Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01395

Experiment: 1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01394 and MPMX20_01395 are separated by 91 nucleotidesMPMX20_01395 and MPMX20_01396 are separated by 224 nucleotides MPMX20_01394: MPMX20_01394 - 6-phosphogluconolactonase, at 1,455,821 to 1,456,816 _01394 MPMX20_01395: MPMX20_01395 - Putative acyl-CoA thioester hydrolase YbhC, at 1,456,908 to 1,458,191 _01395 MPMX20_01396: MPMX20_01396 - Imidazolonepropionase, at 1,458,416 to 1,459,639 _01396 Position (kb) 1456 1457 1458 1459Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9at 1455.912 kb on - strandat 1455.912 kb on - strandat 1455.912 kb on - strandat 1455.934 kb on - strand, within MPMX20_01394at 1455.937 kb on + strand, within MPMX20_01394at 1455.963 kb on - strand, within MPMX20_01394at 1456.003 kb on + strand, within MPMX20_01394at 1456.003 kb on + strand, within MPMX20_01394at 1456.011 kb on - strand, within MPMX20_01394at 1456.036 kb on + strand, within MPMX20_01394at 1456.036 kb on + strand, within MPMX20_01394at 1456.036 kb on + strand, within MPMX20_01394at 1456.036 kb on + strand, within MPMX20_01394at 1456.036 kb on + strand, within MPMX20_01394at 1456.044 kb on - strand, within MPMX20_01394at 1456.044 kb on - strand, within MPMX20_01394at 1456.044 kb on - strand, within MPMX20_01394at 1456.044 kb on - strand, within MPMX20_01394at 1456.044 kb on - strand, within MPMX20_01394at 1456.052 kb on - strand, within MPMX20_01394at 1456.068 kb on + strand, within MPMX20_01394at 1456.076 kb on - strand, within MPMX20_01394at 1456.076 kb on - strand, within MPMX20_01394at 1456.080 kb on + strand, within MPMX20_01394at 1456.184 kb on - strand, within MPMX20_01394at 1456.195 kb on + strand, within MPMX20_01394at 1456.203 kb on - strand, within MPMX20_01394at 1456.203 kb on - strand, within MPMX20_01394at 1456.231 kb on + strand, within MPMX20_01394at 1456.233 kb on + strand, within MPMX20_01394at 1456.233 kb on + strand, within MPMX20_01394at 1456.233 kb on + strand, within MPMX20_01394at 1456.234 kb on + strand, within MPMX20_01394at 1456.278 kb on + strand, within MPMX20_01394at 1456.328 kb on - strand, within MPMX20_01394at 1456.349 kb on + strand, within MPMX20_01394at 1456.357 kb on - strand, within MPMX20_01394at 1456.389 kb on + strand, within MPMX20_01394at 1456.403 kb on + strand, within MPMX20_01394at 1456.421 kb on - strand, within MPMX20_01394at 1456.453 kb on + strand, within MPMX20_01394at 1456.461 kb on - strand, within MPMX20_01394at 1456.530 kb on + strand, within MPMX20_01394at 1456.539 kb on + strand, within MPMX20_01394at 1456.547 kb on + strand, within MPMX20_01394at 1456.547 kb on - strand, within MPMX20_01394at 1456.566 kb on + strand, within MPMX20_01394at 1456.566 kb on + strand, within MPMX20_01394at 1456.574 kb on - strand, within MPMX20_01394at 1456.626 kb on + strand, within MPMX20_01394at 1456.773 kb on - strandat 1456.933 kb on + strandat 1456.933 kb on + strandat 1456.936 kb on - strandat 1456.943 kb on + strandat 1456.969 kb on + strandat 1456.969 kb on + strandat 1456.977 kb on - strandat 1456.977 kb on - strandat 1456.983 kb on - strandat 1457.055 kb on - strand, within MPMX20_01395at 1457.068 kb on + strand, within MPMX20_01395at 1457.076 kb on - strand, within MPMX20_01395at 