Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03095

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03094 and MPMX20_03095 are separated by 69 nucleotidesMPMX20_03095 and MPMX20_03096 overlap by 26 nucleotidesMPMX20_03096 and MPMX20_03097 overlap by 17 nucleotides MPMX20_03094: MPMX20_03094 - HTH-type transcriptional regulator MlrA, at 3,247,503 to 3,248,243 _03094 MPMX20_03095: MPMX20_03095 - hypothetical protein, at 3,248,313 to 3,248,426 _03095 MPMX20_03096: MPMX20_03096 - Glycine betaine uptake system permease protein YehW, at 3,248,401 to 3,249,138 _03096 MPMX20_03097: MPMX20_03097 - Glycine betaine uptake system ATP-binding protein YehX, at 3,249,122 to 3,250,072 _03097 Position (kb) 3248 3249Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3247.315 kb on + strandat 3247.386 kb on - strandat 3247.483 kb on + strandat 3247.491 kb on - strandat 3247.543 kb on - strandat 3247.579 kb on + strand, within MPMX20_03094at 3247.611 kb on - strand, within MPMX20_03094at 3247.681 kb on - strand, within MPMX20_03094at 3247.810 kb on + strand, within MPMX20_03094at 3247.884 kb on - strand, within MPMX20_03094at 3247.925 kb on + strand, within MPMX20_03094at 3248.016 kb on - strand, within MPMX20_03094at 3248.085 kb on + strand, within MPMX20_03094at 3248.186 kb on - strandat 3248.204 kb on + strandat 3248.254 kb on - strandat 3248.256 kb on - strandat 3248.268 kb on - strandat 3248.278 kb on + strandat 3248.286 kb on - strandat 3248.385 kb on - strand, within MPMX20_03095at 3248.385 kb on - strand, within MPMX20_03095at 3248.385 kb on - strand, within MPMX20_03095at 3248.654 kb on + strand, within MPMX20_03096at 3248.681 kb on + strand, within MPMX20_03096at 3248.697 kb on - strand, within MPMX20_03096at 3248.724 kb on + strand, within MPMX20_03096at 3248.916 kb on - strand, within MPMX20_03096at 3248.936 kb on - strand, within MPMX20_03096at 3249.107 kb on + strandat 3249.115 kb on - strandat 3249.139 kb on - strandat 3249.146 kb on - strandat 3249.183 kb on - strandat 3249.263 kb on + strand, within MPMX20_03097at 3249.332 kb on - strand, within MPMX20_03097at 3249.409 kb on - strand, within MPMX20_03097

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,247,315 + -0.1
3,247,386 - +0.3
3,247,483 + -1.1
3,247,491 - +0.5
3,247,543 - -1.2
3,247,579 + MPMX20_03094 0.10 +2.9
3,247,611 - MPMX20_03094 0.15 +1.3
3,247,681 - MPMX20_03094 0.24 +2.6
3,247,810 + MPMX20_03094 0.41 -1.0
3,247,884 - MPMX20_03094 0.51 -0.4
3,247,925 + MPMX20_03094 0.57 +0.2
3,248,016 - MPMX20_03094 0.69 -0.5
3,248,085 + MPMX20_03094 0.79 -0.4
3,248,186 - -1.1
3,248,204 + -0.9
3,248,254 - -0.8
3,248,256 - +2.9
3,248,268 - -1.1
3,248,278 + -0.6
3,248,286 - +0.2
3,248,385 - MPMX20_03095 0.63 +1.9
3,248,385 - MPMX20_03095 0.63 +0.4
3,248,385 - MPMX20_03095 0.63 -0.3
3,248,654 + MPMX20_03096 0.34 -1.3
3,248,681 + MPMX20_03096 0.38 -1.3
3,248,697 - MPMX20_03096 0.40 -0.6
3,248,724 + MPMX20_03096 0.44 -0.3
3,248,916 - MPMX20_03096 0.70 +0.1
3,248,936 - MPMX20_03096 0.72 -1.0
3,249,107 + -1.0
3,249,115 - +1.9
3,249,139 - -1.6
3,249,146 - -0.1
3,249,183 - -1.9
3,249,263 + MPMX20_03097 0.15 -0.9
3,249,332 - MPMX20_03097 0.22 -1.8
3,249,409 - MPMX20_03097 0.30 -0.5

Or see this region's nucleotide sequence