Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03474 and MPMX20_03475 are separated by 37 nucleotides MPMX20_03475 and MPMX20_03476 are separated by 131 nucleotides MPMX20_03476 and MPMX20_03477 are separated by 43 nucleotides
MPMX20_03474: MPMX20_03474 - hypothetical protein, at 3,664,822 to 3,666,192
_03474
MPMX20_03475: MPMX20_03475 - hypothetical protein, at 3,666,230 to 3,666,634
_03475
MPMX20_03476: MPMX20_03476 - 50S ribosomal protein L19, at 3,666,766 to 3,667,113
_03476
MPMX20_03477: MPMX20_03477 - tRNA (guanine-N(1)-)-methyltransferase, at 3,667,157 to 3,667,924
_03477
Position (kb)
3666
3667 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3665.282 kb on + strand, within MPMX20_03474 at 3665.282 kb on + strand, within MPMX20_03474 at 3665.282 kb on + strand, within MPMX20_03474 at 3665.282 kb on + strand, within MPMX20_03474 at 3665.282 kb on + strand, within MPMX20_03474 at 3665.290 kb on - strand, within MPMX20_03474 at 3665.290 kb on - strand, within MPMX20_03474 at 3665.290 kb on - strand, within MPMX20_03474 at 3665.290 kb on - strand, within MPMX20_03474 at 3665.290 kb on - strand, within MPMX20_03474 at 3665.290 kb on - strand, within MPMX20_03474 at 3665.290 kb on - strand, within MPMX20_03474 at 3665.474 kb on + strand, within MPMX20_03474 at 3665.474 kb on + strand, within MPMX20_03474 at 3665.474 kb on + strand, within MPMX20_03474 at 3665.474 kb on + strand, within MPMX20_03474 at 3665.482 kb on - strand, within MPMX20_03474 at 3665.482 kb on - strand, within MPMX20_03474 at 3665.482 kb on - strand, within MPMX20_03474 at 3665.482 kb on - strand, within MPMX20_03474 at 3665.487 kb on + strand, within MPMX20_03474 at 3665.487 kb on - strand, within MPMX20_03474 at 3665.495 kb on - strand, within MPMX20_03474 at 3665.522 kb on - strand, within MPMX20_03474 at 3665.524 kb on - strand, within MPMX20_03474 at 3665.556 kb on - strand, within MPMX20_03474 at 3665.577 kb on - strand, within MPMX20_03474 at 3665.590 kb on + strand, within MPMX20_03474 at 3665.591 kb on + strand, within MPMX20_03474 at 3665.591 kb on + strand, within MPMX20_03474 at 3665.822 kb on - strand, within MPMX20_03474 at 3665.822 kb on - strand, within MPMX20_03474 at 3665.822 kb on - strand, within MPMX20_03474 at 3665.825 kb on + strand, within MPMX20_03474 at 3665.832 kb on + strand, within MPMX20_03474 at 3665.840 kb on - strand, within MPMX20_03474 at 3665.840 kb on - strand, within MPMX20_03474 at 3665.840 kb on - strand, within MPMX20_03474 at 3665.840 kb on - strand, within MPMX20_03474 at 3665.907 kb on - strand, within MPMX20_03474 at 3665.918 kb on + strand, within MPMX20_03474 at 3665.955 kb on + strand, within MPMX20_03474 at 3665.965 kb on - strand, within MPMX20_03474 at 3666.004 kb on - strand, within MPMX20_03474 at 3666.071 kb on + strand at 3666.156 kb on + strand at 3666.179 kb on + strand at 3666.266 kb on + strand at 3666.330 kb on - strand, within MPMX20_03475 at 3666.343 kb on + strand, within MPMX20_03475 at 3666.343 kb on + strand, within MPMX20_03475 at 3666.343 kb on + strand, within MPMX20_03475 at 3666.343 kb on - strand, within MPMX20_03475 at 3666.343 kb on - strand, within MPMX20_03475 at 3666.351 kb on - strand, within MPMX20_03475 at 3666.400 kb on + strand, within MPMX20_03475 at 3666.408 kb on - strand, within MPMX20_03475 at 3666.436 kb on - strand, within MPMX20_03475 at 3666.476 kb on + strand, within MPMX20_03475 at 3666.540 kb on + strand, within MPMX20_03475 at 3666.563 kb on - strand, within MPMX20_03475 at 3666.691 kb on - strand at 3666.838 kb on - strand, within MPMX20_03476 at 3667.174 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,665,282 + MPMX20_03474 0.34 -1.7 3,665,282 + MPMX20_03474 0.34 -0.4 3,665,282 + MPMX20_03474 0.34 -0.7 3,665,282 + MPMX20_03474 0.34 -1.3 3,665,282 + MPMX20_03474 0.34 -1.3 3,665,290 - MPMX20_03474 0.34 +0.3 3,665,290 - MPMX20_03474 0.34 +0.5 3,665,290 - MPMX20_03474 0.34 -0.2 3,665,290 - MPMX20_03474 0.34 -0.2 3,665,290 - MPMX20_03474 0.34 -1.2 3,665,290 - MPMX20_03474 0.34 -0.2 3,665,290 - MPMX20_03474 0.34 -3.4 3,665,474 + MPMX20_03474 0.48 -0.5 3,665,474 + MPMX20_03474 0.48 -0.8 3,665,474 + MPMX20_03474 0.48 +0.5 3,665,474 + MPMX20_03474 0.48 +0.6 3,665,482 - MPMX20_03474 0.48 +1.2 3,665,482 - MPMX20_03474 0.48 -1.0 3,665,482 - MPMX20_03474 0.48 -0.0 3,665,482 - MPMX20_03474 0.48 -0.2 3,665,487 + MPMX20_03474 0.49 -1.3 3,665,487 - MPMX20_03474 0.49 -0.5 3,665,495 - MPMX20_03474 0.49 +0.9 3,665,522 - MPMX20_03474 0.51 +1.0 3,665,524 - MPMX20_03474 0.51 +2.5 3,665,556 - MPMX20_03474 0.54 -1.9 3,665,577 - MPMX20_03474 0.55 -0.3 3,665,590 + MPMX20_03474 0.56 -0.2 3,665,591 + MPMX20_03474 0.56 -1.4 3,665,591 + MPMX20_03474 0.56 -0.1 3,665,822 - MPMX20_03474 0.73 -0.2 3,665,822 - MPMX20_03474 0.73 +0.4 3,665,822 - MPMX20_03474 0.73 +0.8 3,665,825 + MPMX20_03474 0.73 +0.8 3,665,832 + MPMX20_03474 0.74 -1.7 3,665,840 - MPMX20_03474 0.74 +0.8 3,665,840 - MPMX20_03474 0.74 -2.2 3,665,840 - MPMX20_03474 0.74 -1.7 3,665,840 - MPMX20_03474 0.74 -0.2 3,665,907 - MPMX20_03474 0.79 +0.8 3,665,918 + MPMX20_03474 0.80 +0.5 3,665,955 + MPMX20_03474 0.83 -1.7 3,665,965 - MPMX20_03474 0.83 +0.5 3,666,004 - MPMX20_03474 0.86 +0.2 3,666,071 + +1.8 3,666,156 + -1.6 3,666,179 + +0.2 3,666,266 + +2.2 3,666,330 - MPMX20_03475 0.25 +1.8 3,666,343 + MPMX20_03475 0.28 -0.6 3,666,343 + MPMX20_03475 0.28 +1.2 3,666,343 + MPMX20_03475 0.28 -2.3 3,666,343 - MPMX20_03475 0.28 -2.5 3,666,343 - MPMX20_03475 0.28 +0.8 3,666,351 - MPMX20_03475 0.30 -0.8 3,666,400 + MPMX20_03475 0.42 -1.0 3,666,408 - MPMX20_03475 0.44 -0.7 3,666,436 - MPMX20_03475 0.51 +0.6 3,666,476 + MPMX20_03475 0.61 -0.9 3,666,540 + MPMX20_03475 0.77 +0.5 3,666,563 - MPMX20_03475 0.82 -1.0 3,666,691 - +0.8 3,666,838 - MPMX20_03476 0.21 -0.8 3,667,174 - -0.3
Or see this region's nucleotide sequence