Experiment: 0.1X LB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01830 and MPMX20_01831 are separated by 80 nucleotides MPMX20_01831 and MPMX20_01832 are separated by 0 nucleotides MPMX20_01832 and MPMX20_01833 are separated by 151 nucleotides MPMX20_01833 and MPMX20_01834 are separated by 30 nucleotides
MPMX20_01830: MPMX20_01830 - hypothetical protein, at 1,926,135 to 1,926,389
_01830
MPMX20_01831: MPMX20_01831 - hypothetical protein, at 1,926,470 to 1,926,775
_01831
MPMX20_01832: MPMX20_01832 - hypothetical protein, at 1,926,776 to 1,927,120
_01832
MPMX20_01833: MPMX20_01833 - CTP synthase, at 1,927,272 to 1,927,979
_01833
MPMX20_01834: MPMX20_01834 - 2-nitroimidazole transporter, at 1,928,010 to 1,929,197
_01834
Position (kb)
1927
1928 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1926.278 kb on + strand, within MPMX20_01830 at 1926.312 kb on + strand, within MPMX20_01830 at 1926.320 kb on - strand, within MPMX20_01830 at 1926.320 kb on - strand, within MPMX20_01830 at 1926.406 kb on + strand at 1926.406 kb on + strand at 1926.473 kb on - strand at 1926.487 kb on + strand at 1926.557 kb on - strand, within MPMX20_01831 at 1926.568 kb on + strand, within MPMX20_01831 at 1926.576 kb on - strand, within MPMX20_01831 at 1926.576 kb on - strand, within MPMX20_01831 at 1926.576 kb on - strand, within MPMX20_01831 at 1926.629 kb on + strand, within MPMX20_01831 at 1926.659 kb on + strand, within MPMX20_01831 at 1926.667 kb on - strand, within MPMX20_01831 at 1926.758 kb on - strand at 1926.798 kb on + strand at 1926.803 kb on + strand at 1926.806 kb on - strand at 1926.806 kb on - strand at 1926.811 kb on - strand, within MPMX20_01832 at 1926.847 kb on + strand, within MPMX20_01832 at 1926.847 kb on + strand, within MPMX20_01832 at 1926.847 kb on + strand, within MPMX20_01832 at 1926.848 kb on + strand, within MPMX20_01832 at 1926.855 kb on - strand, within MPMX20_01832 at 1926.855 kb on - strand, within MPMX20_01832 at 1926.855 kb on - strand, within MPMX20_01832 at 1926.855 kb on - strand, within MPMX20_01832 at 1926.855 kb on - strand, within MPMX20_01832 at 1926.855 kb on - strand, within MPMX20_01832 at 1926.856 kb on - strand, within MPMX20_01832 at 1926.894 kb on + strand, within MPMX20_01832 at 1926.894 kb on + strand, within MPMX20_01832 at 1926.902 kb on - strand, within MPMX20_01832 at 1926.902 kb on - strand, within MPMX20_01832 at 1926.988 kb on + strand, within MPMX20_01832 at 1927.074 kb on - strand, within MPMX20_01832 at 1927.083 kb on + strand, within MPMX20_01832 at 1927.104 kb on + strand at 1927.104 kb on + strand at 1927.112 kb on - strand at 1927.112 kb on - strand at 1927.171 kb on + strand at 1927.194 kb on - strand at 1927.213 kb on + strand at 1927.220 kb on + strand at 1927.230 kb on + strand at 1927.263 kb on - strand at 1927.280 kb on + strand at 1927.327 kb on + strand at 1927.391 kb on - strand, within MPMX20_01833 at 1927.401 kb on + strand, within MPMX20_01833 at 1927.401 kb on + strand, within MPMX20_01833 at 1927.425 kb on + strand, within MPMX20_01833 at 1927.433 kb on - strand, within MPMX20_01833 at 1927.435 kb on + strand, within MPMX20_01833 at 1927.530 kb on + strand, within MPMX20_01833 at 1927.538 kb on - strand, within