Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03224

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03222 and MPMX20_03223 are separated by 75 nucleotidesMPMX20_03223 and MPMX20_03224 are separated by 11 nucleotidesMPMX20_03224 and MPMX20_03225 are separated by 92 nucleotidesMPMX20_03225 and MPMX20_03226 are separated by 337 nucleotides MPMX20_03222: MPMX20_03222 - hypothetical protein, at 3,394,492 to 3,396,324 _03222 MPMX20_03223: MPMX20_03223 - Hexitol phosphatase A, at 3,396,400 to 3,397,059 _03223 MPMX20_03224: MPMX20_03224 - hypothetical protein, at 3,397,071 to 3,397,565 _03224 MPMX20_03225: MPMX20_03225 - hypothetical protein, at 3,397,658 to 3,398,113 _03225 MPMX20_03226: MPMX20_03226 - Acetate kinase, at 3,398,451 to 3,399,653 _03226 Position (kb) 3397 3398Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 3396.107 kb on + strand, within MPMX20_03222at 3396.158 kb on - strandat 3396.200 kb on + strandat 3396.210 kb on + strandat 3396.210 kb on + strandat 3396.210 kb on + strandat 3396.284 kb on + strandat 3396.302 kb on + strandat 3396.346 kb on - strandat 3396.419 kb on + strandat 3396.426 kb on - strandat 3396.426 kb on - strandat 3396.428 kb on - strandat 3396.496 kb on + strand, within MPMX20_03223at 3396.556 kb on + strand, within MPMX20_03223at 3396.574 kb on - strand, within MPMX20_03223at 3396.597 kb on + strand, within MPMX20_03223at 3396.612 kb on + strand, within MPMX20_03223at 3396.620 kb on - strand, within MPMX20_03223at 3396.620 kb on - strand, within MPMX20_03223at 3396.620 kb on - strand, within MPMX20_03223at 3396.679 kb on + strand, within MPMX20_03223at 3396.712 kb on - strand, within MPMX20_03223at 3396.750 kb on - strand, within MPMX20_03223at 3396.797 kb on + strand, within MPMX20_03223at 3396.841 kb on - strand, within MPMX20_03223at 3396.851 kb on - strand, within MPMX20_03223at 3396.851 kb on - strand, within MPMX20_03223at 3396.919 kb on - strand, within MPMX20_03223at 3396.919 kb on - strand, within MPMX20_03223at 3397.046 kb on + strandat 3397.046 kb on + strandat 3397.046 kb on + strandat 3397.046 kb on + strandat 3397.054 kb on + strandat 3397.054 kb on - strandat 3397.054 kb on - strandat 3397.054 kb on - strandat 3397.054 kb on - strandat 3397.054 kb on - strandat 3397.065 kb on + strandat 3397.146 kb on - strand, within MPMX20_03224at 3397.181 kb on + strand, within MPMX20_03224at 3397.187 kb on + strand, within MPMX20_03224at 3397.189 kb on - strand, within MPMX20_03224at 3397.189 kb on - strand, within MPMX20_03224at 3397.203 kb on + strand, within MPMX20_03224at 3397.226 kb on - strand, within MPMX20_03224at 3397.258 kb on - strand, within MPMX20_03224at 3397.259 kb on - strand, within MPMX20_03224at 3397.277 kb on + strand, within MPMX20_03224at 3397.367 kb on + strand, within MPMX20_03224at 3397.409 kb on + strand, within MPMX20_03224at 3397.417 kb on - strand, within MPMX20_03224at 3397.427 kb on + strand, within MPMX20_03224at 3397.435 kb on - strand, within MPMX20_03224at 3397.435 kb on - strand, within MPMX20_03224at 3397.450 kb on - strand, within MPMX20_03224at 3397.497 kb on - strand, within MPMX20_03224at 3397.562 kb on - strandat 3397.576 kb on - strandat 3397.591 kb on - strandat 3397.613 kb on + strandat 3397.617 