Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02270

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02269 and MPMX20_02270 overlap by 19 nucleotidesMPMX20_02270 and MPMX20_02271 are separated by 62 nucleotidesMPMX20_02271 and MPMX20_02272 overlap by 1 nucleotides MPMX20_02269: MPMX20_02269 - Succinate semialdehyde dehydrogenase [NAD(P)+] Sad, at 2,379,352 to 2,380,740 _02269 MPMX20_02270: MPMX20_02270 - Methyl-accepting chemotaxis protein I, at 2,380,722 to 2,382,446 _02270 MPMX20_02271: MPMX20_02271 - Glutaminase 2, at 2,382,509 to 2,383,435 _02271 MPMX20_02272: MPMX20_02272 - hypothetical protein, at 2,383,435 to 2,383,791 _02272 Position (kb) 2380 2381 2382 2383Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 2379.734 kb on + strand, within MPMX20_02269at 2379.773 kb on + strand, within MPMX20_02269at 2379.781 kb on - strand, within MPMX20_02269at 2379.781 kb on - strand, within MPMX20_02269at 2379.816 kb on - strand, within MPMX20_02269at 2379.825 kb on + strand, within MPMX20_02269at 2379.832 kb on - strand, within MPMX20_02269at 2379.833 kb on - strand, within MPMX20_02269at 2379.833 kb on - strand, within MPMX20_02269at 2379.833 kb on - strand, within MPMX20_02269at 2379.841 kb on + strand, within MPMX20_02269at 2379.854 kb on + strand, within MPMX20_02269at 2379.873 kb on + strand, within MPMX20_02269at 2379.904 kb on + strand, within MPMX20_02269at 2379.912 kb on - strand, within MPMX20_02269at 2380.020 kb on + strand, within MPMX20_02269at 2380.061 kb on + strand, within MPMX20_02269at 2380.061 kb on + strand, within MPMX20_02269at 2380.061 kb on + strand, within MPMX20_02269at 2380.061 kb on + strand, within MPMX20_02269at 2380.069 kb on - strand, within MPMX20_02269at 2380.069 kb on - strand, within MPMX20_02269at 2380.101 kb on - strand, within MPMX20_02269at 2380.130 kb on - strand, within MPMX20_02269at 2380.149 kb on + strand, within MPMX20_02269at 2380.149 kb on + strand, within MPMX20_02269at 2380.157 kb on - strand, within MPMX20_02269at 2380.157 kb on - strand, within MPMX20_02269at 2380.185 kb on + strand, within MPMX20_02269at 2380.209 kb on + strand, within MPMX20_02269at 2380.236 kb on + strand, within MPMX20_02269at 2380.286 kb on + strand, within MPMX20_02269at 2380.286 kb on + strand, within MPMX20_02269at 2380.361 kb on - strand, within MPMX20_02269at 2380.381 kb on + strand, within MPMX20_02269at 2380.388 kb on + strand, within MPMX20_02269at 2380.388 kb on + strand, within MPMX20_02269at 2380.389 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.396 kb on - strand, within MPMX20_02269at 2380.410 kb on + strand, within MPMX20_02269at 2380.457 kb on - strand, within MPMX20_02269at 2380.528 kb on - strand, within MPMX20_02269at 2380.608 kb on - strandat 2380.639 kb on + strandat 2380.709 kb on - strandat 2380.760 kb on - strandat 2380.892 kb on + strandat 