MPMX20_01833 at 1927.583 kb on + strand, within MPMX20_01833 at 1927.583 kb on + strand, within MPMX20_01833 at 1927.602 kb on - strand, within MPMX20_01833 at 1927.615 kb on - strand, within MPMX20_01833 at 1927.648 kb on + strand, within MPMX20_01833 at 1927.656 kb on - strand, within MPMX20_01833 at 1927.673 kb on - strand, within MPMX20_01833 at 1927.673 kb on - strand, within MPMX20_01833 at 1927.673 kb on - strand, within MPMX20_01833 at 1927.707 kb on - strand, within MPMX20_01833 at 1927.733 kb on + strand, within MPMX20_01833 at 1927.736 kb on - strand, within MPMX20_01833 at 1927.736 kb on - strand, within MPMX20_01833 at 1927.803 kb on + strand, within MPMX20_01833 at 1927.803 kb on + strand, within MPMX20_01833 at 1927.811 kb on - strand, within MPMX20_01833 at 1927.813 kb on - strand, within MPMX20_01833 at 1927.905 kb on - strand, within MPMX20_01833 at 1927.907 kb on + strand, within MPMX20_01833 at 1927.959 kb on - strand at 1928.025 kb on - strand at 1928.073 kb on + strand at 1928.085 kb on + strand at 1928.085 kb on + strand at 1928.152 kb on - strand, within MPMX20_01834 at 1928.225 kb on + strand, within MPMX20_01834 at 1928.240 kb on + strand, within MPMX20_01834 at 1928.240 kb on + strand, within MPMX20_01834 at 1928.248 kb on - strand, within MPMX20_01834 at 1928.248 kb on - strand, within MPMX20_01834 at 1928.248 kb on - strand, within MPMX20_01834 at 1928.252 kb on + strand, within MPMX20_01834 at 1928.260 kb on - strand, within MPMX20_01834 at 1928.313 kb on + strand, within MPMX20_01834 at 1928.345 kb on + strand, within MPMX20_01834 at 1928.422 kb on + strand, within MPMX20_01834 at 1928.454 kb on + strand, within MPMX20_01834 at 1928.457 kb on - strand, within MPMX20_01834 at 1928.471 kb on + strand, within MPMX20_01834 at 1928.471 kb on + strand, within MPMX20_01834 at 1928.605 kb on - strand, within MPMX20_01834 at 1928.639 kb on + strand, within MPMX20_01834 at 1928.652 kb on - strand, within MPMX20_01834 at 1928.657 kb on - strand, within MPMX20_01834 at 1928.720 kb on - strand, within MPMX20_01834 at 1928.742 kb on + strand, within MPMX20_01834 at 1928.742 kb on + strand, within MPMX20_01834 at 1928.742 kb on + strand, within MPMX20_01834 at 1928.750 kb on - strand, within MPMX20_01834 at 1928.830 kb on + strand, within MPMX20_01834 at 1928.839 kb on + strand, within MPMX20_01834 at 1928.849 kb on + strand, within MPMX20_01834 at 1928.857 kb on - strand, within MPMX20_01834 at 1928.870 kb on + strand, within MPMX20_01834 at 1928.878 kb on - strand, within MPMX20_01834 at 1928.896 kb on + strand, within MPMX20_01834 at 1928.923 kb on - strand, within MPMX20_01834 at 1928.952 kb on - strand, within MPMX20_01834
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,926,278 + MPMX20_01830 0.56 -0.5 1,926,312 + MPMX20_01830 0.69 -1.4 1,926,320 - MPMX20_01830 0.73 +0.2 1,926,320 - MPMX20_01830 0.73 -0.5 1,926,406 + +0.6 1,926,406 + +1.3 1,926,473 - -0.5 1,926,487 + -0.2 1,926,557 - MPMX20_01831 0.28 -1.2 1,926,568 + MPMX20_01831 0.32 -0.8 1,926,576 - MPMX20_01831 0.35 -1.2 1,926,576 - MPMX20_01831 0.35 +0.1 1,926,576 - MPMX20_01831 0.35 +1.6 1,926,629 + MPMX20_01831 0.52 -1.7 1,926,659 + MPMX20_01831 0.62 -0.8 1,926,667 - MPMX20_01831 