Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03272

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03271 and MPMX20_03272 are separated by 44 nucleotidesMPMX20_03272 and MPMX20_03273 are separated by 315 nucleotides MPMX20_03271: MPMX20_03271 - Long-chain fatty acid transport protein, at 3,442,159 to 3,443,487 _03271 MPMX20_03272: MPMX20_03272 - Intermembrane phospholipid transport system lipoprotein MlaA, at 3,443,532 to 3,444,284 _03272 MPMX20_03273: MPMX20_03273 - Inner membrane protein YfdC, at 3,444,600 to 3,445,529 _03273 Position (kb) 3443 3444 3445Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3442.544 kb on - strand, within MPMX20_03271at 3442.615 kb on - strand, within MPMX20_03271at 3442.622 kb on - strand, within MPMX20_03271at 3442.631 kb on - strand, within MPMX20_03271at 3442.743 kb on - strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.820 kb on - strand, within MPMX20_03271at 3442.820 kb on - strand, within MPMX20_03271at 3442.820 kb on - strand, within MPMX20_03271at 3442.847 kb on + strand, within MPMX20_03271at 3442.855 kb on - strand, within MPMX20_03271at 3442.855 kb on - strand, within MPMX20_03271at 3442.855 kb on - strand, within MPMX20_03271at 3442.944 kb on + strand, within MPMX20_03271at 3442.952 kb on - strand, within MPMX20_03271at 3442.952 kb on - strand, within MPMX20_03271at 3442.966 kb on - strand, within MPMX20_03271at 3442.981 kb on - strand, within MPMX20_03271at 3443.026 kb on - strand, within MPMX20_03271at 3443.086 kb on + strand, within MPMX20_03271at 3443.086 kb on + strand, within MPMX20_03271at 3443.094 kb on - strand, within MPMX20_03271at 3443.094 kb on - strand, within MPMX20_03271at 3443.095 kb on + strand, within MPMX20_03271at 3443.095 kb on + strand, within MPMX20_03271at 3443.100 kb on + strand, within MPMX20_03271at 3443.103 kb on - strand, within MPMX20_03271at 3443.103 kb on - strand, within MPMX20_03271at 3443.103 kb on - strand, within MPMX20_03271at 3443.103 kb on - strand, within MPMX20_03271at 3443.130 kb on + strand, within MPMX20_03271at 3443.208 kb on + strand, within MPMX20_03271at 3443.216 kb on - strand, within MPMX20_03271at 3443.216 kb on - strand, within MPMX20_03271at 3443.216 kb on - strand, within MPMX20_03271at 3443.224 kb on + strand, within MPMX20_03271at 3443.232 kb on + strand, within MPMX20_03271at 3443.259 kb on - strand, within MPMX20_03271at 3443.321 kb on - strand, within MPMX20_03271at 3443.335 kb on + strand, within MPMX20_03271at 3443.338 kb on - strand, within MPMX20_03271at 3443.341 kb on + strand, within MPMX20_03271at 3443.416 kb on - strandat 3443.438 kb on - strandat 3443.438 kb on - strandat 3443.443 kb on + strandat 3443.443 kb on + strandat 3443.443 kb on + strandat 3443.443 kb on + strandat 3443.443 kb on + strandat 3443.444 kb on + strandat 3443.451 kb on - strandat 3443.462 kb on + strandat 3443.497 kb on + strandat 3443.505 kb on - strandat 3443.671 kb on - strand, within MPMX20_03272at 3443.671 kb on - strand, within MPMX20_03272at 3443.721 kb on + strand, within MPMX20_03272at 3443.727 kb on - strand, within MPMX20_03272at 3443.729 kb on - strand, within MPMX20_03272at 3443.771 kb on + strand, within MPMX20_03272at 3444.015 kb on + strand, within