2380.894 kb on + strandat 2380.895 kb on + strand, within MPMX20_02270at 2380.902 kb on - strand, within MPMX20_02270at 2380.917 kb on - strand, within MPMX20_02270at 2380.917 kb on - strand, within MPMX20_02270at 2380.959 kb on - strand, within MPMX20_02270at 2380.961 kb on + strand, within MPMX20_02270at 2380.967 kb on - strand, within MPMX20_02270at 2380.994 kb on + strand, within MPMX20_02270at 2381.017 kb on - strand, within MPMX20_02270at 2381.056 kb on - strand, within MPMX20_02270at 2381.058 kb on + strand, within MPMX20_02270at 2381.148 kb on - strand, within MPMX20_02270at 2381.183 kb on - strand, within MPMX20_02270at 2381.204 kb on + strand, within MPMX20_02270at 2381.204 kb on + strand, within MPMX20_02270at 2381.204 kb on + strand, within MPMX20_02270at 2381.212 kb on - strand, within MPMX20_02270at 2381.306 kb on + strand, within MPMX20_02270at 2381.520 kb on - strand, within MPMX20_02270at 2381.599 kb on - strand, within MPMX20_02270at 2381.609 kb on - strand, within MPMX20_02270at 2381.646 kb on - strand, within MPMX20_02270at 2381.660 kb on - strand, within MPMX20_02270at 2381.688 kb on + strand, within MPMX20_02270at 2381.746 kb on - strand, within MPMX20_02270at 2381.749 kb on + strand, within MPMX20_02270at 2381.837 kb on + strand, within MPMX20_02270at 2381.840 kb on + strand, within MPMX20_02270at 2381.840 kb on + strand, within MPMX20_02270at 2381.866 kb on + strand, within MPMX20_02270at 2381.866 kb on + strand, within MPMX20_02270at 2381.920 kb on - strand, within MPMX20_02270at 2381.923 kb on - strand, within MPMX20_02270at 2381.995 kb on + strand, within MPMX20_02270at 2382.016 kb on - strand, within MPMX20_02270at 2382.172 kb on - strand, within MPMX20_02270at 2382.187 kb on + strand, within MPMX20_02270at 2382.195 kb on - strand, within MPMX20_02270at 2382.280 kb on + strandat 2382.356 kb on + strandat 2382.358 kb on + strandat 2382.358 kb on + strandat 2382.376 kb on + strandat 2382.376 kb on + strandat 2382.376 kb on + strandat 2382.384 kb on - strandat 2382.451 kb on + strandat 2382.453 kb on + strandat 2382.459 kb on + strandat 2382.460 kb on - strandat 2382.461 kb on - strandat 2382.465 kb on + strandat 2382.471 kb on - strandat 2382.471 kb on - strandat 2382.489 kb on - strandat 2382.505 kb on + strandat 2382.515 kb on - strandat 2382.596 kb on + strandat 2382.608 kb on + strand, within MPMX20_02271at 2382.616 kb on - strand, within MPMX20_02271at 2382.616 kb on - strand, within MPMX20_02271at 2382.621 kb on + strand, within MPMX20_02271at 2382.723 kb on + strand, within MPMX20_02271at 2382.727 kb on + strand, within MPMX20_02271at 2382.727 kb on + strand, within MPMX20_02271at 2382.727 kb on + strand, within MPMX20_02271at 2382.727 kb on + strand, within MPMX20_02271at 2382.727 kb on + strand, within MPMX20_02271at 2382.731 kb on - strand, within MPMX20_02271at 2382.745 kb on + strand, within MPMX20_02271at 2382.796 kb on + strand, within MPMX20_02271at 2382.796 kb on + strand, within MPMX20_02271at 2382.805 kb on - strand, within MPMX20_02271at 2382.832 kb on + strand, within MPMX20_02271at 2382.832 kb on + strand, within MPMX20_02271at 2382.839 kb on - strand, within MPMX20_02271at 2382.839 kb on - strand, within MPMX20_02271at 2382.840 kb on - strand, within MPMX20_02271at 2382.906 kb on + strand, within MPMX20_02271at 2382.910 kb on + strand, within MPMX20_02271at 2382.922 kb on + strand, within MPMX20_02271at 2382.940 kb on + strand, within MPMX20_02271at 2382.990 kb on + strand, within MPMX20_02271at 2383.021 kb on + strand, within MPMX20_02271at 2383.113 kb on + strand, within MPMX20_02271at 2383.113 kb on + strand, within MPMX20_02271at 2383.121 kb on - strand, within MPMX20_02271at 2383.123 kb on + strand, within MPMX20_02271at 2383.148 kb on + strand, within MPMX20_02271at 2383.148 kb on + strand, within MPMX20_02271at 2383.314 kb on - strand, within MPMX20_02271at 2383.347 kb on + strandat 2383.412 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,379,734 + MPMX20_02269 0.28 +1.3
2,379,773 + MPMX20_02269 0.30 -1.1
2,379,781 - MPMX20_02269 0.31 +0.0
2,379,781 - MPMX20_02269 0.31 -1.6
2,379,816 - MPMX20_02269 0.33 +1.2
2,379,825 + MPMX20_02269 0.34 -0.3
2,379,832 - MPMX20_02269 0.35 -1.9
2,379,833 - MPMX20_02269 0.35 +0.5
2,379,833 - MPMX20_02269 0.35 +1.3
2,379,833 - MPMX20_02269 0.35 -0.6
2,379,841 + MPMX20_02269 0.35 -0.3
2,379,854 + MPMX20_02269 0.36 -1.5
2,379,873 + MPMX20_02269 0.38 -1.2
2,379,904 + MPMX20_02269 0.40 -0.9
2,379,912 - MPMX20_02269 0.40 +1.9
2,380,020 + MPMX20_02269 0.48 +1.3
2,380,061 + MPMX20_02269 0.51 -0.6
2,380,061 + MPMX20_02269 0.51 -0.7
2,380,061 + MPMX20_02269 0.51 -1.5
2,380,061 + MPMX20_02269 0.51 +0.9
2,380,069 - MPMX20_02269 0.52 -1.2
2,380,069 - MPMX20_02269 0.52 +1.3
2,380,101 - MPMX20_02269 0.54 -0.9
2,380,130 - MPMX20_02269 0.56 -2.0
2,380,149 + MPMX20_02269 0.57 -1.8
2,380,149 + MPMX20_02269 0.57 +0.3
2,380,157 - MPMX20_02269 0.58 +2.5
2,380,157 - MPMX20_02269 0.58 +6.1
2,380,185 + MPMX20_02269 0.60 -0.7
2,380,209 + MPMX20_02269 0.62 -0.2
2,380,236 + MPMX20_02269 0.64 -1.5
2,380,286 + MPMX20_02269 0.67 +0.9
2,380,286 + MPMX20_02269 0.67 -0.3
2,380,361 - MPMX20_02269 0.73 -2.0
2,380,381 + MPMX20_02269 0.74 -1.3
2,380,388 + MPMX20_02269 0.75 -1.0
2,380,388 + MPMX20_02269 0.75 -0.6
2,380,389 - MPMX20_02269 0.75 -1.4
2,380,396 - MPMX20_02269 0.75 +0.1
2,380,396 - MPMX20_02269 0.75 +2.9
2,380,396 - MPMX20_02269 0.75 -2.3
2,380,396 - MPMX20_02269 0.75 +0.9
2,380,396 - MPMX20_02269 0.75 +1.4
2,380,410 + MPMX20_02269 0.76 +0.7
2,380,457 - MPMX20_02269 0.80 -1.6
2,380,528 - MPMX20_02269 0.85 -0.1
2,380,608 - -0.8
2,380,639 + +0.9
2,380,709 - -2.1
2,380,760 - -0.8
2,380,892 + -1.2
2,380,894 + +1.3
2,380,895 + MPMX20_02270 0.10 -0.9
