Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03242 and MPMX20_03243 overlap by 4 nucleotides MPMX20_03243 and MPMX20_03244 are separated by 88 nucleotides MPMX20_03244 and MPMX20_03245 are separated by 226 nucleotides
MPMX20_03242: MPMX20_03242 - Histidine transport system permease protein HisM, at 3,412,520 to 3,413,236
_03242
MPMX20_03243: MPMX20_03243 - Histidine transport system permease protein HisQ, at 3,413,233 to 3,413,919
_03243
MPMX20_03244: MPMX20_03244 - Histidine-binding periplasmic protein, at 3,414,008 to 3,414,790
_03244
MPMX20_03245: MPMX20_03245 - Lysine/arginine/ornithine-binding periplasmic protein, at 3,415,017 to 3,415,799
_03245
Position (kb)
3414
3415 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3413.042 kb on + strand, within MPMX20_03242 at 3413.193 kb on + strand at 3413.193 kb on + strand at 3413.196 kb on - strand at 3413.244 kb on - strand at 3413.248 kb on + strand at 3413.248 kb on + strand at 3413.248 kb on + strand at 3413.248 kb on + strand at 3413.251 kb on - strand at 3413.256 kb on - strand at 3413.278 kb on - strand at 3413.337 kb on + strand, within MPMX20_03243 at 3413.345 kb on - strand, within MPMX20_03243 at 3413.352 kb on + strand, within MPMX20_03243 at 3413.352 kb on + strand, within MPMX20_03243 at 3413.397 kb on + strand, within MPMX20_03243 at 3413.457 kb on - strand, within MPMX20_03243 at 3413.477 kb on - strand, within MPMX20_03243 at 3413.511 kb on + strand, within MPMX20_03243 at 3413.511 kb on + strand, within MPMX20_03243 at 3413.519 kb on - strand, within MPMX20_03243 at 3413.567 kb on + strand, within MPMX20_03243 at 3413.575 kb on - strand, within MPMX20_03243 at 3413.633 kb on - strand, within MPMX20_03243 at 3413.697 kb on - strand, within MPMX20_03243 at 3413.702 kb on - strand, within MPMX20_03243 at 3413.798 kb on + strand, within MPMX20_03243 at 3413.798 kb on + strand, within MPMX20_03243 at 3413.829 kb on - strand, within MPMX20_03243 at 3413.854 kb on + strand at 3413.865 kb on + strand at 3413.865 kb on + strand at 3413.865 kb on + strand at 3413.924 kb on - strand at 3413.955 kb on - strand at 3414.092 kb on + strand, within MPMX20_03244 at 3414.105 kb on - strand, within MPMX20_03244 at 3414.138 kb on - strand, within MPMX20_03244 at 3414.138 kb on - strand, within MPMX20_03244 at 3414.138 kb on - strand, within MPMX20_03244 at 3414.138 kb on - strand, within MPMX20_03244 at 3414.219 kb on - strand, within MPMX20_03244 at 3414.245 kb on - strand, within MPMX20_03244 at 3414.278 kb on - strand, within MPMX20_03244 at 3414.356 kb on + strand, within MPMX20_03244 at 3414.412 kb on - strand, within MPMX20_03244 at 3414.440 kb on + strand, within MPMX20_03244 at 3414.448 kb on - strand, within MPMX20_03244 at 3414.585 kb on + strand, within MPMX20_03244 at 3414.619 kb on - strand, within MPMX20_03244 at 3414.631 kb on - strand, within MPMX20_03244 at 3414.687 kb on - strand, within MPMX20_03244 at 3414.691 kb on + strand, within MPMX20_03244 at 3414.699 kb on - strand, within MPMX20_03244 at 3414.699 kb on - strand, within MPMX20_03244 at 3414.832 kb on + strand at 3414.842 kb on + strand at 3414.842 kb on + strand at 3414.850 kb on - strand at 3414.862 kb on - strand at 3414.937 kb on + strand at 3414.945 kb on - strand at 3414.945 kb on - strand at 3415.007 kb on - strand at 3415.007 kb on - strand at 3415.230 kb on + strand, within MPMX20_03245 at 3415.230 kb on + strand, within MPMX20_03245 at 3415.286 kb on + strand, within MPMX20_03245 at 3415.294 kb on - strand, within MPMX20_03245 at 