Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02375

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02374 and MPMX20_02375 are separated by 166 nucleotidesMPMX20_02375 and MPMX20_02376 are separated by 43 nucleotidesMPMX20_02376 and MPMX20_02377 overlap by 8 nucleotides MPMX20_02374: MPMX20_02374 - Putative transporter AraJ, at 2,502,385 to 2,503,563 _02374 MPMX20_02375: MPMX20_02375 - Polyphosphate:ADP phosphotransferase 3, at 2,503,730 to 2,504,548 _02375 MPMX20_02376: MPMX20_02376 - Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit, at 2,504,592 to 2,505,245 _02376 MPMX20_02377: MPMX20_02377 - Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit, at 2,505,238 to 2,506,122 _02377 Position (kb) 2503 2504 2505Strain fitness (log2 ratio) -2 -1 0 1 2at 2502.737 kb on + strand, within MPMX20_02374at 2502.745 kb on - strand, within MPMX20_02374at 2502.782 kb on - strand, within MPMX20_02374at 2502.823 kb on + strand, within MPMX20_02374at 2502.902 kb on + strand, within MPMX20_02374at 2502.902 kb on + strand, within MPMX20_02374at 2502.902 kb on + strand, within MPMX20_02374at 2502.912 kb on - strand, within MPMX20_02374at 2503.016 kb on + strand, within MPMX20_02374at 2503.022 kb on - strand, within MPMX20_02374at 2503.031 kb on + strand, within MPMX20_02374at 2503.039 kb on - strand, within MPMX20_02374at 2503.039 kb on - strand, within MPMX20_02374at 2503.039 kb on - strand, within MPMX20_02374at 2503.039 kb on - strand, within MPMX20_02374at 2503.041 kb on + strand, within MPMX20_02374at 2503.044 kb on - strand, within MPMX20_02374at 2503.044 kb on - strand, within MPMX20_02374at 2503.061 kb on + strand, within MPMX20_02374at 2503.061 kb on + strand, within MPMX20_02374at 2503.069 kb on - strand, within MPMX20_02374at 2503.104 kb on + strand, within MPMX20_02374at 2503.121 kb on + strand, within MPMX20_02374at 2503.124 kb on - strand, within MPMX20_02374at 2503.126 kb on - strand, within MPMX20_02374at 2503.128 kb on + strand, within MPMX20_02374at 2503.128 kb on + strand, within MPMX20_02374at 2503.138 kb on + strand, within MPMX20_02374at 2503.192 kb on - strand, within MPMX20_02374at 2503.273 kb on + strand, within MPMX20_02374at 2503.328 kb on + strand, within MPMX20_02374at 2503.369 kb on + strand, within MPMX20_02374at 2503.384 kb on - strand, within MPMX20_02374at 2503.411 kb on - strand, within MPMX20_02374at 2503.413 kb on + strand, within MPMX20_02374at 2503.421 kb on - strand, within MPMX20_02374at 2503.476 kb on - strandat 2503.521 kb on + strandat 2503.521 kb on + strandat 2503.576 kb on + strandat 2503.576 kb on + strandat 2503.584 kb on - strandat 2503.610 kb on + strandat 2503.634 kb on - strandat 2503.634 kb on - strandat 2503.640 kb on + strandat 2503.676 kb on - strandat 2503.676 kb on - strandat 2503.684 kb on - strandat 2503.708 kb on + strandat 2503.713 kb on + strandat 2503.722 kb on - strandat 2503.766 kb on - strandat 2503.774 kb on + strandat 2503.774 kb on - strandat 2503.824 kb on + strand, within MPMX20_02375at 2503.834 kb on + strand, within MPMX20_02375at 2503.834 kb on + strand, within MPMX20_02375at 2503.834 kb on + strand, within MPMX20_02375at 2503.834 kb on + strand, within