0.64 -0.8 1,926,758 - -0.9 1,926,798 + -1.5 1,926,803 + +2.0 1,926,806 - +0.1 1,926,806 - -0.6 1,926,811 - MPMX20_01832 0.10 -0.4 1,926,847 + MPMX20_01832 0.21 +0.2 1,926,847 + MPMX20_01832 0.21 +0.6 1,926,847 + MPMX20_01832 0.21 +4.9 1,926,848 + MPMX20_01832 0.21 -0.1 1,926,855 - MPMX20_01832 0.23 +0.7 1,926,855 - MPMX20_01832 0.23 +0.2 1,926,855 - MPMX20_01832 0.23 +0.0 1,926,855 - MPMX20_01832 0.23 -0.3 1,926,855 - MPMX20_01832 0.23 +0.6 1,926,855 - MPMX20_01832 0.23 -0.1 1,926,856 - MPMX20_01832 0.23 -1.7 1,926,894 + MPMX20_01832 0.34 -0.3 1,926,894 + MPMX20_01832 0.34 -0.7 1,926,902 - MPMX20_01832 0.37 +0.6 1,926,902 - MPMX20_01832 0.37 -0.9 1,926,988 + MPMX20_01832 0.61 +1.1 1,927,074 - MPMX20_01832 0.86 -0.7 1,927,083 + MPMX20_01832 0.89 +1.2 1,927,104 + +1.3 1,927,104 + -0.4 1,927,112 - +0.2 1,927,112 - -0.1 1,927,171 + +0.9 1,927,194 - -0.9 1,927,213 + +0.8 1,927,220 + -0.1 1,927,230 + -1.1 1,927,263 - +0.1 1,927,280 + -0.1 1,927,327 + -0.5 1,927,391 - MPMX20_01833 0.17 +0.0 1,927,401 + MPMX20_01833 0.18 -0.0 1,927,401 + MPMX20_01833 0.18 -0.8 1,927,425 + MPMX20_01833 0.22 +0.5 1,927,433 - MPMX20_01833 0.23 -1.4 1,927,435 + MPMX20_01833 0.23 +0.2 1,927,530 + MPMX20_01833 0.36 +2.2 1,927,538 - MPMX20_01833 0.38 -1.8 1,927,583 + MPMX20_01833 0.44 +1.3 1,927,583 + MPMX20_01833 0.44 -0.3 1,927,602 - MPMX20_01833 0.47 +0.3 1,927,615 - MPMX20_01833 0.48 -1.8 1,927,648 + MPMX20_01833 0.53 +0.1 1,927,656 - MPMX20_01833 0.54 -0.1 1,927,673 - MPMX20_01833 0.57 -0.4 1,927,673 - MPMX20_01833 0.57 +0.6 1,927,673 - MPMX20_01833 0.57 +0.8 1,927,707 - MPMX20_01833 0.61 +0.7 1,927,733 + MPMX20_01833 0.65 +0.6 1,927,736 - MPMX20_01833 0.66 +0.2 1,927,736 - MPMX20_01833 0.66 +5.1 1,927,803 + MPMX20_01833 0.75 +0.1 1,927,803 + MPMX20_01833 0.75 +1.0 1,927,811 - MPMX20_01833 0.76 -0.3 1,927,813 - MPMX20_01833 0.76 -0.6 1,927,905 - MPMX20_01833 0.89 -0.8 1,927,907 + MPMX20_01833 0.90 -1.6 1,927,959 - -0.8 1,928,025 - +0.1 1,928,073 + -1.0 1,928,085 + +0.8 1,928,085 + -1.8 1,928,152 - MPMX20_01834 0.12 +0.9 1,928,225 + MPMX20_01834 0.18 +1.9 1,928,240 + MPMX20_01834 0.19 +0.2 1,928,240 + MPMX20_01834 0.19 -0.3 1,928,248 - MPMX20_01834 0.20 -1.7 1,928,248 - MPMX20_01834 0.20 -1.4 1,928,248 - MPMX20_01834 0.20 -0.6 1,928,252 + MPMX20_01834 0.20 +0.5 1,928,260 - MPMX20_01834 0.21 -0.3 1,928,313 + MPMX20_01834 0.26 -1.0 1,928,345 + MPMX20_01834 0.28 -1.3 1,928,422 + MPMX20_01834 0.35 +0.1 1,928,454 + MPMX20_01834 0.37 +0.5 1,928,457 - MPMX20_01834 0.38 -0.6 1,928,471 + MPMX20_01834 0.39 -0.3 1,928,471 + MPMX20_01834 0.39 -0.4 1,928,605 - MPMX20_01834 0.50 -1.3 1,928,639 + MPMX20_01834 0.53 -0.6 1,928,652 - MPMX20_01834 0.54 +0.0 1,928,657 - MPMX20_01834 0.54 +1.1 1,928,720 - MPMX20_01834 0.60 -0.2 1,928,742 + MPMX20_01834 0.62 +1.6 1,928,742 + MPMX20_01834 0.62 +0.1 1,928,742 + MPMX20_01834 0.62 -0.9 1,928,750 - MPMX20_01834 0.62 -0.9 1,928,830 + MPMX20_01834 0.69 -0.7 1,928,839 + MPMX20_01834 0.70 -0.0 1,928,849 + MPMX20_01834 0.71 -0.6 1,928,857 - MPMX20_01834 0.71 +0.7 1,928,870 + MPMX20_01834 0.72 -0.8 1,928,878 - MPMX20_01834 0.73 +0.8 1,928,896 + MPMX20_01834 0.75 +0.4 1,928,923 - MPMX20_01834 0.77 -0.3 1,928,952 - MPMX20_01834 0.79 -1.8
Or see this region's nucleotide sequence