Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02269 and MPMX20_02270 overlap by 19 nucleotides MPMX20_02270 and MPMX20_02271 are separated by 62 nucleotides MPMX20_02271 and MPMX20_02272 overlap by 1 nucleotides
MPMX20_02269: MPMX20_02269 - Succinate semialdehyde dehydrogenase [NAD(P)+] Sad, at 2,379,352 to 2,380,740
_02269
MPMX20_02270: MPMX20_02270 - Methyl-accepting chemotaxis protein I, at 2,380,722 to 2,382,446
_02270
MPMX20_02271: MPMX20_02271 - Glutaminase 2, at 2,382,509 to 2,383,435
_02271
MPMX20_02272: MPMX20_02272 - hypothetical protein, at 2,383,435 to 2,383,791
_02272
Position (kb)
2380
2381
2382
2383 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 2379.734 kb on + strand, within MPMX20_02269 at 2379.773 kb on + strand, within MPMX20_02269 at 2379.781 kb on - strand, within MPMX20_02269 at 2379.781 kb on - strand, within MPMX20_02269 at 2379.816 kb on - strand, within MPMX20_02269 at 2379.825 kb on + strand, within MPMX20_02269 at 2379.832 kb on - strand, within MPMX20_02269 at 2379.833 kb on - strand, within MPMX20_02269 at 2379.833 kb on - strand, within MPMX20_02269 at 2379.833 kb on - strand, within MPMX20_02269 at 2379.841 kb on + strand, within MPMX20_02269 at 2379.854 kb on + strand, within MPMX20_02269 at 2379.873 kb on + strand, within MPMX20_02269 at 2379.904 kb on + strand, within MPMX20_02269 at 2379.912 kb on - strand, within MPMX20_02269 at 2380.020 kb on + strand, within MPMX20_02269 at 2380.061 kb on + strand, within MPMX20_02269 at 2380.061 kb on + strand, within MPMX20_02269 at 2380.061 kb on + strand, within MPMX20_02269 at 2380.061 kb on + strand, within MPMX20_02269 at 2380.069 kb on - strand, within MPMX20_02269 at 2380.069 kb on - strand, within MPMX20_02269 at 2380.101 kb on - strand, within MPMX20_02269 at 2380.130 kb on - strand, within MPMX20_02269 at 2380.149 kb on + strand, within MPMX20_02269 at 2380.149 kb on + strand, within MPMX20_02269 at 2380.157 kb on - strand, within MPMX20_02269 at 2380.157 kb on - strand, within MPMX20_02269 at 2380.185 kb on + strand, within MPMX20_02269 at 2380.209 kb on + strand, within MPMX20_02269 at 2380.236 kb on + strand, within MPMX20_02269 at 2380.286 kb on + strand, within MPMX20_02269 at 2380.286 kb on + strand, within MPMX20_02269 at 2380.361 kb on - strand, within MPMX20_02269 at 2380.381 kb on + strand, within MPMX20_02269 at 2380.388 kb on + strand, within MPMX20_02269 at 2380.388 kb on + strand, within MPMX20_02269 at 2380.389 kb on - strand, within MPMX20_02269 at 2380.396 kb on - strand, within MPMX20_02269 at 2380.396 kb on - strand, within MPMX20_02269 at 2380.396 kb on - strand, within MPMX20_02269 at 2380.396 kb on - strand, within MPMX20_02269 at 2380.396 kb on - strand, within MPMX20_02269 at 2380.410 kb on + strand, within MPMX20_02269 at 2380.457 kb on - strand, within MPMX20_02269 at 2380.528 kb on - strand, within