kb on + strandat 3397.718 kb on - strand, within MPMX20_03225at 3397.747 kb on - strand, within MPMX20_03225at 3397.753 kb on - strand, within MPMX20_03225at 3397.815 kb on + strand, within MPMX20_03225at 3397.850 kb on + strand, within MPMX20_03225at 3397.910 kb on - strand, within MPMX20_03225at 3397.910 kb on - strand, within MPMX20_03225at 3397.939 kb on + strand, within MPMX20_03225at 3398.013 kb on - strand, within MPMX20_03225at 3398.057 kb on - strand, within MPMX20_03225at 3398.057 kb on - strand, within MPMX20_03225at 3398.103 kb on + strandat 3398.103 kb on + strandat 3398.177 kb on - strandat 3398.177 kb on - strandat 3398.253 kb on + strandat 3398.253 kb on - strandat 3398.469 kb on - strandat 3398.472 kb on + strandat 3398.480 kb on - strandat 3398.480 kb on - strandat 3398.519 kb on + strandat 3398.537 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,396,107 + MPMX20_03222 0.88 -0.1
3,396,158 - +0.9
3,396,200 + +0.1
3,396,210 + +0.6
3,396,210 + +1.7
3,396,210 + -0.2
3,396,284 + -0.7
3,396,302 + +0.4
3,396,346 - -0.1
3,396,419 + -0.2
3,396,426 - +2.9
3,396,426 - -0.6
3,396,428 - -3.8
3,396,496 + MPMX20_03223 0.15 +0.8
3,396,556 + MPMX20_03223 0.24 -1.7
3,396,574 - MPMX20_03223 0.26 +0.1
3,396,597 + MPMX20_03223 0.30 -0.1
3,396,612 + MPMX20_03223 0.32 +0.1
3,396,620 - MPMX20_03223 0.33 -0.3
3,396,620 - MPMX20_03223 0.33 +3.8
3,396,620 - MPMX20_03223 0.33 +0.0
3,396,679 + MPMX20_03223 0.42 +0.9
3,396,712 - MPMX20_03223 0.47 +0.6
3,396,750 - MPMX20_03223 0.53 -0.6
3,396,797 + MPMX20_03223 0.60 +0.3
3,396,841 - MPMX20_03223 0.67 +0.7
3,396,851 - MPMX20_03223 0.68 +0.2
3,396,851 - MPMX20_03223 0.68 +1.6
3,396,919 - MPMX20_03223 0.79 +0.6
3,396,919 - MPMX20_03223 0.79 -0.2
3,397,046 + +0.0
3,397,046 + -0.1
3,397,046 + +2.3
3,397,046 + -0.5
3,397,054 + -0.1
3,397,054 - +1.2
3,397,054 - +0.6
3,397,054 - +0.0
3,397,054 - -1.2
3,397,054 - +0.2
3,397,065 + +0.6
3,397,146 - MPMX20_03224 0.15 -0.9
3,397,181 + MPMX20_03224 0.22 +1.9
3,397,187 + MPMX20_03224 0.23 +0.9
3,397,189 - MPMX20_03224 0.24 -0.8
3,397,189 - MPMX20_03224 0.24 +0.6
3,397,203 + MPMX20_03224 0.27 -0.4
3,397,226 - MPMX20_03224 0.31 -1.6
3,397,258 - MPMX20_03224 0.38 -0.4
3,397,259 - MPMX20_03224 0.38 -0.8
3,397,277 + MPMX20_03224 0.42 -2.1
3,397,367 + MPMX20_03224 0.60 -0.2
3,397,409 + MPMX20_03224 0.68 -1.9
3,397,417 - MPMX20_03224 0.70 -1.1
3,397,427 + MPMX20_03224 0.72 -0.1
3,397,435 - MPMX20_03224 0.74 -1.5
3,397,435 - MPMX20_03224 0.74 +2.2
3,397,450 - MPMX20_03224 0.77 -1.5
3,397,497 - MPMX20_03224 0.86 -1.2
3,397,562 - -1.9
3,397,576 - +0.1
3,397,591 - -1.4
3,397,613 + -1.2
3,397,617 + -1.7
3,397,718 - MPMX20_03225 0.13 +0.8
3,397,747 - MPMX20_03225 0.20 +0.9
3,397,753 - MPMX20_03225 0.21 -0.5
3,397,815 + MPMX20_03225 0.34 +0.9
3,397,850 + MPMX20_03225 0.42 -2.5
3,397,910 - MPMX20_03225 0.55 -3.0
3,397,910 - MPMX20_03225 0.55 -2.5
3,397,939 + MPMX20_03225 0.62 +0.2
3,398,013 - MPMX20_03225 0.78 -1.1
3,398,057 - MPMX20_03225 0.88 -0.7
3,398,057 - MPMX20_03225 0.88 +0.1
3,398,103 + -0.4
3,398,103 + -1.5
3,398,177 - +0.3
3,398,177 - +0.9
3,398,253 + -0.5
3,398,253 - -0.7
3,398,469 - -0.7
3,398,472 + +0.3
3,398,480 - +0.1
3,398,480 - +0.9
3,398,519 + +0.6
3,398,537 + +0.3

Or see this region's nucleotide sequence