MPMX20_03272at 3444.020 kb on + strand, within MPMX20_03272at 3444.020 kb on + strand, within MPMX20_03272at 3444.028 kb on - strand, within MPMX20_03272at 3444.050 kb on + strand, within MPMX20_03272at 3444.165 kb on + strand, within MPMX20_03272at 3444.166 kb on - strand, within MPMX20_03272at 3444.173 kb on - strand, within MPMX20_03272at 3444.173 kb on - strand, within MPMX20_03272at 3444.188 kb on - strand, within MPMX20_03272at 3444.196 kb on + strand, within MPMX20_03272at 3444.204 kb on - strand, within MPMX20_03272at 3444.226 kb on - strandat 3444.226 kb on - strandat 3444.234 kb on + strandat 3444.305 kb on - strandat 3444.333 kb on + strandat 3444.333 kb on - strandat 3444.341 kb on - strandat 3444.404 kb on + strandat 3444.404 kb on + strandat 3444.426 kb on + strandat 3444.431 kb on + strandat 3444.433 kb on + strandat 3444.434 kb on - strandat 3444.436 kb on + strandat 3444.446 kb on - strandat 3444.560 kb on + strandat 3444.587 kb on - strandat 3444.594 kb on - strandat 3444.715 kb on - strand, within MPMX20_03273at 3444.780 kb on + strand, within MPMX20_03273at 3444.804 kb on + strand, within MPMX20_03273at 3444.828 kb on - strand, within MPMX20_03273at 3444.828 kb on - strand, within MPMX20_03273at 3444.839 kb on + strand, within MPMX20_03273at 3444.847 kb on - strand, within MPMX20_03273at 3444.847 kb on - strand, within MPMX20_03273at 3444.848 kb on - strand, within MPMX20_03273at 3444.864 kb on + strand, within MPMX20_03273at 3444.865 kb on - strand, within MPMX20_03273at 3444.904 kb on + strand, within MPMX20_03273at 3444.981 kb on + strand, within MPMX20_03273at 3444.988 kb on + strand, within MPMX20_03273at 3444.996 kb on - strand, within MPMX20_03273at 3444.996 kb on - strand, within MPMX20_03273at 3444.996 kb on - strand, within MPMX20_03273at 3445.020 kb on + strand, within MPMX20_03273at 3445.028 kb on - strand, within MPMX20_03273at 3445.030 kb on + strand, within MPMX20_03273at 3445.030 kb on + strand, within MPMX20_03273at 3445.030 kb on + strand, within MPMX20_03273at 3445.033 kb on + strand, within MPMX20_03273at 3445.061 kb on + strand, within MPMX20_03273at 3445.065 kb on - strand, within MPMX20_03273at 3445.203 kb on - strand, within MPMX20_03273at 3445.245 kb on - strand, within MPMX20_03273at 3445.278 kb on - strand, within MPMX20_03273at 3445.283 kb on + strand, within MPMX20_03273at 3445.283 kb on + strand, within MPMX20_03273

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,442,544 - MPMX20_03271 0.29 -0.4
3,442,615 - MPMX20_03271 0.34 -0.5
3,442,622 - MPMX20_03271 0.35 -0.2
3,442,631 - MPMX20_03271 0.36 -2.6
3,442,743 - MPMX20_03271 0.44 +0.8
3,442,812 + MPMX20_03271 0.49 +0.1
3,442,812 + MPMX20_03271 0.49 -0.2
3,442,812 + MPMX20_03271 0.49 +1.7
3,442,812 + MPMX20_03271 0.49 +0.2
3,442,812 + MPMX20_03271 0.49 -1.5
3,442,812 + MPMX20_03271 0.49 +0.2
3,442,812 + MPMX20_03271 0.49 -2.0
3,442,812 + MPMX20_03271 0.49 -2.1
3,442,812 + MPMX20_03271 0.49 -0.9
3,442,820 - MPMX20_03271 0.50 -2.0
3,442,820 - MPMX20_03271 0.50 -0.1
3,442,820 - MPMX20_03271 0.50 +0.7
3,442,847 + MPMX20_03271 0.52 -0.5
3,442,855 - MPMX20_03271 0.52 -0.2
3,442,855 - MPMX20_03271 0.52 -1.0
3,442,855 - MPMX20_03271 0.52 -0.9
3,442,944 + MPMX20_03271 0.59 +1.9