MPMX20_02375at 2503.834 kb on + strand, within MPMX20_02375at 2503.834 kb on + strand, within MPMX20_02375at 2503.842 kb on - strand, within MPMX20_02375at 2503.842 kb on - strand, within MPMX20_02375at 2503.874 kb on - strand, within MPMX20_02375at 2503.874 kb on - strand, within MPMX20_02375at 2503.892 kb on - strand, within MPMX20_02375at 2503.920 kb on + strand, within MPMX20_02375at 2503.983 kb on - strand, within MPMX20_02375at 2504.022 kb on + strand, within MPMX20_02375at 2504.030 kb on - strand, within MPMX20_02375at 2504.118 kb on - strand, within MPMX20_02375at 2504.123 kb on - strand, within MPMX20_02375at 2504.123 kb on - strand, within MPMX20_02375at 2504.258 kb on + strand, within MPMX20_02375at 2504.323 kb on - strand, within MPMX20_02375at 2504.350 kb on + strand, within MPMX20_02375at 2504.356 kb on - strand, within MPMX20_02375at 2504.369 kb on - strand, within MPMX20_02375at 2504.485 kb on + strandat 2504.485 kb on + strandat 2504.493 kb on - strandat 2504.493 kb on - strandat 2504.529 kb on + strandat 2504.646 kb on + strandat 2504.691 kb on + strand, within MPMX20_02376at 2504.731 kb on + strand, within MPMX20_02376at 2504.739 kb on - strand, within MPMX20_02376at 2504.742 kb on - strand, within MPMX20_02376at 2504.750 kb on + strand, within MPMX20_02376at 2504.753 kb on - strand, within MPMX20_02376at 2504.758 kb on - strand, within MPMX20_02376at 2504.828 kb on + strand, within MPMX20_02376at 2504.941 kb on + strand, within MPMX20_02376at 2504.941 kb on + strand, within MPMX20_02376at 2504.941 kb on + strand, within MPMX20_02376at 2504.950 kb on - strand, within MPMX20_02376at 2504.951 kb on - strand, within MPMX20_02376at 2504.977 kb on + strand, within MPMX20_02376at 2504.985 kb on - strand, within MPMX20_02376at 2505.042 kb on - strand, within MPMX20_02376at 2505.050 kb on - strand, within MPMX20_02376at 2505.101 kb on - strand, within MPMX20_02376at 2505.104 kb on + strand, within MPMX20_02376at 2505.123 kb on + strand, within MPMX20_02376at 2505.190 kb on + strandat 2505.229 kb on + strandat 2505.241 kb on + strandat 2505.377 kb on - strand, within MPMX20_02377at 2505.436 kb on + strand, within MPMX20_02377at 2505.436 kb on - strand, within MPMX20_02377at 2505.444 kb on - strand, within MPMX20_02377at 2505.456 kb on - strand, within MPMX20_02377at 2505.464 kb on + strand, within MPMX20_02377at 2505.510 kb on + strand, within MPMX20_02377at 2505.529 kb on + strand, within MPMX20_02377at 2505.529 kb on + strand, within MPMX20_02377at 2505.529 kb on + strand, within MPMX20_02377at 2505.547 kb on - strand, within MPMX20_02377

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,502,737 + MPMX20_02374 0.30 +0.3
2,502,745 - MPMX20_02374 0.31 -0.4
2,502,782 - MPMX20_02374 0.34 +0.3
2,502,823 + MPMX20_02374 0.37 -0.9
2,502,902 + MPMX20_02374 0.44 -0.9
2,502,902 + MPMX20_02374 0.44 +1.9
2,502,902 + MPMX20_02374 0.44 -1.0
2,502,912 - MPMX20_02374 0.45 -0.8
2,503,016 + MPMX20_02374 0.54 +1.3
2,503,022 - MPMX20_02374 0.54 -0.3
2,503,031 + MPMX20_02374 0.55 +0.6
2,503,039 - MPMX20_02374 0.55 +0.1
2,503,039 - MPMX20_02374 0.55 +0.1
2,503,039 - MPMX20_02374 0.55 +2.5
2,503,039 - MPMX20_02374 0.55 +1.9
