Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04051 and MPMX20_04052 overlap by 43 nucleotides MPMX20_04052 and MPMX20_04053 are separated by 21 nucleotides MPMX20_04053 and MPMX20_04054 are separated by 9 nucleotides MPMX20_04054 and MPMX20_04055 are separated by 51 nucleotides
MPMX20_04051: MPMX20_04051 - Penicillin-binding protein activator LpoA, at 4,249,988 to 4,252,234
_04051
MPMX20_04052: MPMX20_04052 - hypothetical protein, at 4,252,192 to 4,252,587
_04052
MPMX20_04053: MPMX20_04053 - DnaA initiator-associating protein DiaA, at 4,252,609 to 4,253,199
_04053
MPMX20_04054: MPMX20_04054 - Osmotically-inducible protein Y, at 4,253,209 to 4,253,784
_04054
MPMX20_04055: MPMX20_04055 - hypothetical protein, at 4,253,836 to 4,254,873
_04055
Position (kb)
4252
4253
4254 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4251.645 kb on + strand, within MPMX20_04051 at 4251.645 kb on + strand, within MPMX20_04051 at 4251.645 kb on + strand, within MPMX20_04051 at 4251.653 kb on - strand, within MPMX20_04051 at 4251.653 kb on - strand, within MPMX20_04051 at 4251.653 kb on - strand, within MPMX20_04051 at 4251.653 kb on - strand, within MPMX20_04051 at 4251.694 kb on - strand, within MPMX20_04051 at 4251.716 kb on - strand, within MPMX20_04051 at 4251.716 kb on - strand, within MPMX20_04051 at 4251.740 kb on - strand, within MPMX20_04051 at 4251.751 kb on + strand, within MPMX20_04051 at 4251.751 kb on + strand, within MPMX20_04051 at 4251.799 kb on + strand, within MPMX20_04051 at 4251.817 kb on - strand, within MPMX20_04051 at 4251.817 kb on - strand, within MPMX20_04051 at 4251.865 kb on + strand, within MPMX20_04051 at 4251.870 kb on + strand, within MPMX20_04051 at 4251.873 kb on - strand, within MPMX20_04051 at 4251.873 kb on - strand, within MPMX20_04051 at 4251.875 kb on + strand, within MPMX20_04051 at 4251.893 kb on + strand, within MPMX20_04051 at 4251.901 kb on - strand, within MPMX20_04051 at 4251.901 kb on - strand, within MPMX20_04051 at 4251.902 kb on + strand, within MPMX20_04051 at 4251.914 kb on + strand, within MPMX20_04051 at 4251.924 kb on + strand, within MPMX20_04051 at 4252.004 kb on - strand, within MPMX20_04051 at 4252.122 kb on + strand at 4252.123 kb on - strand at 4252.130 kb on - strand at 4252.160 kb on + strand at 4252.165 kb on + strand at 4252.294 kb on + strand, within MPMX20_04052 at 4252.302 kb on - strand, within MPMX20_04052 at 4252.366 kb on + strand, within MPMX20_04052 at 4252.420 kb on + strand, within MPMX20_04052 at 4252.425 kb on - strand, within MPMX20_04052 at 4252.470 kb on + strand, within MPMX20_04052 at 4252.478 kb on - strand, within MPMX20_04052 at 4252.478 kb on - strand, within MPMX20_04052 at 4252.478 