3,442,952 - MPMX20_03271 0.60 -0.4
3,442,952 - MPMX20_03271 0.60 -1.9
3,442,966 - MPMX20_03271 0.61 -0.7
3,442,981 - MPMX20_03271 0.62 +1.6
3,443,026 - MPMX20_03271 0.65 -0.7
3,443,086 + MPMX20_03271 0.70 -1.4
3,443,086 + MPMX20_03271 0.70 -0.4
3,443,094 - MPMX20_03271 0.70 -1.1
3,443,094 - MPMX20_03271 0.70 -0.2
3,443,095 + MPMX20_03271 0.70 -0.1
3,443,095 + MPMX20_03271 0.70 -1.5
3,443,100 + MPMX20_03271 0.71 -0.4
3,443,103 - MPMX20_03271 0.71 +0.1
3,443,103 - MPMX20_03271 0.71 +0.0
3,443,103 - MPMX20_03271 0.71 -1.5
3,443,103 - MPMX20_03271 0.71 +1.3
3,443,130 + MPMX20_03271 0.73 +0.9
3,443,208 + MPMX20_03271 0.79 +0.6
3,443,216 - MPMX20_03271 0.80 -1.4
3,443,216 - MPMX20_03271 0.80 -0.2
3,443,216 - MPMX20_03271 0.80 -0.5
3,443,224 + MPMX20_03271 0.80 -0.2
3,443,232 + MPMX20_03271 0.81 -0.7
3,443,259 - MPMX20_03271 0.83 -0.2
3,443,321 - MPMX20_03271 0.87 -1.3
3,443,335 + MPMX20_03271 0.88 -0.1
3,443,338 - MPMX20_03271 0.89 +1.9
3,443,341 + MPMX20_03271 0.89 -1.3
3,443,416 - +2.5
3,443,438 - -2.1
3,443,438 - +1.0
3,443,443 + -0.1
3,443,443 + +0.1
3,443,443 + +0.6
3,443,443 + +1.6
3,443,443 + +0.0
3,443,444 + -0.4
3,443,451 - -0.4
3,443,462 + -1.4
3,443,497 + -0.8
3,443,505 - +0.3
3,443,671 - MPMX20_03272 0.18 +0.3
3,443,671 - MPMX20_03272 0.18 -0.7
3,443,721 + MPMX20_03272 0.25 -1.7
3,443,727 - MPMX20_03272 0.26 -0.2
3,443,729 - MPMX20_03272 0.26 -1.1
3,443,771 + MPMX20_03272 0.32 -0.4
3,444,015 + MPMX20_03272 0.64 +0.9
3,444,020 + MPMX20_03272 0.65 -1.2
3,444,020 + MPMX20_03272 0.65 -0.3
3,444,028 - MPMX20_03272 0.66 +2.3
3,444,050 + MPMX20_03272 0.69 -1.1
3,444,165 + MPMX20_03272 0.84 -1.9
3,444,166 - MPMX20_03272 0.84 -2.1
3,444,173 - MPMX20_03272 0.85 +0.2
3,444,173 - MPMX20_03272 0.85 -1.4
3,444,188 - MPMX20_03272 0.87 -0.7
3,444,196 + MPMX20_03272 0.88 -0.8
3,444,204 - MPMX20_03272 0.89 -2.4
3,444,226 - -0.5
3,444,226 - -1.5
3,444,234 + -0.7
3,444,305 - +1.8
3,444,333 + +0.9
3,444,333 - +1.3
3,444,341 - +1.3
3,444,404 + +0.1
3,444,404 + -1.1
3,444,426 + -1.4
3,444,431 + -0.4
3,444,433 + -1.0
3,444,434 - -1.9
3,444,436 + +1.3
3,444,446 - +1.9
3,444,560 + -0.6
3,444,587 - +2.9
3,444,594 - +0.9
3,444,715 - MPMX20_03273 0.12 +2.9
3,444,780 + MPMX20_03273 0.19 -0.9
3,444,804 + MPMX20_03273 0.22 -1.5
3,444,828 - MPMX20_03273 0.25 +1.6
3,444,828 - MPMX20_03273 0.25 +0.6
3,444,839 + MPMX20_03273 0.26 +1.9
3,444,847 - MPMX20_03273 0.27 -1.9
3,444,847 - MPMX20_03273 0.27 -0.1
3,444,848 - MPMX20_03273 0.27 -0.4
3,444,864 + MPMX20_03273 0.28 +0.3
3,444,865 - MPMX20_03273 0.28 -1.8
3,444,904 + MPMX20_03273 0.33 -1.0
3,444,981 + MPMX20_03273 0.41 -1.0
3,444,988 + MPMX20_03273 0.42 -0.5
3,444,996 - MPMX20_03273 0.43 -0.8
3,444,996 - MPMX20_03273 0.43 +0.3
3,444,996 - MPMX20_03273 0.43 -1.2
3,445,020 + MPMX20_03273 0.45 -0.5
3,445,028 - MPMX20_03273 0.46 +1.3
3,445,030 + MPMX20_03273 0.46 -1.0
3,445,030 + MPMX20_03273 0.46 -1.1
3,445,030 + MPMX20_03273 0.46 -0.1
3,445,033 + MPMX20_03273 0.47 -0.6
3,445,061 + MPMX20_03273 0.50 +1.6
3,445,065 - MPMX20_03273 0.50 -0.4
3,445,203 - MPMX20_03273 0.65 -0.1
3,445,245 - MPMX20_03273 0.69 +0.6
3,445,278 - MPMX20_03273 0.73 -0.4
3,445,283 + MPMX20_03273 0.73 +1.9
3,445,283 + MPMX20_03273 0.73 +0.3

Or see this region's nucleotide sequence