Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03271 and MPMX20_03272 are separated by 44 nucleotides MPMX20_03272 and MPMX20_03273 are separated by 315 nucleotides
MPMX20_03271: MPMX20_03271 - Long-chain fatty acid transport protein, at 3,442,159 to 3,443,487
_03271
MPMX20_03272: MPMX20_03272 - Intermembrane phospholipid transport system lipoprotein MlaA, at 3,443,532 to 3,444,284
_03272
MPMX20_03273: MPMX20_03273 - Inner membrane protein YfdC, at 3,444,600 to 3,445,529
_03273
Position (kb)
3443
3444
3445 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3442.544 kb on - strand, within MPMX20_03271 at 3442.615 kb on - strand, within MPMX20_03271 at 3442.622 kb on - strand, within MPMX20_03271 at 3442.631 kb on - strand, within MPMX20_03271 at 3442.743 kb on - strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.812 kb on + strand, within MPMX20_03271 at 3442.820 kb on - strand, within MPMX20_03271 at 3442.820 kb on - strand, within MPMX20_03271 at 3442.820 kb on - strand, within MPMX20_03271 at 3442.847 kb on + strand, within MPMX20_03271 at 3442.855 kb on - strand, within MPMX20_03271 at 3442.855 kb on - strand, within MPMX20_03271 at 3442.855 kb on - strand, within MPMX20_03271 at 3442.944 kb on + strand, within MPMX20_03271 at 3442.952 kb on - strand, within MPMX20_03271 at 3442.952 kb on - strand, within MPMX20_03271 at 3442.966 kb on - strand, within MPMX20_03271 at 3442.981 kb on - strand, within MPMX20_03271 at 3443.026 kb on - strand, within MPMX20_03271 at 3443.086 kb on + strand, within MPMX20_03271 at 3443.086 kb on + strand, within MPMX20_03271 at 3443.094 kb on - strand, within MPMX20_03271 at 3443.094 kb on - strand, within MPMX20_03271 at 3443.095 kb on + strand, within MPMX20_03271 at 3443.095 kb on + strand, within MPMX20_03271 at 3443.100 kb on + strand, within MPMX20_03271 at 3443.103 kb on - strand, within MPMX20_03271 at 3443.103 kb on - strand, within MPMX20_03271 at 3443.103 kb on - strand, within MPMX20_03271 at 3443.103 kb on - strand, within MPMX20_03271 at 3443.130 kb on + strand, within MPMX20_03271 at 3443.208 kb on + strand, within MPMX20_03271 at 3443.216 kb on - strand, within MPMX20_03271 at 3443.216 kb on - strand, within MPMX20_03271 at 3443.216 kb on - strand, within MPMX20_03271 at 3443.224 kb on + strand, within MPMX20_03271 at 3443.232 kb on + strand, within MPMX20_03271 at 3443.259 kb on - strand, within MPMX20_03271 at 3443.321 kb on - strand, within MPMX20_03271 at 3443.335 kb on + strand, within MPMX20_03271 at 3443.338 kb on - strand, within MPMX20_03271 at 3443.341 kb on + strand, within MPMX20_03271 at 3443.416 kb on - strand at 3443.438 kb on - strand at 3443.438 kb on - strand at 3443.443 kb on + strand at 3443.443 kb on + strand at 3443.443 kb on + strand at 3443.443 kb on + strand at 3443.443 kb on + strand at 3443.444 kb on + strand at 3443.451 kb on - strand at 3443.462 kb on + strand at 3443.497 kb on + strand at 3443.505 kb on - strand at 3443.671 kb on - strand, within MPMX20_03272 at 3443.671 kb on - strand, within MPMX20_03272 at 3443.721 kb on + strand, within MPMX20_03272 at 3443.727 kb on - strand, within MPMX20_03272 at 3443.729 kb on - strand, within MPMX20_03272 at 3443.771 kb on + strand, within MPMX20_03272 at 3444.015 kb on + strand, within MPMX20_03272 at 3444.020 kb on + strand, within MPMX20_03272 at 3444.020 kb on + strand, within MPMX20_03272 at 3444.028 kb on - strand, within MPMX20_03272 at 3444.050 kb on + strand, within MPMX20_03272 at 3444.165 kb on + strand, within MPMX20_03272 at 3444.166 kb on - strand, within MPMX20_03272 at 3444.173 kb on - strand, within MPMX20_03272 at 3444.173 kb on - strand, within MPMX20_03272 at 3444.188 kb on - strand, within MPMX20_03272 at 3444.196 kb on + strand, within MPMX20_03272 at 3444.204 kb on - strand, within MPMX20_03272 at 3444.226 kb on - strand at 3444.226 kb on - strand at 3444.234 kb on + strand at 3444.305 kb on - strand at 3444.333 kb on + strand at 3444.333 kb on - strand at 3444.341 kb on - strand at 3444.404 kb on + strand at 3444.404 kb on + strand at 3444.426 kb on + strand at 3444.431 kb on + strand at 3444.433 kb on + strand at 3444.434 kb on - strand at 3444.436 kb on + strand at 3444.446 kb on - strand at 3444.560 kb on + strand at 3444.587 kb on - strand at 3444.594 kb on - strand at 3444.715 kb on - strand, within MPMX20_03273 at 3444.780 kb on + strand, within MPMX20_03273 at 3444.804 kb on + strand, within MPMX20_03273 at 3444.828 kb on - strand, within MPMX20_03273 at 3444.828 kb on - strand, within MPMX20_03273 at 3444.839 kb on + strand, within MPMX20_03273 at 3444.847 kb on - strand, within MPMX20_03273 at 3444.847 kb on - strand, within MPMX20_03273 at 3444.848 kb on - strand, within MPMX20_03273 at 3444.864 kb on + strand, within MPMX20_03273 at 3444.865 kb on - strand, within MPMX20_03273 at 3444.904 kb on + strand, within MPMX20_03273 at 3444.981 kb on + strand, within MPMX20_03273 at 3444.988 kb on + strand, within MPMX20_03273 at 3444.996 kb on - strand, within MPMX20_03273 at 3444.996 kb on - strand, within MPMX20_03273 at 3444.996 kb on - strand, within MPMX20_03273 at 3445.020 kb on + strand, within MPMX20_03273 at 3445.028 kb on - strand, within MPMX20_03273 at 3445.030 kb on + strand, within MPMX20_03273 at 3445.030 kb on + strand, within MPMX20_03273 at 3445.030 kb on + strand, within MPMX20_03273 at 3445.033 kb on + strand, within MPMX20_03273 at 3445.061 kb on + strand, within MPMX20_03273 at 3445.065 kb on - strand, within MPMX20_03273 at 3445.203 kb on - strand, within MPMX20_03273 at 3445.245 kb on - strand, within MPMX20_03273 at 3445.278 kb on - strand, within MPMX20_03273 at 3445.283 kb on + strand, within MPMX20_03273 at 3445.283 kb on + strand, within MPMX20_03273
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,442,544 - MPMX20_03271 0.29 -0.4 3,442,615 - MPMX20_03271 0.34 -0.5 3,442,622 - MPMX20_03271 0.35 -0.2 3,442,631 - MPMX20_03271 0.36 -2.6 3,442,743 - MPMX20_03271 0.44 +0.8 3,442,812 + MPMX20_03271 0.49 +0.1 3,442,812 + MPMX20_03271 0.49 -0.2 3,442,812 + MPMX20_03271 0.49 +1.7 3,442,812 + MPMX20_03271 0.49 +0.2 3,442,812 + MPMX20_03271 0.49 -1.5 3,442,812 + MPMX20_03271 0.49 +0.2 3,442,812 + MPMX20_03271 0.49 -2.0 3,442,812 + MPMX20_03271 0.49 -2.1 3,442,812 + MPMX20_03271 0.49 -0.9 3,442,820 - MPMX20_03271 0.50 -2.0 3,442,820 - MPMX20_03271 0.50 -0.1 3,442,820 - MPMX20_03271 0.50 +0.7 3,442,847 + MPMX20_03271 0.52 -0.5 3,442,855 - MPMX20_03271 0.52 -0.2 3,442,855 - MPMX20_03271 0.52 -1.0 3,442,855 - MPMX20_03271 0.52 -0.9 3,442,944 + MPMX20_03271 0.59 +1.9 3,442,952 - MPMX20_03271 0.60 -0.4 3,442,952 - MPMX20_03271 0.60 -1.9 3,442,966 - MPMX20_03271 0.61 -0.7 3,442,981 - MPMX20_03271 0.62 +1.6 3,443,026 - MPMX20_03271 0.65 -0.7 3,443,086 + MPMX20_03271 0.70 -1.4 3,443,086 + MPMX20_03271 0.70 -0.4 3,443,094 - MPMX20_03271 0.70 -1.1 3,443,094 - MPMX20_03271 0.70 -0.2 3,443,095 + MPMX20_03271 0.70 -0.1 3,443,095 + MPMX20_03271 0.70 -1.5 3,443,100 + MPMX20_03271 0.71 -0.4 3,443,103 - MPMX20_03271 0.71 +0.1 3,443,103 - MPMX20_03271 0.71 +0.0 3,443,103 - MPMX20_03271 0.71 -1.5 3,443,103 - MPMX20_03271 0.71 +1.3 3,443,130 + MPMX20_03271 0.73 +0.9 3,443,208 + MPMX20_03271 0.79 +0.6 3,443,216 - MPMX20_03271 0.80 -1.4 3,443,216 - MPMX20_03271 0.80 -0.2 3,443,216 - MPMX20_03271 0.80 -0.5 3,443,224 + MPMX20_03271 0.80 -0.2 3,443,232 + MPMX20_03271 0.81 -0.7 3,443,259 - MPMX20_03271 0.83 -0.2 3,443,321 - MPMX20_03271 0.87 -1.3 3,443,335 + MPMX20_03271 0.88 -0.1 3,443,338 - MPMX20_03271 0.89 +1.9 3,443,341 + MPMX20_03271 0.89 -1.3 3,443,416 - +2.5 3,443,438 - -2.1 3,443,438 - +1.0 3,443,443 + -0.1 3,443,443 + +0.1 3,443,443 + +0.6 3,443,443 + +1.6 3,443,443 + +0.0 3,443,444 + -0.4 3,443,451 - -0.4 3,443,462 + -1.4 3,443,497 + -0.8 3,443,505 - +0.3 3,443,671 - MPMX20_03272 0.18 +0.3 3,443,671 - MPMX20_03272 0.18 -0.7 3,443,721 + MPMX20_03272 0.25 -1.7 3,443,727 - MPMX20_03272 0.26 -0.2 3,443,729 - MPMX20_03272 0.26 -1.1 3,443,771 + MPMX20_03272 0.32 -0.4 3,444,015 + MPMX20_03272 0.64 +0.9 3,444,020 + MPMX20_03272 0.65 -1.2 3,444,020 + MPMX20_03272 0.65 -0.3 3,444,028 - MPMX20_03272 0.66 +2.3 3,444,050 + MPMX20_03272 0.69 -1.1 3,444,165 + MPMX20_03272 0.84 -1.9 3,444,166 - MPMX20_03272 0.84 -2.1 3,444,173 - MPMX20_03272 0.85 +0.2 3,444,173 - MPMX20_03272 0.85 -1.4 3,444,188 - MPMX20_03272 0.87 -0.7 3,444,196 + MPMX20_03272 0.88 -0.8 3,444,204 - MPMX20_03272 0.89 -2.4 3,444,226 - -0.5 3,444,226 - -1.5 3,444,234 + -0.7 3,444,305 - +1.8 3,444,333 + +0.9 3,444,333 - +1.3 3,444,341 - +1.3 3,444,404 + +0.1 3,444,404 + -1.1 3,444,426 + -1.4 3,444,431 + -0.4 3,444,433 + -1.0 3,444,434 - -1.9 3,444,436 + +1.3 3,444,446 - +1.9 3,444,560 + -0.6 3,444,587 - +2.9 3,444,594 - +0.9 3,444,715 - MPMX20_03273 0.12 +2.9 3,444,780 + MPMX20_03273 0.19 -0.9 3,444,804 + MPMX20_03273 0.22 -1.5 3,444,828 - MPMX20_03273 0.25 +1.6 3,444,828 - MPMX20_03273 0.25 +0.6 3,444,839 + MPMX20_03273 0.26 +1.9 3,444,847 - MPMX20_03273 0.27 -1.9 3,444,847 - MPMX20_03273 0.27 -0.1 3,444,848 - MPMX20_03273 0.27 -0.4 3,444,864 + MPMX20_03273 0.28 +0.3 3,444,865 - MPMX20_03273 0.28 -1.8 3,444,904 + MPMX20_03273 0.33 -1.0 3,444,981 + MPMX20_03273 0.41 -1.0 3,444,988 + MPMX20_03273 0.42 -0.5 3,444,996 - MPMX20_03273 0.43 -0.8 3,444,996 - MPMX20_03273 0.43 +0.3 3,444,996 - MPMX20_03273 0.43 -1.2 3,445,020 + MPMX20_03273 0.45 -0.5 3,445,028 - MPMX20_03273 0.46 +1.3 3,445,030 + MPMX20_03273 0.46 -1.0 3,445,030 + MPMX20_03273 0.46 -1.1 3,445,030 + MPMX20_03273 0.46 -0.1 3,445,033 + MPMX20_03273 0.47 -0.6 3,445,061 + MPMX20_03273 0.50 +1.6 3,445,065 - MPMX20_03273 0.50 -0.4 3,445,203 - MPMX20_03273 0.65 -0.1 3,445,245 - MPMX20_03273 0.69 +0.6 3,445,278 - MPMX20_03273 0.73 -0.4 3,445,283 + MPMX20_03273 0.73 +1.9 3,445,283 + MPMX20_03273 0.73 +0.3
Or see this region's nucleotide sequence