2,503,041 + MPMX20_02374 0.56 -2.2
2,503,044 - MPMX20_02374 0.56 -0.1
2,503,044 - MPMX20_02374 0.56 -0.7
2,503,061 + MPMX20_02374 0.57 -0.3
2,503,061 + MPMX20_02374 0.57 +0.2
2,503,069 - MPMX20_02374 0.58 -1.9
2,503,104 + MPMX20_02374 0.61 -0.8
2,503,121 + MPMX20_02374 0.62 -0.6
2,503,124 - MPMX20_02374 0.63 -1.4
2,503,126 - MPMX20_02374 0.63 -0.9
2,503,128 + MPMX20_02374 0.63 +0.0
2,503,128 + MPMX20_02374 0.63 +0.0
2,503,138 + MPMX20_02374 0.64 -0.1
2,503,192 - MPMX20_02374 0.68 +0.3
2,503,273 + MPMX20_02374 0.75 -0.6
2,503,328 + MPMX20_02374 0.80 -0.1
2,503,369 + MPMX20_02374 0.83 -0.4
2,503,384 - MPMX20_02374 0.85 +0.9
2,503,411 - MPMX20_02374 0.87 -1.1
2,503,413 + MPMX20_02374 0.87 +2.3
2,503,421 - MPMX20_02374 0.88 -0.4
2,503,476 - +0.3
2,503,521 + -0.8
2,503,521 + -1.0
2,503,576 + -2.3
2,503,576 + -1.3
2,503,584 - -0.4
2,503,610 + +1.0
2,503,634 - -0.9
2,503,634 - -1.2
2,503,640 + +1.2
2,503,676 - -1.0
2,503,676 - -1.3
2,503,684 - -1.4
2,503,708 + +0.0
2,503,713 + -0.4
2,503,722 - -1.3
2,503,766 - +0.1
2,503,774 + +0.8
2,503,774 - +1.3
2,503,824 + MPMX20_02375 0.11 -1.6
2,503,834 + MPMX20_02375 0.13 +0.1
2,503,834 + MPMX20_02375 0.13 -0.8
2,503,834 + MPMX20_02375 0.13 -1.4
2,503,834 + MPMX20_02375 0.13 -2.0
2,503,834 + MPMX20_02375 0.13 -1.4
2,503,834 + MPMX20_02375 0.13 -0.3
2,503,842 - MPMX20_02375 0.14 -0.4
2,503,842 - MPMX20_02375 0.14 -0.1
2,503,874 - MPMX20_02375 0.18 -0.8
2,503,874 - MPMX20_02375 0.18 -1.7
2,503,892 - MPMX20_02375 0.20 +0.6
2,503,920 + MPMX20_02375 0.23 -1.2
2,503,983 - MPMX20_02375 0.31 +0.4
2,504,022 + MPMX20_02375 0.36 -2.1
2,504,030 - MPMX20_02375 0.37 -0.7
2,504,118 - MPMX20_02375 0.47 -1.0
2,504,123 - MPMX20_02375 0.48 +1.2
2,504,123 - MPMX20_02375 0.48 +0.9
2,504,258 + MPMX20_02375 0.64 -0.8
2,504,323 - MPMX20_02375 0.72 -0.7
2,504,350 + MPMX20_02375 0.76 +0.9
2,504,356 - MPMX20_02375 0.76 +0.9
2,504,369 - MPMX20_02375 0.78 -0.4
2,504,485 + +1.3
2,504,485 + +0.9
2,504,493 - +0.3
2,504,493 - -0.9
2,504,529 + -0.6
2,504,646 + -0.8
2,504,691 + MPMX20_02376 0.15 -0.5
2,504,731 + MPMX20_02376 0.21 -2.2
2,504,739 - MPMX20_02376 0.22 -1.1
2,504,742 - MPMX20_02376 0.23 -1.5
2,504,750 + MPMX20_02376 0.24 -0.6
2,504,753 - MPMX20_02376 0.25 -2.2
2,504,758 - MPMX20_02376 0.25 -2.3
2,504,828 + MPMX20_02376 0.36 +1.3
2,504,941 + MPMX20_02376 0.53 +0.1
2,504,941 + MPMX20_02376 0.53 -2.6
2,504,941 + MPMX20_02376 0.53 -1.4
2,504,950 - MPMX20_02376 0.55 +0.3
2,504,951 - MPMX20_02376 0.55 -1.2
2,504,977 + MPMX20_02376 0.59 -1.0
2,504,985 - MPMX20_02376 0.60 +0.1
2,505,042 - MPMX20_02376 0.69 -2.2
2,505,050 - MPMX20_02376 0.70 -0.3
2,505,101 - MPMX20_02376 0.78 -0.1
2,505,104 + MPMX20_02376 0.78 -2.5
2,505,123 + MPMX20_02376 0.81 -1.6
2,505,190 + -1.2
2,505,229 + -1.2
2,505,241 + -0.6
2,505,377 - MPMX20_02377 0.16 -0.9
2,505,436 + MPMX20_02377 0.22 -0.8
2,505,436 - MPMX20_02377 0.22 +0.6
2,505,444 - MPMX20_02377 0.23 -0.4
2,505,456 - MPMX20_02377 0.25 -0.4
2,505,464 + MPMX20_02377 0.26 -1.0
2,505,510 + MPMX20_02377 0.31 -0.7
2,505,529 + MPMX20_02377 0.33 -1.0
2,505,529 + MPMX20_02377 0.33 -2.6
2,505,529 + MPMX20_02377 0.33 -1.0
2,505,547 - MPMX20_02377 0.35 -1.9

Or see this region's nucleotide sequence