Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01955 and MPMX20_01956 overlap by 8 nucleotides MPMX20_01956 and MPMX20_01957 are separated by 28 nucleotides MPMX20_01957 and MPMX20_01958 are separated by 108 nucleotides MPMX20_01958 and MPMX20_01959 overlap by 20 nucleotides MPMX20_01959 and MPMX20_01960 overlap by 17 nucleotides
MPMX20_01955: MPMX20_01955 - Methionine import ATP-binding protein MetN, at 2,051,202 to 2,052,224
_01955
MPMX20_01956: MPMX20_01956 - Methionine import system permease protein MetP, at 2,052,217 to 2,052,885
_01956
MPMX20_01957: MPMX20_01957 - Methionine-binding lipoprotein MetQ, at 2,052,914 to 2,053,726
_01957
MPMX20_01958: MPMX20_01958 - Fumarase D, at 2,053,835 to 2,054,044
_01958
MPMX20_01959: MPMX20_01959 - putative glutamine ABC transporter permease protein GlnP, at 2,054,025 to 2,054,711
_01959
MPMX20_01960: MPMX20_01960 - Glutamate/aspartate import permease protein GltJ, at 2,054,695 to 2,055,441
_01960
Position (kb)
2052
2053
2054 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2051.965 kb on - strand, within MPMX20_01955 at 2052.008 kb on - strand, within MPMX20_01955 at 2052.017 kb on + strand, within MPMX20_01955 at 2052.025 kb on + strand, within MPMX20_01955 at 2052.033 kb on - strand, within MPMX20_01955 at 2052.033 kb on - strand, within MPMX20_01955 at 2052.033 kb on - strand, within MPMX20_01955 at 2052.033 kb on - strand, within MPMX20_01955 at 2052.125 kb on + strand at 2052.130 kb on + strand at 2052.156 kb on + strand at 2052.172 kb on + strand at 2052.238 kb on + strand at 2052.255 kb on + strand at 2052.282 kb on + strand at 2052.282 kb on + strand at 2052.290 kb on - strand, within MPMX20_01956 at 2052.319 kb on - strand, within MPMX20_01956 at 2052.329 kb on + strand, within MPMX20_01956 at 2052.329 kb on + strand, within MPMX20_01956 at 2052.353 kb on - strand, within MPMX20_01956 at 2052.353 kb on - strand, within MPMX20_01956 at 2052.353 kb on - strand, within MPMX20_01956 at 2052.461 kb on - strand, within MPMX20_01956 at 2052.482 kb on + strand, within MPMX20_01956 at 2052.532 kb on + strand, within MPMX20_01956 at 2052.601 kb on + strand, within MPMX20_01956 at 2052.626 kb on - strand, within MPMX20_01956 at 2052.634 kb on - strand, within MPMX20_01956 at 2052.654 kb on + strand, within MPMX20_01956 at 2052.662 kb on - strand, within MPMX20_01956 at 2052.667 kb on - strand, within MPMX20_01956 at 2052.669 kb on + strand, within MPMX20_01956 at 2052.669 kb on + strand, within MPMX20_01956 at 2052.677 kb on - strand, within MPMX20_01956 at 2052.720 kb on + strand, within MPMX20_01956 at 2052.791 kb on + strand, within MPMX20_01956 at 2052.815 kb on + strand, within MPMX20_01956 at 2052.838 kb on + strand at 2052.846 kb on - strand at 2052.846 kb on - strand at 2052.856 kb on + strand at 2052.856 kb on + strand at 2052.856 kb on + strand at 2052.856 kb on + strand at 2052.863 kb on - strand at 2052.864 kb on - strand at 2052.864 kb on - strand at 2052.864 kb on - strand at 2052.864 kb on - strand at 2052.876 kb on - strand at 2052.880 kb on + strand at 2052.942 kb on + strand at 2052.942 kb on + strand at 2052.947 kb on + strand at 2052.950 kb on - strand at 2052.964 kb on - strand at 2052.964 kb on - strand at 2052.982 kb on + strand at 2052.990 kb on + strand at 2053.033 kb on + strand, within MPMX20_01957 at 2053.033 kb on + strand, within MPMX20_01957 at 