1457.083 kb on - strand, within MPMX20_01395at 1457.093 kb on - strand, within MPMX20_01395at 1457.093 kb on - strand, within MPMX20_01395at 1457.142 kb on + strand, within MPMX20_01395at 1457.150 kb on - strand, within MPMX20_01395at 1457.168 kb on - strand, within MPMX20_01395at 1457.168 kb on - strand, within MPMX20_01395at 1457.189 kb on + strand, within MPMX20_01395at 1457.199 kb on + strand, within MPMX20_01395at 1457.226 kb on - strand, within MPMX20_01395at 1457.226 kb on - strand, within MPMX20_01395at 1457.227 kb on + strand, within MPMX20_01395at 1457.261 kb on - strand, within MPMX20_01395at 1457.261 kb on - strand, within MPMX20_01395at 1457.261 kb on - strand, within MPMX20_01395at 1457.261 kb on - strand, within MPMX20_01395at 1457.336 kb on + strand, within MPMX20_01395at 1457.372 kb on + strand, within MPMX20_01395at 1457.377 kb on - strand, within MPMX20_01395at 1457.387 kb on - strand, within MPMX20_01395at 1457.403 kb on + strand, within MPMX20_01395at 1457.493 kb on - strand, within MPMX20_01395at 1457.495 kb on + strand, within MPMX20_01395at 1457.495 kb on + strand, within MPMX20_01395at 1457.495 kb on + strand, within MPMX20_01395at 1457.495 kb on + strand, within MPMX20_01395at 1457.503 kb on - strand, within MPMX20_01395at 1457.503 kb on - strand, within MPMX20_01395at 1457.503 kb on - strand, within MPMX20_01395at 1457.503 kb on - strand, within MPMX20_01395at 1457.508 kb on + strand, within MPMX20_01395at 1457.511 kb on - strand, within MPMX20_01395at 1457.519 kb on + strand, within MPMX20_01395at 1457.524 kb on + strand, within MPMX20_01395at 1457.612 kb on - strand, within MPMX20_01395at 1457.612 kb on - strand, within MPMX20_01395at 1457.640 kb on - strand, within MPMX20_01395at 1457.676 kb on + strand, within MPMX20_01395at 1457.768 kb on + strand, within MPMX20_01395at 1457.781 kb on - strand, within MPMX20_01395at 1457.781 kb on - strand, within MPMX20_01395at 1457.791 kb on - strand, within MPMX20_01395at 1457.791 kb on - strand, within MPMX20_01395at 1457.845 kb on + strand, within MPMX20_01395at 1457.850 kb on + strand, within MPMX20_01395at 1457.858 kb on - strand, within MPMX20_01395at 1457.913 kb on + strand, within MPMX20_01395at 1457.922 kb on + strand, within MPMX20_01395at 1457.993 kb on - strand, within MPMX20_01395at 1457.995 kb on + strand, within MPMX20_01395at 1457.995 kb on + strand, within MPMX20_01395at 1457.995 kb on + strand, within MPMX20_01395at 1458.001 kb on + strand, within MPMX20_01395at 1458.003 kb on - strand, within MPMX20_01395at 1458.003 kb on - strand, within MPMX20_01395at 1458.023 kb on - strand, within MPMX20_01395at 1458.081 kb on - strandat 1458.100 kb on - strandat 1458.116 kb on + strandat 1458.124 kb on - strandat 1458.124 kb on - strandat 1458.143 kb on + strandat 1458.150 kb on + strandat 1458.191 kb on + strandat 1458.192 kb on + strandat 1458.198 kb on + strandat 1458.198 kb on + strandat 1458.198 kb on + strandat 1458.199 kb on + strandat 1458.206 kb on - strandat 1458.206 kb on - strandat 1458.206 kb on - strandat 1458.289 kb on - strandat 1458.348 kb on - strandat 1458.362 kb on + strandat 1458.422 kb on - strandat 1458.446 kb on - strandat 1458.516 kb on + strandat 1458.516 kb on + strandat 1458.524 kb on - strandat 1458.524 kb on - strandat 1458.588 