2,380,902 - MPMX20_02270 0.10 +0.7
2,380,917 - MPMX20_02270 0.11 -2.1
2,380,917 - MPMX20_02270 0.11 +1.3
2,380,959 - MPMX20_02270 0.14 -0.8
2,380,961 + MPMX20_02270 0.14 -0.3
2,380,967 - MPMX20_02270 0.14 +0.9
2,380,994 + MPMX20_02270 0.16 -2.3
2,381,017 - MPMX20_02270 0.17 -1.4
2,381,056 - MPMX20_02270 0.19 -0.1
2,381,058 + MPMX20_02270 0.19 +0.6
2,381,148 - MPMX20_02270 0.25 -1.2
2,381,183 - MPMX20_02270 0.27 +0.9
2,381,204 + MPMX20_02270 0.28 -0.9
2,381,204 + MPMX20_02270 0.28 -0.9
2,381,204 + MPMX20_02270 0.28 -1.1
2,381,212 - MPMX20_02270 0.28 -1.4
2,381,306 + MPMX20_02270 0.34 -1.4
2,381,520 - MPMX20_02270 0.46 -1.0
2,381,599 - MPMX20_02270 0.51 +1.3
2,381,609 - MPMX20_02270 0.51 +0.6
2,381,646 - MPMX20_02270 0.54 -1.0
2,381,660 - MPMX20_02270 0.54 -0.7
2,381,688 + MPMX20_02270 0.56 -0.6
2,381,746 - MPMX20_02270 0.59 -1.4
2,381,749 + MPMX20_02270 0.60 -0.3
2,381,837 + MPMX20_02270 0.65 +0.9
2,381,840 + MPMX20_02270 0.65 -1.8
2,381,840 + MPMX20_02270 0.65 -0.5
2,381,866 + MPMX20_02270 0.66 -1.7
2,381,866 + MPMX20_02270 0.66 +1.0
2,381,920 - MPMX20_02270 0.69 +0.6
2,381,923 - MPMX20_02270 0.70 -0.7
2,381,995 + MPMX20_02270 0.74 +0.9
2,382,016 - MPMX20_02270 0.75 -1.4
2,382,172 - MPMX20_02270 0.84 -0.4
2,382,187 + MPMX20_02270 0.85 +0.1
2,382,195 - MPMX20_02270 0.85 +0.1
2,382,280 + +2.9
2,382,356 + +0.0
2,382,358 + -2.9
2,382,358 + +0.0
2,382,376 + -1.0
2,382,376 + -0.8
2,382,376 + -0.3
2,382,384 - -2.5
2,382,451 + -0.2
2,382,453 + -0.5
2,382,459 + -1.1
2,382,460 - -0.8
2,382,461 - -0.1
2,382,465 + +0.9
2,382,471 - +0.4
2,382,471 - -0.8
2,382,489 - -0.2
2,382,505 + -0.9
2,382,515 - -0.5
2,382,596 + +0.0
2,382,608 + MPMX20_02271 0.11 -2.1
2,382,616 - MPMX20_02271 0.12 -1.1
2,382,616 - MPMX20_02271 0.12 -0.6
2,382,621 + MPMX20_02271 0.12 +0.7
2,382,723 + MPMX20_02271 0.23 -1.1
2,382,727 + MPMX20_02271 0.24 -0.3
2,382,727 + MPMX20_02271 0.24 -0.8
2,382,727 + MPMX20_02271 0.24 +0.1
2,382,727 + MPMX20_02271 0.24 +0.9
2,382,727 + MPMX20_02271 0.24 -1.2
2,382,731 - MPMX20_02271 0.24 -0.4
2,382,745 + MPMX20_02271 0.25 +0.9
2,382,796 + MPMX20_02271 0.31 -2.2
2,382,796 + MPMX20_02271 0.31 +0.6
2,382,805 - MPMX20_02271 0.32 +0.8
2,382,832 + MPMX20_02271 0.35 +0.3
2,382,832 + MPMX20_02271 0.35 -0.1
2,382,839 - MPMX20_02271 0.36 -0.9
2,382,839 - MPMX20_02271 0.36 -0.1
2,382,840 - MPMX20_02271 0.36 -0.8
2,382,906 + MPMX20_02271 0.43 -0.4
2,382,910 + MPMX20_02271 0.43 -0.7
2,382,922 + MPMX20_02271 0.45 -0.6
2,382,940 + MPMX20_02271 0.46 -0.1
2,382,990 + MPMX20_02271 0.52 -0.2
2,383,021 + MPMX20_02271 0.55 -1.0
2,383,113 + MPMX20_02271 0.65 +1.3
2,383,113 + MPMX20_02271 0.65 +0.3
2,383,121 - MPMX20_02271 0.66 -1.4
2,383,123 + MPMX20_02271 0.66 -1.0
2,383,148 + MPMX20_02271 0.69 -0.2
2,383,148 + MPMX20_02271 0.69 -1.7
2,383,314 - MPMX20_02271 0.87 -0.1
2,383,347 + +1.3
2,383,412 + +1.3

Or see this region's nucleotide sequence