kb on - strand, within MPMX20_04052 at 4252.505 kb on - strand, within MPMX20_04052 at 4252.525 kb on + strand, within MPMX20_04052 at 4252.609 kb on - strand at 4252.644 kb on + strand at 4252.664 kb on - strand at 4252.664 kb on - strand at 4252.666 kb on + strand at 4252.728 kb on - strand, within MPMX20_04053 at 4252.855 kb on + strand, within MPMX20_04053 at 4252.860 kb on + strand, within MPMX20_04053 at 4252.868 kb on - strand, within MPMX20_04053 at 4252.921 kb on + strand, within MPMX20_04053 at 4252.929 kb on - strand, within MPMX20_04053 at 4252.929 kb on - strand, within MPMX20_04053 at 4252.955 kb on + strand, within MPMX20_04053 at 4252.971 kb on - strand, within MPMX20_04053 at 4252.981 kb on - strand, within MPMX20_04053 at 4253.046 kb on - strand, within MPMX20_04053 at 4253.118 kb on + strand, within MPMX20_04053 at 4253.118 kb on + strand, within MPMX20_04053 at 4253.126 kb on - strand, within MPMX20_04053 at 4253.216 kb on - strand at 4253.233 kb on + strand at 4253.233 kb on + strand at 4253.241 kb on - strand at 4253.354 kb on + strand, within MPMX20_04054 at 4253.373 kb on - strand, within MPMX20_04054 at 4253.375 kb on - strand, within MPMX20_04054 at 4253.385 kb on - strand, within MPMX20_04054 at 4253.476 kb on + strand, within MPMX20_04054 at 4253.484 kb on - strand, within MPMX20_04054 at 4253.494 kb on - strand, within MPMX20_04054 at 4253.555 kb on + strand, within MPMX20_04054 at 4253.573 kb on - strand, within MPMX20_04054 at 4253.617 kb on - strand, within MPMX20_04054 at 4253.639 kb on - strand, within MPMX20_04054 at 4253.686 kb on + strand, within MPMX20_04054 at 4253.752 kb on - strand at 4253.764 kb on + strand at 4253.772 kb on - strand at 4253.822 kb on + strand at 4253.842 kb on - strand at 4253.844 kb on + strand at 4253.852 kb on - strand at 4253.852 kb on - strand at 4253.926 kb on - strand at 4253.936 kb on + strand at 4253.963 kb on + strand, within MPMX20_04055 at 4254.013 kb on + strand, within MPMX20_04055 at 4254.016 kb on - strand, within MPMX20_04055 at 4254.021 kb on - strand, within MPMX20_04055 at 4254.083 kb on + strand, within MPMX20_04055 at 4254.083 kb on + strand, within MPMX20_04055 at 4254.091 kb on - strand, within MPMX20_04055 at 4254.159 kb on - strand, within MPMX20_04055 at 4254.159 kb on - strand, within MPMX20_04055
