Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04324

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04323 and MPMX20_04324 are separated by 124 nucleotidesMPMX20_04324 and MPMX20_04325 overlap by 20 nucleotidesMPMX20_04325 and MPMX20_04326 overlap by 4 nucleotides MPMX20_04323: MPMX20_04323 - Glutathione hydrolase proenzyme, at 4,517,287 to 4,519,032 _04323 MPMX20_04324: MPMX20_04324 - putative protein YhhA, at 4,519,157 to 4,519,543 _04324 MPMX20_04325: MPMX20_04325 - Glycerophosphodiester phosphodiesterase, cytoplasmic, at 4,519,524 to 4,520,273 _04325 MPMX20_04326: MPMX20_04326 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 4,520,270 to 4,521,340 _04326 Position (kb) 4519 4520Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4518.215 kb on + strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.223 kb on - strand, within MPMX20_04323at 4518.225 kb on - strand, within MPMX20_04323at 4518.309 kb on + strand, within MPMX20_04323at 4518.309 kb on + strand, within MPMX20_04323at 4518.317 kb on - strand, within MPMX20_04323at 4518.333 kb on + strand, within MPMX20_04323at 4518.374 kb on + strand, within MPMX20_04323at 4518.382 kb on - strand, within MPMX20_04323at 4518.483 kb on + strand, within MPMX20_04323at 4518.519 kb on + strand, within MPMX20_04323at 4518.680 kb on - strand, within MPMX20_04323at 4518.780 kb on - strand, within MPMX20_04323at 4518.791 kb on - strand, within MPMX20_04323at 4518.816 kb on + strand, within MPMX20_04323at 4518.849 kb on + strand, within MPMX20_04323at 4518.878 kb on + strandat 4518.878 kb on + strandat 4518.878 kb on + strandat 4518.883 kb on + strandat 4518.886 kb on - strandat 4518.886 kb on - strandat 4518.974 kb on - strandat 4518.999 kb on + strandat 4518.999 kb on + strandat 4519.007 kb on - strandat 4519.007 kb on - strandat 4519.067 kb on + strandat 4519.068 kb on - strandat 4519.075 kb on - strandat 4519.078 kb on + strandat 4519.078 kb on + strandat 4519.078 kb on + strandat 4519.131 kb on - strandat 4519.131 kb on - strandat 4519.225 kb on + strand, within MPMX20_04324at 4519.230 kb on + strand, within MPMX20_04324at 4519.230 kb on + strand, within MPMX20_04324at 4519.233 kb on - strand, within MPMX20_04324at 4519.256 kb on - strand, within MPMX20_04324at 4519.339 kb on + strand, within MPMX20_04324at 4519.378 kb on + strand, within MPMX20_04324at 4519.397 kb on + strand, within MPMX20_04324at 4519.397 kb on + strand, within MPMX20_04324at 4519.403 kb on + strand, within MPMX20_04324at 4519.440 kb on + strand, within MPMX20_04324at 4519.503 kb on - strand, within MPMX20_04324at 4519.530 kb on - strandat 4519.591 kb on + strandat 4519.633 kb on + strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.641 kb on - strand, within MPMX20_04325at 4519.692 kb on - strand, within MPMX20_04325at 4519.696 kb on + strand, within MPMX20_04325at 4519.742 kb on - strand, within MPMX20_04325at 4519.747 kb on - strand, within MPMX20_04325at 4519.747 kb on - strand, within MPMX20_04325at 4519.852 kb on - strand, within MPMX20_04325at 4519.885 kb on - strand, within MPMX20_04325at 4519.951 kb on - strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.002 kb on + strand, within MPMX20_04325at 4520.089 kb on - strand, within MPMX20_04325at 4520.094 kb on + strand, within MPMX20_04325at 4520.230 kb on - strandat 4520.286 kb on - strandat 4520.346 kb on + strandat 4520.346 kb on + strandat 4520.346 kb on + strandat 4520.354 kb on - strandat 4520.354 kb on - strandat 4520.354 kb on - strandat 4520.394 kb on + strand, within MPMX20_04326at 4520.421 kb on + strand, within MPMX20_04326at 4520.431 kb on + strand, within MPMX20_04326at 4520.442 kb on + strand, within MPMX20_04326at 4520.471 kb on - strand, within MPMX20_04326at 4520.478 kb on - strand, within MPMX20_04326at 4520.479 kb on - strand, within MPMX20_04326

