Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04455 and MPMX20_04456 are separated by 109 nucleotides MPMX20_04456 and MPMX20_04457 overlap by 4 nucleotides MPMX20_04457 and MPMX20_04458 are separated by 61 nucleotides
MPMX20_04455: MPMX20_04455 - Lysophospholipase L2, at 4,658,471 to 4,659,463
_04455
MPMX20_04456: MPMX20_04456 - Homoserine/homoserine lactone efflux protein, at 4,659,573 to 4,660,193
_04456
MPMX20_04457: MPMX20_04457 - Threonine efflux protein, at 4,660,190 to 4,660,810
_04457
MPMX20_04458: MPMX20_04458 - ATP-dependent DNA helicase RecQ, at 4,660,872 to 4,662,764
_04458
Position (kb)
4660
4661 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4659.222 kb on - strand, within MPMX20_04455 at 4659.235 kb on + strand, within MPMX20_04455 at 4659.243 kb on - strand, within MPMX20_04455 at 4659.243 kb on - strand, within MPMX20_04455 at 4659.285 kb on - strand, within MPMX20_04455 at 4659.285 kb on - strand, within MPMX20_04455 at 4659.577 kb on + strand at 4659.616 kb on + strand at 4659.616 kb on + strand at 4659.624 kb on - strand at 4659.624 kb on - strand at 4659.624 kb on - strand at 4659.624 kb on - strand at 4659.625 kb on - strand at 4659.717 kb on + strand, within MPMX20_04456 at 4659.753 kb on - strand, within MPMX20_04456 at 4659.785 kb on - strand, within MPMX20_04456 at 4659.785 kb on - strand, within MPMX20_04456 at 4659.797 kb on + strand, within MPMX20_04456 at 4659.832 kb on + strand, within MPMX20_04456 at 4659.840 kb on - strand, within MPMX20_04456 at 4659.845 kb on - strand, within MPMX20_04456 at 4659.927 kb on + strand, within MPMX20_04456 at 4659.935 kb on - strand, within MPMX20_04456 at 4659.985 kb on - strand, within MPMX20_04456 at 4660.002 kb on - strand, within MPMX20_04456 at 4660.003 kb on - strand, within MPMX20_04456 at 4660.003 kb on - strand, within MPMX20_04456 at 4660.003 kb on - strand, within MPMX20_04456 at 4660.092 kb on - strand, within MPMX20_04456 at 4660.096 kb on + strand, within MPMX20_04456 at 4660.104 kb on - strand, within MPMX20_04456 at 4660.105 kb on + strand, within MPMX20_04456 at 4660.123 kb on - strand, within MPMX20_04456 at 4660.123 kb on - strand, within MPMX20_04456 at 4660.130 kb on - strand, within MPMX20_04456 at 4660.165 kb on - strand at 4660.275 kb on + strand, within MPMX20_04457 at 4660.295 kb on + strand, within MPMX20_04457 at 4660.322 kb on - strand, within MPMX20_04457 at 4660.323 kb on - strand, within MPMX20_04457 at 4660.356 kb on - strand, within MPMX20_04457 at 4660.356 kb on - strand, within MPMX20_04457 at 4660.377 kb on + strand, within MPMX20_04457 at 4660.385 kb on - strand, within MPMX20_04457 at 4660.487 kb on - strand, within MPMX20_04457 at 4660.543 kb on - strand, within MPMX20_04457 at 4660.551 kb on - strand, within MPMX20_04457 at 4660.581 kb on - strand, within MPMX20_04457 at 4660.627 kb on + strand, within MPMX20_04457 at 4660.765 kb on + strand at 4660.765 kb on + strand at 4660.768 kb on - strand at 4660.772 kb on + strand at 4660.773 kb on - strand at 4660.780 kb on - strand at 4660.890 kb on + strand at 4660.898 kb on - strand at 4660.898 kb on - strand at 4660.922 kb on - strand at 4660.949 kb on + strand at 4661.076 kb on - strand, within MPMX20_04458 at 4661.076 kb on - strand, within MPMX20_04458 at 4661.076 kb on - strand, within MPMX20_04458 at 4661.076 kb on - strand, within MPMX20_04458 at 4661.107 kb on - strand, within MPMX20_04458 at 4661.196 kb on - strand, within MPMX20_04458 at 4661.198 kb on + strand, within MPMX20_04458 at 4661.198 kb on + strand, within MPMX20_04458 at 4661.206 kb on - strand, within MPMX20_04458 at 4661.235 kb on + strand, within MPMX20_04458 at 4661.240 kb on + strand, within MPMX20_04458 at 4661.243 kb on - strand, within MPMX20_04458 at 4661.288 kb on + strand, within MPMX20_04458 at 4661.288 kb on + strand, within MPMX20_04458 