Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00102

Experiment: 0.1X LB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00100 and MPMX20_00101 are separated by 2 nucleotidesMPMX20_00101 and MPMX20_00102 are separated by 3 nucleotidesMPMX20_00102 and MPMX20_00103 overlap by 1 nucleotides MPMX20_00100: MPMX20_00100 - Formamidopyrimidine-DNA glycosylase, at 101,059 to 101,868 _00100 MPMX20_00101: MPMX20_00101 - Phosphopantetheine adenylyltransferase, at 101,871 to 102,350 _00101 MPMX20_00102: MPMX20_00102 - hypothetical protein, at 102,354 to 103,124 _00102 MPMX20_00103: MPMX20_00103 - 3-deoxy-D-manno-octulosonic acid transferase, at 103,124 to 104,398 _00103 Position (kb) 102 103 104Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 101.367 kb on + strand, within MPMX20_00100at 101.367 kb on + strand, within MPMX20_00100at 101.367 kb on + strand, within MPMX20_00100at 101.367 kb on + strand, within MPMX20_00100at 101.367 kb on + strand, within MPMX20_00100at 101.370 kb on - strand, within MPMX20_00100at 101.372 kb on + strand, within MPMX20_00100at 101.375 kb on - strand, within MPMX20_00100at 101.375 kb on - strand, within MPMX20_00100at 101.415 kb on + strand, within MPMX20_00100at 101.422 kb on + strand, within MPMX20_00100at 101.431 kb on + strand, within MPMX20_00100at 101.442 kb on + strand, within MPMX20_00100at 101.447 kb on + strand, within MPMX20_00100at 101.447 kb on + strand, within MPMX20_00100at 101.452 kb on + strand, within MPMX20_00100at 101.488 kb on + strand, within MPMX20_00100at 101.598 kb on + strand, within MPMX20_00100at 101.630 kb on + strand, within MPMX20_00100at 101.632 kb on + strand, within MPMX20_00100at 101.638 kb on - strand, within MPMX20_00100at 101.638 kb on - strand, within MPMX20_00100at 101.639 kb on + strand, within MPMX20_00100at 101.640 kb on - strand, within MPMX20_00100at 101.642 kb on - strand, within MPMX20_00100at 101.660 kb on - strand, within MPMX20_00100at 101.671 kb on + strand, within MPMX20_00100at 101.679 kb on - strand, within MPMX20_00100at 101.692 kb on - strand, within MPMX20_00100at 101.692 kb on - strand, within MPMX20_00100at 101.705 kb on + strand, within MPMX20_00100at 101.713 kb on - strand, within MPMX20_00100at 101.784 kb on + strand, within MPMX20_00100at 101.844 kb on + strandat 102.393 kb on - strandat 102.420 kb on - strandat 102.577 kb on - strand, within MPMX20_00102at 102.748 kb on - strand, within MPMX20_00102at 102.791 kb on + strand, within MPMX20_00102at 102.791 kb on + strand, within MPMX20_00102at 102.798 kb on + strand, within MPMX20_00102at 102.798 kb on + strand, within MPMX20_00102at 102.806 kb on - strand, within MPMX20_00102at 102.867 kb on - strand, within MPMX20_00102at 102.867 kb on - strand, within MPMX20_00102at 102.880 kb on - strand, within MPMX20_00102at 102.880 kb on - strand, within MPMX20_00102at 102.907 kb on + strand, within MPMX20_00102at 102.915 kb on - strand, within MPMX20_00102at 102.915 kb on - strand, within MPMX20_00102at 102.961 kb on + strand, within MPMX20_00102at 103.107 kb on + strandat 103.138 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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101,367 + MPMX20_00100 0.38 +0.1
101,367 + MPMX20_00100 0.38 -0.2
101,367 + MPMX20_00100 0.38 +0.1
101,367 + MPMX20_00100 0.38 -0.6
101,367 + MPMX20_00100 0.38 +0.2
101,370 - MPMX20_00100 0.38 -1.4
101,372 + MPMX20_00100 0.39 -1.9
101,375 - MPMX20_00100 0.39 +0.7
101,375 - MPMX20_00100 0.39 -0.7
101,415 + MPMX20_00100 0.44 -0.3
101,422 + MPMX20_00100 0.45 -2.2
101,431 + MPMX20_00100 0.46 +2.2
101,442 + MPMX20_00100 0.47 +1.3
101,447 + MPMX20_00100 0.48 +1.0
101,447 + MPMX20_00100 0.48 +0.6
101,452 + MPMX20_00100 0.49 -1.3
101,488 + MPMX20_00100 0.53 +0.7
101,598 + MPMX20_00100 0.67 -2.2
101,630 + MPMX20_00100 0.70 -0.3
101,632 + MPMX20_00100 0.71 -1.4
101,638 - MPMX20_00100 0.71 -1.1
101,638 - MPMX20_00100 0.71 +1.7
101,639 + MPMX20_00100 0.72 -0.7
101,640 - MPMX20_00100 0.72 -0.3
101,642 - MPMX20_00100 0.72 +0.4
101,660 - MPMX20_00100 0.74 -0.4
101,671 + MPMX20_00100 0.76 +0.8
101,679 - MPMX20_00100 0.77 +0.3
101,692 - MPMX20_00100 0.78 +0.7
101,692 - MPMX20_00100 0.78 +1.7
101,705 + MPMX20_00100 0.80 -1.6
101,713 - MPMX20_00100 0.81 -0.7
101,784 + MPMX20_00100 0.90 -0.2
101,844 + -1.6
102,393 - -3.0
102,420 - -1.6
102,577 - MPMX20_00102 0.29 -2.0
102,748 - MPMX20_00102 0.51 -0.9
102,791 + MPMX20_00102 0.57 -0.3
102,791 + MPMX20_00102 0.57 -0.6
102,798 + MPMX20_00102 0.58 -1.5
102,798 + MPMX20_00102 0.58 -1.1
102,806 - MPMX20_00102 0.59 -2.0
102,867 - MPMX20_00102 0.67 +0.1
102,867 - MPMX20_00102 0.67 -1.5
102,880 - MPMX20_00102 0.68 -1.3
102,880 - MPMX20_00102 0.68 -1.1
102,907 + MPMX20_00102 0.72 +0.7
102,915 - MPMX20_00102 0.73 -1.9
102,915 - MPMX20_00102 0.73 -2.0
102,961 + MPMX20_00102 0.79 +0.7
103,107 + +0.7
103,138 - -1.6

Or see this region's nucleotide sequence