Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03244

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03242 and MPMX20_03243 overlap by 4 nucleotidesMPMX20_03243 and MPMX20_03244 are separated by 88 nucleotidesMPMX20_03244 and MPMX20_03245 are separated by 226 nucleotides MPMX20_03242: MPMX20_03242 - Histidine transport system permease protein HisM, at 3,412,520 to 3,413,236 _03242 MPMX20_03243: MPMX20_03243 - Histidine transport system permease protein HisQ, at 3,413,233 to 3,413,919 _03243 MPMX20_03244: MPMX20_03244 - Histidine-binding periplasmic protein, at 3,414,008 to 3,414,790 _03244 MPMX20_03245: MPMX20_03245 - Lysine/arginine/ornithine-binding periplasmic protein, at 3,415,017 to 3,415,799 _03245 Position (kb) 3414 3415Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3413.042 kb on + strand, within MPMX20_03242at 3413.193 kb on + strandat 3413.193 kb on + strandat 3413.196 kb on - strandat 3413.244 kb on - strandat 3413.248 kb on + strandat 3413.248 kb on + strandat 3413.248 kb on + strandat 3413.248 kb on + strandat 3413.251 kb on - strandat 3413.256 kb on - strandat 3413.278 kb on - strandat 3413.337 kb on + strand, within MPMX20_03243at 3413.345 kb on - strand, within MPMX20_03243at 3413.352 kb on + strand, within MPMX20_03243at 3413.352 kb on + strand, within MPMX20_03243at 3413.397 kb on + strand, within MPMX20_03243at 3413.457 kb on - strand, within MPMX20_03243at 3413.477 kb on - strand, within MPMX20_03243at 3413.511 kb on + strand, within MPMX20_03243at 3413.511 kb on + strand, within MPMX20_03243at 3413.519 kb on - strand, within MPMX20_03243at 3413.567 kb on + strand, within MPMX20_03243at 3413.575 kb on - strand, within MPMX20_03243at 3413.633 kb on - strand, within MPMX20_03243at 3413.697 kb on - strand, within MPMX20_03243at 3413.702 kb on - strand, within MPMX20_03243at 3413.798 kb on + strand, within MPMX20_03243at 3413.798 kb on + strand, within MPMX20_03243at 3413.829 kb on - strand, within MPMX20_03243at 3413.854 kb on + strandat 3413.865 kb on + strandat 3413.865 kb on + strandat 3413.865 kb on + strandat 3413.924 kb on - strandat 3413.955 kb on - strandat 3414.092 kb on + strand, within MPMX20_03244at 3414.105 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.138 kb on - strand, within MPMX20_03244at 3414.219 kb on - strand, within MPMX20_03244at 3414.245 kb on - strand, within MPMX20_03244at 3414.278 kb on - strand, within MPMX20_03244at 3414.356 kb on + strand, within MPMX20_03244at 3414.412 kb on - strand, within MPMX20_03244at 3414.440 kb on + strand, within MPMX20_03244at 3414.448 kb on - strand, within MPMX20_03244at 3414.585 kb on + strand, within MPMX20_03244at 3414.619 kb on - strand, within MPMX20_03244at 3414.631 kb on - strand, within MPMX20_03244at 3414.687 kb on - strand, within MPMX20_03244at 3414.691 kb on + strand, within MPMX20_03244at 3414.699 kb on - strand, within MPMX20_03244at 3414.699 kb on - strand, within MPMX20_03244at 3414.832 kb on + strandat 3414.842 kb on + strandat 3414.842 kb on + strandat 3414.850 kb on - strandat 3414.862 kb on - strandat 3414.937 kb on + strandat 3414.945 kb on - strandat 3414.945 kb on - strandat 3415.007 kb on - strandat 3415.007 kb on - strandat 3415.230 kb on + strand, within MPMX20_03245at 3415.230 kb on + strand, within MPMX20_03245at 3415.286 kb on + strand, within MPMX20_03245at 3415.294 kb on - strand, within MPMX20_03245at 3415.299 kb on - strand, within MPMX20_03245at 3415.364 kb on - strand, within MPMX20_03245at 3415.378 kb on + strand, within MPMX20_03245at 3415.385 kb on - strand, within MPMX20_03245at 3415.420 kb on - strand, within MPMX20_03245at 3415.476 kb on - strand, within MPMX20_03245at 3415.476 kb on - strand, within MPMX20_03245at 3415.523 kb on - strand, within MPMX20_03245at 3415.529 kb on + strand, within MPMX20_03245at 3415.595 kb on - strand, within MPMX20_03245at 3415.681 kb on - strand, within MPMX20_03245at 3415.681 kb on - strand, within MPMX20_03245at 3415.696 kb on - strand, within MPMX20_03245at 3415.700 kb on + strand, within MPMX20_03245at 3415.703 kb on - strand, within MPMX20_03245at 3415.703 kb on - strand, within MPMX20_03245at 3415.718 kb on - strand, within MPMX20_03245at 3415.759 kb on + strandat 3415.779 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,413,042 + MPMX20_03242 0.73 -0.6
3,413,193 + -1.5
3,413,193 + -0.3
3,413,196 - -1.3
3,413,244 - -0.3
3,413,248 + +0.9
3,413,248 + -1.2
3,413,248 + -0.6
3,413,248 + -1.0
3,413,251 - +0.1
3,413,256 - -1.7
3,413,278 - -1.4
3,413,337 + MPMX20_03243 0.15 -1.2
3,413,345 - MPMX20_03243 0.16 -0.5
3,413,352 + MPMX20_03243 0.17 -0.1
3,413,352 + MPMX20_03243 0.17 -0.7
3,413,397 + MPMX20_03243 0.24 +1.9
3,413,457 - MPMX20_03243 0.33 +0.6
3,413,477 - MPMX20_03243 0.36 +0.3
3,413,511 + MPMX20_03243 0.40 -1.0
3,413,511 + MPMX20_03243 0.40 -2.0
3,413,519 - MPMX20_03243 0.42 -0.1
3,413,567 + MPMX20_03243 0.49 -0.3
3,413,575 - MPMX20_03243 0.50 -2.5
3,413,633 - MPMX20_03243 0.58 +0.3
3,413,697 - MPMX20_03243 0.68 -1.5
3,413,702 - MPMX20_03243 0.68 +2.9
3,413,798 + MPMX20_03243 0.82 -0.1
3,413,798 + MPMX20_03243 0.82 -1.8
3,413,829 - MPMX20_03243 0.87 -1.7
3,413,854 + +0.0
3,413,865 + -2.8
3,413,865 + +1.9
3,413,865 + -1.0
3,413,924 - +0.9
3,413,955 - -0.3
3,414,092 + MPMX20_03244 0.11 +0.2
3,414,105 - MPMX20_03244 0.12 +2.9
3,414,138 - MPMX20_03244 0.17 -1.4
3,414,138 - MPMX20_03244 0.17 -1.4
3,414,138 - MPMX20_03244 0.17 -1.0
3,414,138 - MPMX20_03244 0.17 -1.2
3,414,219 - MPMX20_03244 0.27 -0.8
3,414,245 - MPMX20_03244 0.30 -1.3
3,414,278 - MPMX20_03244 0.34 -0.3
3,414,356 + MPMX20_03244 0.44 -0.1
3,414,412 - MPMX20_03244 0.52 -0.4
3,414,440 + MPMX20_03244 0.55 -2.4
3,414,448 - MPMX20_03244 0.56 -1.3
3,414,585 + MPMX20_03244 0.74 -2.2
3,414,619 - MPMX20_03244 0.78 +1.6
3,414,631 - MPMX20_03244 0.80 -1.7
3,414,687 - MPMX20_03244 0.87 -0.5
3,414,691 + MPMX20_03244 0.87 -1.5
3,414,699 - MPMX20_03244 0.88 -0.9
3,414,699 - MPMX20_03244 0.88 -1.4
3,414,832 + +0.5
3,414,842 + +0.0
3,414,842 + -0.4
3,414,850 - -2.5
3,414,862 - +1.1
3,414,937 + -0.5
3,414,945 - -0.2
3,414,945 - +1.3
3,415,007 - -0.5
3,415,007 - +0.6
3,415,230 + MPMX20_03245 0.27 -1.7
3,415,230 + MPMX20_03245 0.27 +0.0
3,415,286 + MPMX20_03245 0.34 -0.4
3,415,294 - MPMX20_03245 0.35 -0.5
3,415,299 - MPMX20_03245 0.36 -1.1
3,415,364 - MPMX20_03245 0.44 -0.5
3,415,378 + MPMX20_03245 0.46 +1.3
3,415,385 - MPMX20_03245 0.47 -0.8
3,415,420 - MPMX20_03245 0.51 +0.7
3,415,476 - MPMX20_03245 0.59 -0.3
3,415,476 - MPMX20_03245 0.59 +0.1
3,415,523 - MPMX20_03245 0.65 -0.6
3,415,529 + MPMX20_03245 0.65 +1.2
3,415,595 - MPMX20_03245 0.74 +0.1
3,415,681 - MPMX20_03245 0.85 -1.1
3,415,681 - MPMX20_03245 0.85 -1.2
3,415,696 - MPMX20_03245 0.87 +1.9
3,415,700 + MPMX20_03245 0.87 -0.4
3,415,703 - MPMX20_03245 0.88 -0.5
3,415,703 - MPMX20_03245 0.88 -0.5
3,415,718 - MPMX20_03245 0.90 -0.7
3,415,759 + -2.0
3,415,779 + -1.2

Or see this region's nucleotide sequence