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,518,215 + MPMX20_04323 0.53 -0.3
4,518,223 - MPMX20_04323 0.54 +0.4
4,518,223 - MPMX20_04323 0.54 -0.1
4,518,223 - MPMX20_04323 0.54 +0.1
4,518,223 - MPMX20_04323 0.54 -2.2
4,518,223 - MPMX20_04323 0.54 -1.2
4,518,225 - MPMX20_04323 0.54 +1.0
4,518,309 + MPMX20_04323 0.59 +0.5
4,518,309 + MPMX20_04323 0.59 -1.0
4,518,317 - MPMX20_04323 0.59 +2.8
4,518,333 + MPMX20_04323 0.60 +1.5
4,518,374 + MPMX20_04323 0.62 +2.8
4,518,382 - MPMX20_04323 0.63 +0.2
4,518,483 + MPMX20_04323 0.68 +0.5
4,518,519 + MPMX20_04323 0.71 -0.2
4,518,680 - MPMX20_04323 0.80 +1.2
4,518,780 - MPMX20_04323 0.86 +1.2
4,518,791 - MPMX20_04323 0.86 +0.0
4,518,816 + MPMX20_04323 0.88 +1.6
4,518,849 + MPMX20_04323 0.89 -0.5
4,518,878 + +1.2
4,518,878 + +0.1
4,518,878 + -0.7
4,518,883 + -0.6
4,518,886 - -1.9
4,518,886 - +2.6
4,518,974 - -1.1
4,518,999 + -0.2
4,518,999 + -0.4
4,519,007 - +0.8
4,519,007 - -2.3
4,519,067 + +1.2
4,519,068 - +0.0
4,519,075 - -1.3
4,519,078 + +0.3
4,519,078 + -0.6
4,519,078 + -0.6
4,519,131 - -2.5
4,519,131 - -0.5
4,519,225 + MPMX20_04324 0.18 -0.9
4,519,230 + MPMX20_04324 0.19 -1.6
4,519,230 + MPMX20_04324 0.19 -0.6
4,519,233 - MPMX20_04324 0.20 +0.8
4,519,256 - MPMX20_04324 0.26 +0.0
4,519,339 + MPMX20_04324 0.47 -2.1
4,519,378 + MPMX20_04324 0.57 +1.2
4,519,397 + MPMX20_04324 0.62 -2.9
4,519,397 + MPMX20_04324 0.62 -0.8
4,519,403 + MPMX20_04324 0.64 -1.0
4,519,440 + MPMX20_04324 0.73 +0.2
4,519,503 - MPMX20_04324 0.89 +0.5
4,519,530 - -0.1
4,519,591 + -0.9
4,519,633 + MPMX20_04325 0.15 +1.2
4,519,641 - MPMX20_04325 0.16 +0.1
4,519,641 - MPMX20_04325 0.16 -1.8
4,519,641 - MPMX20_04325 0.16 +0.0
4,519,692 - MPMX20_04325 0.22 -0.8
4,519,696 + MPMX20_04325 0.23 -0.1
4,519,742 - MPMX20_04325 0.29 -0.8
4,519,747 - MPMX20_04325 0.30 -0.1
4,519,747 - MPMX20_04325 0.30 +0.5
4,519,852 - MPMX20_04325 0.44 +0.5
4,519,885 - MPMX20_04325 0.48 +0.2
4,519,951 - MPMX20_04325 0.57 +0.7
4,520,002 + MPMX20_04325 0.64 -1.4
4,520,002 + MPMX20_04325 0.64 -2.2
4,520,002 + MPMX20_04325 0.64 -2.0
4,520,089 - MPMX20_04325 0.75 -2.3
4,520,094 + MPMX20_04325 0.76 -0.2
4,520,230 - +0.2
4,520,286 - -0.5
4,520,346 + -1.5
4,520,346 + +1.1
4,520,346 + +1.5
4,520,354 - +0.5
4,520,354 - +1.9
4,520,354 - -1.1
4,520,394 + MPMX20_04326 0.12 +0.7
4,520,421 + MPMX20_04326 0.14 -0.3
4,520,431 + MPMX20_04326 0.15 -1.1
4,520,442 + MPMX20_04326 0.16 +1.0
4,520,471 - MPMX20_04326 0.19 +0.4
4,520,478 - MPMX20_04326 0.19 +2.8
4,520,479 - MPMX20_04326 0.20 -0.5

Or see this region's nucleotide sequence