at 4661.315 kb on - strand, within MPMX20_04458 at 4661.315 kb on - strand, within MPMX20_04458 at 4661.320 kb on - strand, within MPMX20_04458 at 4661.333 kb on - strand, within MPMX20_04458 at 4661.382 kb on + strand, within MPMX20_04458 at 4661.390 kb on - strand, within MPMX20_04458 at 4661.390 kb on - strand, within MPMX20_04458 at 4661.460 kb on + strand, within MPMX20_04458 at 4661.486 kb on + strand, within MPMX20_04458 at 4661.525 kb on - strand, within MPMX20_04458 at 4661.573 kb on - strand, within MPMX20_04458 at 4661.573 kb on - strand, within MPMX20_04458 at 4661.607 kb on - strand, within MPMX20_04458 at 4661.680 kb on + strand, within MPMX20_04458 at 4661.782 kb on - strand, within MPMX20_04458 at 4661.782 kb on - strand, within MPMX20_04458 at 4661.782 kb on - strand, within MPMX20_04458 at 4661.784 kb on + strand, within MPMX20_04458
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,659,222 - MPMX20_04455 0.76 -4.0 4,659,235 + MPMX20_04455 0.77 -0.8 4,659,243 - MPMX20_04455 0.78 -0.1 4,659,243 - MPMX20_04455 0.78 -0.0 4,659,285 - MPMX20_04455 0.82 +0.1 4,659,285 - MPMX20_04455 0.82 -0.3 4,659,577 + -0.9 4,659,616 + -2.3 4,659,616 + +1.2 4,659,624 - +1.8 4,659,624 - +0.5 4,659,624 - +0.9 4,659,624 - -0.1 4,659,625 - -2.3 4,659,717 + MPMX20_04456 0.23 +1.6 4,659,753 - MPMX20_04456 0.29 +0.5 4,659,785 - MPMX20_04456 0.34 -1.2 4,659,785 - MPMX20_04456 0.34 -0.9 4,659,797 + MPMX20_04456 0.36 +1.5 4,659,832 + MPMX20_04456 0.42 +0.4 4,659,840 - MPMX20_04456 0.43 +0.1 4,659,845 - MPMX20_04456 0.44 +1.8 4,659,927 + MPMX20_04456 0.57 -1.5 4,659,935 - MPMX20_04456 0.58 +0.1 4,659,985 - MPMX20_04456 0.66 -0.2 4,660,002 - MPMX20_04456 0.69 +0.5 4,660,003 - MPMX20_04456 0.69 -2.1 4,660,003 - MPMX20_04456 0.69 -0.4 4,660,003 - MPMX20_04456 0.69 -1.1 4,660,092 - MPMX20_04456 0.84 -0.4 4,660,096 + MPMX20_04456 0.84 +0.5 4,660,104 - MPMX20_04456 0.86 +0.0 4,660,105 + MPMX20_04456 0.86 +0.8 4,660,123 - MPMX20_04456 0.89 -1.1 4,660,123 - MPMX20_04456 0.89 -1.4 4,660,130 - MPMX20_04456 0.90 -0.2 4,660,165 - +0.8 4,660,275 + MPMX20_04457 0.14 -0.1 4,660,295 + MPMX20_04457 0.17 -1.6 4,660,322 - MPMX20_04457 0.21 +0.2 4,660,323 - MPMX20_04457 0.21 -1.8 4,660,356 - MPMX20_04457 0.27 -1.0 4,660,356 - MPMX20_04457 0.27 -1.6 4,660,377 + MPMX20_04457 0.30 -0.6 4,660,385 - MPMX20_04457 0.31 -1.0 4,660,487 - MPMX20_04457 0.48 -1.1 4,660,543 - MPMX20_04457 0.57 -1.4 4,660,551 - MPMX20_04457 0.58 +0.5 4,660,581 - MPMX20_04457 0.63 -1.9 4,660,627 + MPMX20_04457 0.70 -0.4 4,660,765 + -0.6 4,660,765 + +0.8 4,660,768 - -1.5 4,660,772 + +0.0 4,660,773 - -2.4 4,660,780 - +0.3 4,660,890 + -2.4 4,660,898 - -0.4 4,660,898 - -1.2 4,660,922 - +0.8 4,660,949 + -0.6 4,661,076 - MPMX20_04458 0.11 -0.8 4,661,076 - MPMX20_04458 0.11 +0.9 4,661,076 - MPMX20_04458 0.11 +1.8 4,661,076 - MPMX20_04458 0.11 +1.8 4,661,107 - MPMX20_04458 0.12 -0.6 4,661,196 - MPMX20_04458 0.17 +1.5 4,661,198 + MPMX20_04458 0.17 -2.6 4,661,198 + MPMX20_04458 0.17 +0.2 4,661,206 - MPMX20_04458 0.18 +0.0 4,661,235 + MPMX20_04458 0.19 -1.6 4,661,240 + MPMX20_04458 0.19 -0.1 4,661,243 - MPMX20_04458 0.20 -1.0 4,661,288 + MPMX20_04458 0.22 -0.5 4,661,288 + MPMX20_04458 0.22 +0.7 4,661,315 - MPMX20_04458 0.23 -0.6 4,661,315 - MPMX20_04458 0.23 -3.3 4,661,320 - MPMX20_04458 0.24 +1.8 4,661,333 - MPMX20_04458 0.24 +0.2 4,661,382 + MPMX20_04458 0.27 -0.2 4,661,390 - MPMX20_04458 0.27 -1.1 4,661,390 - MPMX20_04458 0.27 -1.1 4,661,460 + MPMX20_04458 0.31 -0.2 4,661,486 + MPMX20_04458 0.32 -0.1 4,661,525 - MPMX20_04458 0.34 +0.2 4,661,573 - MPMX20_04458 0.37 -1.8 4,661,573 - MPMX20_04458 0.37 -0.9 4,661,607 - MPMX20_04458 0.39 +0.8 4,661,680 + MPMX20_04458 0.43 -1.5 4,661,782 - MPMX20_04458 0.48 -0.9 4,661,782 - MPMX20_04458 0.48 -1.1 4,661,782 - MPMX20_04458 0.48 -1.4 4,661,784 + MPMX20_04458 0.48 -1.5
Or see this region's nucleotide sequence