kb on + strand, within MPMX20_01396at 1458.593 kb on + strand, within MPMX20_01396at 1458.603 kb on + strand, within MPMX20_01396at 1458.615 kb on + strand, within MPMX20_01396at 1458.647 kb on - strand, within MPMX20_01396at 1458.680 kb on - strand, within MPMX20_01396at 1458.680 kb on - strand, within MPMX20_01396at 1458.760 kb on - strand, within MPMX20_01396at 1458.788 kb on + strand, within MPMX20_01396at 1458.796 kb on - strand, within MPMX20_01396at 1458.824 kb on - strand, within MPMX20_01396at 1458.920 kb on + strand, within MPMX20_01396at 1458.928 kb on - strand, within MPMX20_01396at 1458.930 kb on + strand, within MPMX20_01396at 1458.938 kb on - strand, within MPMX20_01396at 1458.999 kb on + strand, within MPMX20_01396at 1459.002 kb on - strand, within MPMX20_01396at 1459.002 kb on - strand, within MPMX20_01396at 1459.012 kb on + strand, within MPMX20_01396at 1459.012 kb on + strand, within MPMX20_01396at 1459.063 kb on - strand, within MPMX20_01396at 1459.078 kb on - strand, within MPMX20_01396at 1459.121 kb on + strand, within MPMX20_01396at 1459.129 kb on - strand, within MPMX20_01396at 1459.186 kb on - strand, within MPMX20_01396

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, Mixed culture; Streptomyces sp. SAI_041 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,455,912 - +0.3
1,455,912 - -0.8
1,455,912 - -1.8
1,455,934 - MPMX20_01394 0.11 +0.1
1,455,937 + MPMX20_01394 0.12 -1.0
1,455,963 - MPMX20_01394 0.14 -0.1
1,456,003 + MPMX20_01394 0.18 +0.1
1,456,003 + MPMX20_01394 0.18 -1.5
1,456,011 - MPMX20_01394 0.19 +1.1
1,456,036 + MPMX20_01394 0.22 -1.1
1,456,036 + MPMX20_01394 0.22 +0.4
1,456,036 + MPMX20_01394 0.22 +1.7
1,456,036 + MPMX20_01394 0.22 +0.1
1,456,036 + MPMX20_01394 0.22 +1.9
1,456,044 - MPMX20_01394 0.22 -1.2
1,456,044 - MPMX20_01394 0.22 +0.1
1,456,044 - MPMX20_01394 0.22 -0.4
1,456,044 - MPMX20_01394 0.22 +0.3
1,456,044 - MPMX20_01394 0.22 -0.5
1,456,052 - MPMX20_01394 0.23 +0.3
1,456,068 + MPMX20_01394 0.25 +0.5
1,456,076 - MPMX20_01394 0.26 +1.7
1,456,076 - MPMX20_01394 0.26 -1.6
1,456,080 + MPMX20_01394 0.26 -0.2
1,456,184 - MPMX20_01394 0.36 -0.5
1,456,195 + MPMX20_01394 0.38 +0.3
1,456,203 - MPMX20_01394 0.38 +0.7
1,456,203 - MPMX20_01394 0.38 +1.7
1,456,231 + MPMX20_01394 0.41 -0.3
1,456,233 + MPMX20_01394 0.41 -0.5
1,456,233 + MPMX20_01394 0.41 +0.1
1,456,233 + MPMX20_01394 0.41 -0.3
1,456,234 + MPMX20_01394 0.41 +0.7
1,456,278 + MPMX20_01394 0.46 -1.3
1,456,328 - MPMX20_01394 0.51 +0.5
1,456,349 + MPMX20_01394 0.53 +0.9
1,456,357 - MPMX20_01394 0.54 -0.4
1,456,389 + MPMX20_01394 0.57 +0.1
1,456,403 + MPMX20_01394 0.58 +1.3
1,456,421 - MPMX20_01394 0.60 -0.1
1,456,453 + MPMX20_01394 0.63 +0.7
1,456,461 - MPMX20_01394 0.64 -0.5
1,456,530 + MPMX20_01394 0.71 -0.8
1,456,539 + MPMX20_01394 0.72 +0.3
1,456,547 + MPMX20_01394 0.73 -1.1
1,456,547 - MPMX20_01394 0.73 -0.1
1,456,566 + MPMX20_01394 0.75 +0.8
1,456,566 + MPMX20_01394 0.75 -0.8
1,456,574 - MPMX20_01394 0.76 -1.2
1,456,626 + MPMX20_01394 0.81 +0.1
1,456,773 - -0.5
1,456,933 + -0.3
1,456,933 + +1.1
1,456,936 - -0.7
1,456,943 + -0.1
1,456,969 + -0.7
1,456,969 + +0.5
1,456,977 - +0.1
1,456,977 - -1.4
1,456,983 - -1.6
1,457,055 - MPMX20_01395 0.11 -0.5
1,457,068 + MPMX20_01395 0.12 +0.1
1,457,076 - MPMX20_01395 0.13 -0.2
