20_02985 0.61 +0.0
3,117,959 - MPMX20_02985 0.61 -0.5
3,117,984 - MPMX20_02985 0.64 +1.1
3,118,055 + MPMX20_02985 0.72 +0.8
3,118,122 + MPMX20_02985 0.79 -0.8
3,118,122 + MPMX20_02985 0.79 -0.5
3,118,130 - MPMX20_02985 0.80 -1.0
3,118,171 - MPMX20_02985 0.85 +1.0
3,118,184 + MPMX20_02985 0.86 +0.8
3,118,184 + MPMX20_02985 0.86 +1.1
3,118,192 - MPMX20_02985 0.87 +0.8
3,118,242 - +1.6
3,118,242 - -2.7
3,118,247 + +1.8
3,118,292 + -0.2
3,118,315 + +0.4
3,118,319 + -0.9
3,118,341 + +0.0
3,118,349 - +1.2
3,118,349 - +0.1
3,118,349 - +0.0
3,118,349 - +2.1
3,118,362 - +0.8
3,118,406 - -0.6
3,118,410 + +0.0
3,118,419 + -1.4
3,118,419 - -2.1
3,118,441 + +1.8
3,118,453 + +1.6
3,118,489 + -0.0
3,118,491 + -0.5
3,118,497 - +1.8
3,118,504 - -0.2
3,118,504 - -1.6
3,118,504 - -0.8
3,118,515 + -1.1
3,118,515 + +0.7
3,118,515 + -0.3
3,118,516 - -0.7
3,118,523 - +0.3
3,118,523 - +2.2
3,118,568 + -0.9
3,118,576 - +0.5
3,118,610 - +1.0
3,118,738 - MPMX20_02986 0.18 -0.9
3,118,748 - MPMX20_02986 0.19 +0.1
3,118,882 + MPMX20_02986 0.29 -0.4
3,118,906 - MPMX20_02986 0.31 -1.5
3,118,906 - MPMX20_02986 0.31 +0.8
3,118,935 - MPMX20_02986 0.33 -0.3
3,119,010 + MPMX20_02986 0.39 +0.8
3,119,132 + MPMX20_02986 0.48 -2.7
3,119,170 + MPMX20_02986 0.51 +0.8
3,119,307 - MPMX20_02986 0.61 +0.5

Or see this region's nucleotide sequence