2053.033 kb on + strand, within MPMX20_01957 at 2053.033 kb on + strand, within MPMX20_01957 at 2053.054 kb on + strand, within MPMX20_01957 at 2053.065 kb on - strand, within MPMX20_01957 at 2053.089 kb on + strand, within MPMX20_01957 at 2053.099 kb on + strand, within MPMX20_01957 at 2053.099 kb on + strand, within MPMX20_01957 at 2053.099 kb on + strand, within MPMX20_01957 at 2053.099 kb on + strand, within MPMX20_01957 at 2053.107 kb on - strand, within MPMX20_01957 at 2053.107 kb on - strand, within MPMX20_01957 at 2053.107 kb on - strand, within MPMX20_01957 at 2053.107 kb on - strand, within MPMX20_01957 at 2053.112 kb on - strand, within MPMX20_01957 at 2053.114 kb on + strand, within MPMX20_01957 at 2053.151 kb on + strand, within MPMX20_01957 at 2053.157 kb on + strand, within MPMX20_01957 at 2053.203 kb on - strand, within MPMX20_01957 at 2053.317 kb on + strand, within MPMX20_01957 at 2053.334 kb on + strand, within MPMX20_01957 at 2053.435 kb on + strand, within MPMX20_01957 at 2053.447 kb on + strand, within MPMX20_01957 at 2053.561 kb on + strand, within MPMX20_01957 at 2053.594 kb on + strand, within MPMX20_01957 at 2053.594 kb on + strand, within MPMX20_01957 at 2053.594 kb on + strand, within MPMX20_01957 at 2053.619 kb on - strand, within MPMX20_01957 at 2053.645 kb on + strand at 2053.645 kb on + strand at 2053.645 kb on + strand at 2053.651 kb on - strand at 2053.668 kb on - strand at 2053.683 kb on - strand at 2053.683 kb on - strand at 2053.701 kb on + strand at 2053.819 kb on - strand at 2053.819 kb on - strand at 2053.965 kb on - strand, within MPMX20_01958 at 2054.031 kb on - strand at 2054.066 kb on + strand at 2054.066 kb on + strand at 2054.066 kb on + strand at 2054.066 kb on + strand at 2054.066 kb on + strand at 2054.074 kb on - strand at 2054.102 kb on - strand, within MPMX20_01959 at 2054.188 kb on - strand, within MPMX20_01959 at 2054.214 kb on - strand, within MPMX20_01959 at 2054.241 kb on + strand, within MPMX20_01959 at 2054.313 kb on - strand, within MPMX20_01959 at 2054.320 kb on + strand, within MPMX20_01959 at 2054.328 kb on - strand, within MPMX20_01959 at 2054.328 kb on - strand, within MPMX20_01959 at 2054.355 kb on + strand, within MPMX20_01959 at 2054.360 kb on + strand, within MPMX20_01959 at 2054.363 kb on - strand, within MPMX20_01959 at 2054.363 kb on - strand, within MPMX20_01959 at 2054.402 kb on - strand, within MPMX20_01959 at 2054.481 kb on + strand, within MPMX20_01959 at 2054.507 kb on - strand, within MPMX20_01959 at 2054.561 kb on - strand, within MPMX20_01959 at 2054.562 kb on + strand, within MPMX20_01959 at 2054.585 kb on + strand, within MPMX20_01959 at 2054.586 kb on + strand, within MPMX20_01959 at 2054.593 kb on - strand, within MPMX20_01959 at 2054.593 kb on - strand, within MPMX20_01959 at 2054.632 kb on + strand, within MPMX20_01959 at 2054.648 kb on - strand at 2054.656 kb on + strand at 2054.667 kb on - strand at 2054.693 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,051,965 - MPMX20_01955 0.75 +0.1 2,052,008 - MPMX20_01955 0.79 +2.3 2,052,017 + MPMX20_01955 0.80 -0.5 2,052,025 + MPMX20_01955 0.80 -0.1 2,052,033 - MPMX20_01955 0.81 -1.4 2,052,033 - MPMX20_01955 0.81 -0.3 2,052,033 - MPMX20_01955 0.81 -0.5 2,052,033 - MPMX20_01955 0.81 +2.8 2,052,125 + +0.6 2,052,130 + +0.6 2,052,156 + +0.9 2,052,172 + -0.8 2,052,238 + -1.5 2,052,255 + +3.9 2,052,282 + +0.3 2,052,282 + +0.1 2,052,290 - MPMX20_01956 0.11 -1.5 2,052,319 - MPMX20_01956 0.15 -0.7 2,052,329 + MPMX20_01956 0.17 -0.9 2,052,329 + MPMX20_01956 0.17 +0.1 2,052,353 - MPMX20_01956 0.20 +0.6 2,052,353 - MPMX20_01956 0.20 -1.1 2,052,353 - MPMX20_01956 0.20 -1.4 2,052,461 - MPMX20_01956 0.36 -1.8 2,052,482 + MPMX20_01956 0.40 -0.5 2,052,532 + MPMX20_01956 0.47 +0.8 2,052,601 + MPMX20_01956 0.57 -0.8 2,052,626 - MPMX20_01956 0.61 -0.7 2,052,634 - MPMX20_01956 0.62 -1.5 2,052,654 + MPMX20_01956 0.65 -1.9 2,052,662 - MPMX20_01956 0.67 -1.2 2,052,667 - MPMX20_01956 0.67 -1.2 2,052,669 + MPMX20_01956 0.68 +0.2 2,052,669 + MPMX20_01956 0.68 -0.2 2,052,677 - MPMX20_01956 0.69 -0.6 2,052,720 + MPMX20_01956 0.75 +0.8 2,052,791 + MPMX20_01956 0.86 -0.2 2,052,815 + MPMX20_01956 0.89 -1.5 2,052,838 + -0.2 2,052,846 - +1.5 2,052,846 - -1.3 2,052,856 + -1.7 2,052,856 + +0.2 2,052,856 + +0.2 2,052,856 + -0.5 2,052,863 - +0.7 2,052,864 - -0.4 2,052,864 - -0.5 2,052,864 - -0.3 2,052,864 - +0.3 2,052,876 - -2.5 2,052,880 + -1.2 2,052,942 + +0.1 2,052,942 + -2.4 2,052,947 + +0.1 2,052,950 - -0.3 2,052,964 - +0.9 2,052,964 - -0.2 2,052,982 + +2.9 2,052,990 + -0.2 2,053,033 + MPMX20_01957 0.15 -0.4 2,053,033 + MPMX20_01957 0.15 -1.9 2,053,033 + MPMX20_01957 0.15 -2.8 2,053,033 + MPMX20_01957 0.15 -0.2 2,053,054 + MPMX20_01957 0.17 -2.4 2,053,065 - MPMX20_01957 0.19 -1.2 2,053,089 + MPMX20_01957 0.22 -1.6 2,053,099 + MPMX20_01957 0.23 +0.1 2,053,099 + MPMX20_01957 0.23 -1.1 2,053,099 + MPMX20_01957 0.23 +0.3 2,053,099 + MPMX20_01957 0.23 -1.1 2,053,107 - MPMX20_01957 0.24 -0.3 2,053,107 - MPMX20_01957 0.24 +0.3 2,053,107 - MPMX20_01957 0.24 -0.7 2,053,107 - MPMX20_01957 0.24 -0.6 2,053,112 - MPMX20_01957 0.24 +0.9 2,053,114 + MPMX20_01957 0.25 +1.6 2,053,151 + MPMX20_01957 0.29 -0.6 2,053,157 + MPMX20_01957 0.30 -0.5 2,053,203 - MPMX20_01957 0.36 -1.7 2,053,317 + MPMX20_01957 0.50 -0.7 2,053,334 + MPMX20_01957 0.52 +0.5 2,053,435 + MPMX20_01957 0.64 +0.9 2,053,447 + MPMX20_01957 0.66 -0.7 2,053,561 + MPMX20_01957 0.80 -1.3 2,053,594 + MPMX20_01957 0.84 -1.0 2,053,594 + MPMX20_01957 0.84 -0.7 2,053,594 + MPMX20_01957 0.84 -1.5 2,053,619 - MPMX20_01957 0.87 -1.2 2,053,645 + +1.6 2,053,645 + -1.2 2,053,645 + -1.1 2,053,651 - +1.9 2,053,668 - -0.8 2,053,683 - +0.5 2,053,683 - -0.7 2,053,701 + +2.9 2,053,819 - -0.8 2,053,819 - -0.2 2,053,965 - MPMX20_01958 0.62 +0.3 2,054,031 - +1.3 2,054,066 + +0.4 2,054,066 + -0.3 2,054,066 + -1.5 2,054,066 + +0.4 2,054,066 + +1.1 2,054,074 - +0.3 2,054,102 - MPMX20_01959 0.11 -1.4 2,054,188 - MPMX20_01959 0.24 +0.8 2,054,214 - MPMX20_01959 0.28 +1.1 2,054,241 + MPMX20_01959 0.31 +0.1 2,054,313 - MPMX20_01959 0.42 +0.9 2,054,320 + MPMX20_01959 0.43 -2.1 2,054,328 - MPMX20_01959 0.44 +0.5 2,054,328 - MPMX20_01959 0.44 +0.3 2,054,355 + MPMX20_01959 0.48 -0.8 2,054,360 + MPMX20_01959 0.49 -0.1 2,054,363 - MPMX20_01959 0.49 -0.7 2,054,363 - MPMX20_01959 0.49 -0.5 2,054,402 - MPMX20_01959 0.55 -0.8 2,054,481 + MPMX20_01959 0.66 +0.2 2,054,507 - MPMX20_01959 0.70 -0.7 2,054,561 - MPMX20_01959 0.78 -0.4 2,054,562 + MPMX20_01959 0.78 +0.6 2,054,585 + MPMX20_01959 0.82 -0.4 2,054,586 + MPMX20_01959 0.82 -2.5 2,054,593 - MPMX20_01959 0.83 -0.9 2,054,593 - MPMX20_01959 0.83 -0.7 2,054,632 + MPMX20_01959 0.88 -2.2 2,054,648 - +0.1 2,054,656 + -1.2 2,054,667 - -1.0 2,054,693 + -0.3
Or see this region's nucleotide sequence