1,457,083 - MPMX20_01395 0.14 -0.9
1,457,093 - MPMX20_01395 0.14 +1.1
1,457,093 - MPMX20_01395 0.14 -0.7
1,457,142 + MPMX20_01395 0.18 +0.1
1,457,150 - MPMX20_01395 0.19 -0.2
1,457,168 - MPMX20_01395 0.20 +0.8
1,457,168 - MPMX20_01395 0.20 -0.6
1,457,189 + MPMX20_01395 0.22 -1.4
1,457,199 + MPMX20_01395 0.23 -0.4
1,457,226 - MPMX20_01395 0.25 +1.4
1,457,226 - MPMX20_01395 0.25 +0.1
1,457,227 + MPMX20_01395 0.25 +0.9
1,457,261 - MPMX20_01395 0.27 -0.6
1,457,261 - MPMX20_01395 0.27 +1.1
1,457,261 - MPMX20_01395 0.27 +0.3
1,457,261 - MPMX20_01395 0.27 -0.6
1,457,336 + MPMX20_01395 0.33 -1.3
1,457,372 + MPMX20_01395 0.36 -0.1
1,457,377 - MPMX20_01395 0.37 -0.3
1,457,387 - MPMX20_01395 0.37 +1.1
1,457,403 + MPMX20_01395 0.39 -1.1
1,457,493 - MPMX20_01395 0.46 -1.7
1,457,495 + MPMX20_01395 0.46 +0.2
1,457,495 + MPMX20_01395 0.46 -0.8
1,457,495 + MPMX20_01395 0.46 +0.4
1,457,495 + MPMX20_01395 0.46 -0.9
1,457,503 - MPMX20_01395 0.46 +0.1
1,457,503 - MPMX20_01395 0.46 +0.9
1,457,503 - MPMX20_01395 0.46 +1.7
1,457,503 - MPMX20_01395 0.46 -0.5
1,457,508 + MPMX20_01395 0.47 +2.7
1,457,511 - MPMX20_01395 0.47 -1.9
1,457,519 + MPMX20_01395 0.48 +7.5
1,457,524 + MPMX20_01395 0.48 -1.3
1,457,612 - MPMX20_01395 0.55 -1.7
1,457,612 - MPMX20_01395 0.55 -1.9
1,457,640 - MPMX20_01395 0.57 -0.7
1,457,676 + MPMX20_01395 0.60 -0.1
1,457,768 + MPMX20_01395 0.67 -1.4
1,457,781 - MPMX20_01395 0.68 -2.0
1,457,781 - MPMX20_01395 0.68 -0.5
1,457,791 - MPMX20_01395 0.69 -1.8
1,457,791 - MPMX20_01395 0.69 -0.3
1,457,845 + MPMX20_01395 0.73 -1.9
1,457,850 + MPMX20_01395 0.73 -1.6
1,457,858 - MPMX20_01395 0.74 -0.6
1,457,913 + MPMX20_01395 0.78 +0.1
1,457,922 + MPMX20_01395 0.79 +2.6
1,457,993 - MPMX20_01395 0.85 -1.5
1,457,995 + MPMX20_01395 0.85 -0.7
1,457,995 + MPMX20_01395 0.85 -1.7
1,457,995 + MPMX20_01395 0.85 +0.0
1,458,001 + MPMX20_01395 0.85 +0.9
1,458,003 - MPMX20_01395 0.85 -0.4
1,458,003 - MPMX20_01395 0.85 +0.1
1,458,023 - MPMX20_01395 0.87 +0.3
1,458,081 - +0.1
1,458,100 - -1.7
1,458,116 + -0.9
1,458,124 - -1.2
1,458,124 - -0.1
1,458,143 + -2.1
1,458,150 + -1.9
1,458,191 + +0.9
1,458,192 + +2.0
1,458,198 + -0.8
1,458,198 + +0.0
1,458,198 + -2.1
1,458,199 + -2.3
1,458,206 - -0.3
1,458,206 - +0.2
1,458,206 - -0.2
1,458,289 - -0.2
1,458,348 - -1.0
1,458,362 + +0.1
1,458,422 - -1.5
1,458,446 - -0.4
1,458,516 + +0.3
1,458,516 + -1.1
1,458,524 - +9.6
1,458,524 - -0.9
1,458,588 + MPMX20_01396 0.14 -0.5
1,458,593 + MPMX20_01396 0.14 -1.9
1,458,603 + MPMX20_01396 0.15 +2.1
1,458,615 + MPMX20_01396 0.16 -0.8
1,458,647 - MPMX20_01396 0.19 -0.9
1,458,680 - MPMX20_01396 0.22 +0.8
1,458,680 - MPMX20_01396 0.22 +1.1
1,458,760 - MPMX20_01396 0.28 -1.2
1,458,788 + MPMX20_01396 0.30 -0.3
1,458,796 - MPMX20_01396 0.31 -0.6
1,458,824 - MPMX20_01396 0.33 -2.8
1,458,920 + MPMX20_01396 0.41 -1.7
1,458,928 - MPMX20_01396 0.42 +2.7
1,458,930 + MPMX20_01396 0.42 -0.1
1,458,938 - MPMX20_01396 0.43 +0.3
1,458,999 + MPMX20_01396 0.48 -0.5
1,459,002 - MPMX20_01396 0.48 -0.2
1,459,002 - MPMX20_01396 0.48 -0.9
1,459,012 + MPMX20_01396 0.49 -1.8
1,459,012 + MPMX20_01396 0.49 +1.3
1,459,063 - MPMX20_01396 0.53 +0.4
1,459,078 - MPMX20_01396 0.54 -1.5
1,459,121 + MPMX20_01396 0.58 -0.8
1,459,129 - MPMX20_01396 0.58 +0.4
1,459,186 - MPMX20_01396 0.63 -0.9

Or see this region's nucleotide sequence