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,251,645 + MPMX20_04051 0.74 +1.0 4,251,645 + MPMX20_04051 0.74 -1.6 4,251,645 + MPMX20_04051 0.74 +0.9 4,251,653 - MPMX20_04051 0.74 +0.7 4,251,653 - MPMX20_04051 0.74 +0.4 4,251,653 - MPMX20_04051 0.74 -0.1 4,251,653 - MPMX20_04051 0.74 -1.5 4,251,694 - MPMX20_04051 0.76 +0.1 4,251,716 - MPMX20_04051 0.77 -0.6 4,251,716 - MPMX20_04051 0.77 -2.1 4,251,740 - MPMX20_04051 0.78 -0.1 4,251,751 + MPMX20_04051 0.78 -0.1 4,251,751 + MPMX20_04051 0.78 -1.3 4,251,799 + MPMX20_04051 0.81 +0.8 4,251,817 - MPMX20_04051 0.81 +0.2 4,251,817 - MPMX20_04051 0.81 +0.7 4,251,865 + MPMX20_04051 0.84 -0.0 4,251,870 + MPMX20_04051 0.84 -0.8 4,251,873 - MPMX20_04051 0.84 -0.5 4,251,873 - MPMX20_04051 0.84 -1.3 4,251,875 + MPMX20_04051 0.84 -1.0 4,251,893 + MPMX20_04051 0.85 -0.6 4,251,901 - MPMX20_04051 0.85 -1.0 4,251,901 - MPMX20_04051 0.85 -1.5 4,251,902 + MPMX20_04051 0.85 -2.1 4,251,914 + MPMX20_04051 0.86 -0.8 4,251,924 + MPMX20_04051 0.86 +0.7 4,252,004 - MPMX20_04051 0.90 -0.7 4,252,122 + -0.8 4,252,123 - -1.1 4,252,130 - -2.0 4,252,160 + +0.7 4,252,165 + -0.7 4,252,294 + MPMX20_04052 0.26 -1.6 4,252,302 - MPMX20_04052 0.28 -0.5 4,252,366 + MPMX20_04052 0.44 -0.6 4,252,420 + MPMX20_04052 0.58 -1.5 4,252,425 - MPMX20_04052 0.59 +0.4 4,252,470 + MPMX20_04052 0.70 +0.2 4,252,478 - MPMX20_04052 0.72 -0.5 4,252,478 - MPMX20_04052 0.72 +1.7 4,252,478 - MPMX20_04052 0.72 +0.6 4,252,505 - MPMX20_04052 0.79 +1.6 4,252,525 + MPMX20_04052 0.84 -0.8 4,252,609 - +0.7 4,252,644 + +0.4 4,252,664 - -0.8 4,252,664 - +0.2 4,252,666 + -0.7 4,252,728 - MPMX20_04053 0.20 -0.8 4,252,855 + MPMX20_04053 0.42 -0.5 4,252,860 + MPMX20_04053 0.42 -0.3 4,252,868 - MPMX20_04053 0.44 -3.4 4,252,921 + MPMX20_04053 0.53 -0.6 4,252,929 - MPMX20_04053 0.54 -2.0 4,252,929 - MPMX20_04053 0.54 +1.2 4,252,955 + MPMX20_04053 0.59 -0.3 4,252,971 - MPMX20_04053 0.61 +0.9 4,252,981 - MPMX20_04053 0.63 +0.7 4,253,046 - MPMX20_04053 0.74 -0.8 4,253,118 + MPMX20_04053 0.86 -1.8 4,253,118 + MPMX20_04053 0.86 -0.1 4,253,126 - MPMX20_04053 0.87 -1.3 4,253,216 - +0.6 4,253,233 + +0.6 4,253,233 + -0.3 4,253,241 - +0.8 4,253,354 + MPMX20_04054 0.25 +0.7 4,253,373 - MPMX20_04054 0.28 +2.7 4,253,375 - MPMX20_04054 0.29 +0.7 4,253,385 - MPMX20_04054 0.31 -1.5 4,253,476 + MPMX20_04054 0.46 -0.7 4,253,484 - MPMX20_04054 0.48 -0.3 4,253,494 - MPMX20_04054 0.49 -1.3 4,253,555 + MPMX20_04054 0.60 -1.5 4,253,573 - MPMX20_04054 0.63 -2.6 4,253,617 - MPMX20_04054 0.71 +1.2 4,253,639 - MPMX20_04054 0.75 -0.7 4,253,686 + MPMX20_04054 0.83 -0.3 4,253,752 - -0.1 4,253,764 + -0.6 4,253,772 - -1.1 4,253,822 + +0.3 4,253,842 - +0.0 4,253,844 + -2.5 4,253,852 - -0.1 4,253,852 - -1.0 4,253,926 - +1.7 4,253,936 + +1.7 4,253,963 + MPMX20_04055 0.12 +0.7 4,254,013 + MPMX20_04055 0.17 +0.7 4,254,016 - MPMX20_04055 0.17 -1.5 4,254,021 - MPMX20_04055 0.18 -1.6 4,254,083 + MPMX20_04055 0.24 +1.7 4,254,083 + MPMX20_04055 0.24 -0.4 4,254,091 - MPMX20_04055 0.25 -0.7 4,254,159 - MPMX20_04055 0.31 +1.0 4,254,159 - MPMX20_04055 0.31 -0.8
Or see this region's nucleotide sequence