3415.299 kb on - strand, within MPMX20_03245 at 3415.364 kb on - strand, within MPMX20_03245 at 3415.378 kb on + strand, within MPMX20_03245 at 3415.385 kb on - strand, within MPMX20_03245 at 3415.420 kb on - strand, within MPMX20_03245 at 3415.476 kb on - strand, within MPMX20_03245 at 3415.476 kb on - strand, within MPMX20_03245 at 3415.523 kb on - strand, within MPMX20_03245 at 3415.529 kb on + strand, within MPMX20_03245 at 3415.595 kb on - strand, within MPMX20_03245 at 3415.681 kb on - strand, within MPMX20_03245 at 3415.681 kb on - strand, within MPMX20_03245 at 3415.696 kb on - strand, within MPMX20_03245 at 3415.700 kb on + strand, within MPMX20_03245 at 3415.703 kb on - strand, within MPMX20_03245 at 3415.703 kb on - strand, within MPMX20_03245 at 3415.718 kb on - strand, within MPMX20_03245 at 3415.759 kb on + strand at 3415.779 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,413,042 + MPMX20_03242 0.73 -0.6 3,413,193 + -1.5 3,413,193 + -0.3 3,413,196 - -1.3 3,413,244 - -0.3 3,413,248 + +0.9 3,413,248 + -1.2 3,413,248 + -0.6 3,413,248 + -1.0 3,413,251 - +0.1 3,413,256 - -1.7 3,413,278 - -1.4 3,413,337 + MPMX20_03243 0.15 -1.2 3,413,345 - MPMX20_03243 0.16 -0.5 3,413,352 + MPMX20_03243 0.17 -0.1 3,413,352 + MPMX20_03243 0.17 -0.7 3,413,397 + MPMX20_03243 0.24 +1.9 3,413,457 - MPMX20_03243 0.33 +0.6 3,413,477 - MPMX20_03243 0.36 +0.3 3,413,511 + MPMX20_03243 0.40 -1.0 3,413,511 + MPMX20_03243 0.40 -2.0 3,413,519 - MPMX20_03243 0.42 -0.1 3,413,567 + MPMX20_03243 0.49 -0.3 3,413,575 - MPMX20_03243 0.50 -2.5 3,413,633 - MPMX20_03243 0.58 +0.3 3,413,697 - MPMX20_03243 0.68 -1.5 3,413,702 - MPMX20_03243 0.68 +2.9 3,413,798 + MPMX20_03243 0.82 -0.1 3,413,798 + MPMX20_03243 0.82 -1.8 3,413,829 - MPMX20_03243 0.87 -1.7 3,413,854 + +0.0 3,413,865 + -2.8 3,413,865 + +1.9 3,413,865 + -1.0 3,413,924 - +0.9 3,413,955 - -0.3 3,414,092 + MPMX20_03244 0.11 +0.2 3,414,105 - MPMX20_03244 0.12 +2.9 3,414,138 - MPMX20_03244 0.17 -1.4 3,414,138 - MPMX20_03244 0.17 -1.4 3,414,138 - MPMX20_03244 0.17 -1.0 3,414,138 - MPMX20_03244 0.17 -1.2 3,414,219 - MPMX20_03244 0.27 -0.8 3,414,245 - MPMX20_03244 0.30 -1.3 3,414,278 - MPMX20_03244 0.34 -0.3 3,414,356 + MPMX20_03244 0.44 -0.1 3,414,412 - MPMX20_03244 0.52 -0.4 3,414,440 + MPMX20_03244 0.55 -2.4 3,414,448 - MPMX20_03244 0.56 -1.3 3,414,585 + MPMX20_03244 0.74 -2.2 3,414,619 - MPMX20_03244 0.78 +1.6 3,414,631 - MPMX20_03244 0.80 -1.7 3,414,687 - MPMX20_03244 0.87 -0.5 3,414,691 + MPMX20_03244 0.87 -1.5 3,414,699 - MPMX20_03244 0.88 -0.9 3,414,699 - MPMX20_03244 0.88 -1.4 3,414,832 + +0.5 3,414,842 + +0.0 3,414,842 + -0.4 3,414,850 - -2.5 3,414,862 - +1.1 3,414,937 + -0.5 3,414,945 - -0.2 3,414,945 - +1.3 3,415,007 - -0.5 3,415,007 - +0.6 3,415,230 + MPMX20_03245 0.27 -1.7 3,415,230 + MPMX20_03245 0.27 +0.0 3,415,286 + MPMX20_03245 0.34 -0.4 3,415,294 - MPMX20_03245 0.35 -0.5 3,415,299 - MPMX20_03245 0.36 -1.1 3,415,364 - MPMX20_03245 0.44 -0.5 3,415,378 + MPMX20_03245 0.46 +1.3 3,415,385 - MPMX20_03245 0.47 -0.8 3,415,420 - MPMX20_03245 0.51 +0.7 3,415,476 - MPMX20_03245 0.59 -0.3 3,415,476 - MPMX20_03245 0.59 +0.1 3,415,523 - MPMX20_03245 0.65 -0.6 3,415,529 + MPMX20_03245 0.65 +1.2 3,415,595 - MPMX20_03245 0.74 +0.1 3,415,681 - MPMX20_03245 0.85 -1.1 3,415,681 - MPMX20_03245 0.85 -1.2 3,415,696 - MPMX20_03245 0.87 +1.9 3,415,700 + MPMX20_03245 0.87 -0.4 3,415,703 - MPMX20_03245 0.88 -0.5 3,415,703 - MPMX20_03245 0.88 -0.5 3,415,718 - MPMX20_03245 0.90 -0.7 3,415,759 + -2.0 3,415,779 + -1.2
Or see this region's nucleotide sequence