MPMX20_02269 at 2380.608 kb on - strand at 2380.639 kb on + strand at 2380.709 kb on - strand at 2380.760 kb on - strand at 2380.892 kb on + strand at 2380.894 kb on + strand at 2380.895 kb on + strand, within MPMX20_02270 at 2380.902 kb on - strand, within MPMX20_02270 at 2380.917 kb on - strand, within MPMX20_02270 at 2380.917 kb on - strand, within MPMX20_02270 at 2380.959 kb on - strand, within MPMX20_02270 at 2380.961 kb on + strand, within MPMX20_02270 at 2380.967 kb on - strand, within MPMX20_02270 at 2380.994 kb on + strand, within MPMX20_02270 at 2381.017 kb on - strand, within MPMX20_02270 at 2381.056 kb on - strand, within MPMX20_02270 at 2381.058 kb on + strand, within MPMX20_02270 at 2381.148 kb on - strand, within MPMX20_02270 at 2381.183 kb on - strand, within MPMX20_02270 at 2381.204 kb on + strand, within MPMX20_02270 at 2381.204 kb on + strand, within MPMX20_02270 at 2381.204 kb on + strand, within MPMX20_02270 at 2381.212 kb on - strand, within MPMX20_02270 at 2381.306 kb on + strand, within MPMX20_02270 at 2381.520 kb on - strand, within MPMX20_02270 at 2381.599 kb on - strand, within MPMX20_02270 at 2381.609 kb on - strand, within MPMX20_02270 at 2381.646 kb on - strand, within MPMX20_02270 at 2381.660 kb on - strand, within MPMX20_02270 at 2381.688 kb on + strand, within MPMX20_02270 at 2381.746 kb on - strand, within MPMX20_02270 at 2381.749 kb on + strand, within MPMX20_02270 at 2381.837 kb on + strand, within MPMX20_02270 at 2381.840 kb on + strand, within MPMX20_02270 at 2381.840 kb on + strand, within MPMX20_02270 at 2381.866 kb on + strand, within MPMX20_02270 at 2381.866 kb on + strand, within MPMX20_02270 at 2381.920 kb on - strand, within MPMX20_02270 at 2381.923 kb on - strand, within MPMX20_02270 at 2381.995 kb on + strand, within MPMX20_02270 at 2382.016 kb on - strand, within MPMX20_02270 at 2382.172 kb on - strand, within MPMX20_02270 at 2382.187 kb on + strand, within MPMX20_02270 at 2382.195 kb on - strand, within MPMX20_02270 at 2382.280 kb on + strand at 2382.356 kb on + strand at 2382.358 kb on + strand at 2382.358 kb on + strand at 2382.376 kb on + strand at 2382.376 kb on + strand at 2382.376 kb on + strand at 2382.384 kb on - strand at 2382.451 kb on + strand at 2382.453 kb on + strand at 2382.459 kb on + strand at 2382.460 kb on - strand at 2382.461 kb on - strand at 2382.465 kb on + strand at 2382.471 kb on - strand at 2382.471 kb on - strand at 2382.489 kb on - strand at 2382.505 kb on + strand at 2382.515 kb on - strand at 2382.596 kb on + strand at 2382.608 kb on + strand, within MPMX20_02271 at 2382.616 kb on - strand, within MPMX20_02271 at 2382.616 kb on - strand, within MPMX20_02271 at 2382.621 kb on + strand, within MPMX20_02271 at 2382.723 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.731 kb on - strand, within MPMX20_02271 at 2382.745 kb on + strand, within MPMX20_02271 at 2382.796 kb on + strand, within MPMX20_02271 at 2382.796 kb on + strand, within MPMX20_02271 at 2382.805 kb on - strand, within MPMX20_02271 at 2382.832 kb on + strand, within MPMX20_02271 at 2382.832 kb on + strand, within MPMX20_02271 at 2382.839 kb on - strand, within MPMX20_02271 at 2382.839 kb on - strand, within MPMX20_02271 at 2382.840 kb on - strand, within MPMX20_02271 at 2382.906 kb on + strand, within MPMX20_02271 at 2382.910 kb on + strand, within MPMX20_02271 at 2382.922 kb on + strand, within MPMX20_02271 at 2382.940 kb on + strand, within MPMX20_02271 at 2382.990 kb on + strand, within MPMX20_02271 at 2383.021 kb on + strand, within MPMX20_02271 at 2383.113 kb on + strand, within MPMX20_02271 at 2383.113 kb on + strand, within MPMX20_02271 at 2383.121 kb on - strand, within MPMX20_02271 at 2383.123 kb on + strand, within MPMX20_02271 at 2383.148 kb on + strand, within MPMX20_02271 at 2383.148 kb on + strand, within MPMX20_02271 at 2383.314 kb on - strand, within MPMX20_02271 at 2383.347 kb on + strand at 2383.412 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,379,734 + MPMX20_02269 0.28 +1.3 2,379,773 + MPMX20_02269 0.30 -1.1 2,379,781 - MPMX20_02269 0.31 +0.0 2,379,781 - MPMX20_02269 0.31 -1.6 2,379,816 - MPMX20_02269 0.33 +1.2 2,379,825 + MPMX20_02269 0.34 -0.3 2,379,832 - MPMX20_02269 0.35 -1.9 2,379,833 - MPMX20_02269 0.35 +0.5 2,379,833 - MPMX20_02269 0.35 +1.3 2,379,833 - MPMX20_02269 0.35 -0.6 2,379,841 + MPMX20_02269 0.35 -0.3 2,379,854 + MPMX20_02269 0.36 -1.5 2,379,873 + MPMX20_02269 0.38 -1.2 2,379,904 + MPMX20_02269 0.40 -0.9 2,379,912 - MPMX20_02269 0.40 +1.9 2,380,020 + MPMX20_02269 0.48 +1.3 2,380,061 + MPMX20_02269 0.51 -0.6 2,380,061 + MPMX20_02269 0.51 -0.7 2,380,061 + MPMX20_02269 0.51 -1.5 2,380,061 + MPMX20_02269 0.51 +0.9 2,380,069 - MPMX20_02269 0.52 -1.2 2,380,069 - MPMX20_02269 0.52 +1.3 2,380,101 - MPMX20_02269 0.54 -0.9 2,380,130 - MPMX20_02269 0.56 -2.0 2,380,149 + MPMX20_02269 0.57 -1.8 2,380,149 + MPMX20_02269 0.57 +0.3 2,380,157 - MPMX20_02269 0.58 +2.5 2,380,157 - MPMX20_02269 0.58 +6.1 2,380,185 + MPMX20_02269 0.60 -0.7 2,380,209 + MPMX20_02269 0.62 -0.2 2,380,236 + MPMX20_02269 0.64 -1.5 2,380,286 + MPMX20_02269 0.67 +0.9 2,380,286 + MPMX20_02269 0.67 -0.3 2,380,361 - MPMX20_02269 0.73 -2.0 2,380,381 + MPMX20_02269 0.74 -1.3 2,380,388 + MPMX20_02269 0.75 -1.0 2,380,388 + MPMX20_02269 0.75 -0.6 2,380,389 - MPMX20_02269 0.75 -1.4 2,380,396 - MPMX20_02269 0.75 +0.1 2,380,396 - MPMX20_02269 0.75 +2.9 2,380,396 - MPMX20_02269 0.75 -2.3 2,380,396 - MPMX20_02269 0.75 +0.9 2,380,396 - MPMX20_02269 0.75 +1.4 2,380,410 + MPMX20_02269 0.76 +0.7 2,380,457 - MPMX20_02269 0.80 -1.6 2,380,528 - MPMX20_02269 0.85 -0.1 2,380,608 - -0.8 2,380,639 + +0.9 2,380,709 - -2.1 2,380,760 - -0.8 2,380,892 + -1.2 2,380,894 + +1.3 2,380,895 + MPMX20_02270 0.10 -0.9 2,380,902 - MPMX20_02270 0.10 +0.7 2,380,917 - MPMX20_02270 0.11 -2.1 2,380,917 - MPMX20_02270 0.11 +1.3 2,380,959 - MPMX20_02270 0.14 -0.8 2,380,961 + MPMX20_02270 0.14 -0.3 2,380,967 - MPMX20_02270 0.14 +0.9 2,380,994 + MPMX20_02270 0.16 -2.3 2,381,017 - MPMX20_02270 0.17 -1.4 2,381,056 - MPMX20_02270 0.19 -0.1 2,381,058 + MPMX20_02270 0.19 +0.6 2,381,148 - MPMX20_02270 0.25 -1.2 2,381,183 - MPMX20_02270 0.27 +0.9 2,381,204 + MPMX20_02270 0.28 -0.9 2,381,204 + MPMX20_02270 0.28 -0.9 2,381,204 + MPMX20_02270 0.28 -1.1 2,381,212 - MPMX20_02270 0.28 -1.4 2,381,306 + MPMX20_02270 0.34 -1.4 2,381,520 - MPMX20_02270 0.46 -1.0 2,381,599 - MPMX20_02270 0.51 +1.3 2,381,609 - MPMX20_02270 0.51 +0.6 2,381,646 - MPMX20_02270 0.54 -1.0 2,381,660 - MPMX20_02270 0.54 -0.7 2,381,688 + MPMX20_02270 0.56 -0.6 2,381,746 - MPMX20_02270 0.59 -1.4 2,381,749 + MPMX20_02270 0.60 -0.3 2,381,837 + MPMX20_02270 0.65 +0.9 2,381,840 + MPMX20_02270 0.65 -1.8 2,381,840 + MPMX20_02270 0.65 -0.5 2,381,866 + MPMX20_02270 0.66 -1.7 2,381,866 + MPMX20_02270 0.66 +1.0 2,381,920 - MPMX20_02270 0.69 +0.6 2,381,923 - MPMX20_02270 0.70 -0.7 2,381,995 + MPMX20_02270 0.74 +0.9 2,382,016 - MPMX20_02270 0.75 -1.4 2,382,172 - MPMX20_02270 0.84 -0.4 2,382,187 + MPMX20_02270 0.85 +0.1 2,382,195 - MPMX20_02270 0.85 +0.1 2,382,280 + +2.9 2,382,356 + +0.0 2,382,358 + -2.9 2,382,358 + +0.0 2,382,376 + -1.0 2,382,376 + -0.8 2,382,376 + -0.3 2,382,384 - -2.5 2,382,451 + -0.2 2,382,453 + -0.5 2,382,459 + -1.1 2,382,460 - -0.8 2,382,461 - -0.1 2,382,465 + +0.9 2,382,471 - +0.4 2,382,471 - -0.8 2,382,489 - -0.2 2,382,505 + -0.9 2,382,515 - -0.5 2,382,596 + +0.0 2,382,608 + MPMX20_02271 0.11 -2.1 2,382,616 - MPMX20_02271 0.12 -1.1 2,382,616 - MPMX20_02271 0.12 -0.6 2,382,621 + MPMX20_02271 0.12 +0.7 2,382,723 + MPMX20_02271 0.23 -1.1 2,382,727 + MPMX20_02271 0.24 -0.3 2,382,727 + MPMX20_02271 0.24 -0.8 2,382,727 + MPMX20_02271 0.24 +0.1 2,382,727 + MPMX20_02271 0.24 +0.9 2,382,727 + MPMX20_02271 0.24 -1.2 2,382,731 - MPMX20_02271 0.24 -0.4 2,382,745 + MPMX20_02271 0.25 +0.9 2,382,796 + MPMX20_02271 0.31 -2.2 2,382,796 + MPMX20_02271 0.31 +0.6 2,382,805 - MPMX20_02271 0.32 +0.8 2,382,832 + MPMX20_02271 0.35 +0.3 2,382,832 + MPMX20_02271 0.35 -0.1 2,382,839 - MPMX20_02271 0.36 -0.9 2,382,839 - MPMX20_02271 0.36 -0.1 2,382,840 - MPMX20_02271 0.36 -0.8 2,382,906 + MPMX20_02271 0.43 -0.4 2,382,910 + MPMX20_02271 0.43 -0.7 2,382,922 + MPMX20_02271 0.45 -0.6 2,382,940 + MPMX20_02271 0.46 -0.1 2,382,990 + MPMX20_02271 0.52 -0.2 2,383,021 + MPMX20_02271 0.55 -1.0 2,383,113 + MPMX20_02271 0.65 +1.3 2,383,113 + MPMX20_02271 0.65 +0.3 2,383,121 - MPMX20_02271 0.66 -1.4 2,383,123 + MPMX20_02271 0.66 -1.0 2,383,148 + MPMX20_02271 0.69 -0.2 2,383,148 + MPMX20_02271 0.69 -1.7 2,383,314 - MPMX20_02271 0.87 -0.1 2,383,347 + +1.3 2,383,412 + +1.3
Or see this region's nucleotide sequence