Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01919

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01918 and MPMX20_01919 are separated by 76 nucleotidesMPMX20_01919 and MPMX20_01920 are separated by 166 nucleotides MPMX20_01918: MPMX20_01918 - Hemin receptor, at 2,008,709 to 2,010,694 _01918 MPMX20_01919: MPMX20_01919 - putative protein YdiE, at 2,010,771 to 2,010,959 _01919 MPMX20_01920: MPMX20_01920 - Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive, at 2,011,126 to 2,012,172 _01920 Position (kb) 2010 2011Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2009.788 kb on + strand, within MPMX20_01918at 2009.788 kb on + strand, within MPMX20_01918at 2009.796 kb on - strand, within MPMX20_01918at 2009.836 kb on + strand, within MPMX20_01918at 2010.143 kb on - strand, within MPMX20_01918at 2010.156 kb on - strand, within MPMX20_01918at 2010.265 kb on - strand, within MPMX20_01918at 2010.278 kb on + strand, within MPMX20_01918at 2010.278 kb on + strand, within MPMX20_01918at 2010.286 kb on - strand, within MPMX20_01918at 2010.286 kb on - strand, within MPMX20_01918at 2010.292 kb on - strand, within MPMX20_01918at 2010.320 kb on - strand, within MPMX20_01918at 2010.327 kb on + strand, within MPMX20_01918at 2010.330 kb on - strand, within MPMX20_01918at 2010.342 kb on + strand, within MPMX20_01918at 2010.342 kb on + strand, within MPMX20_01918at 2010.414 kb on - strand, within MPMX20_01918at 2010.474 kb on - strand, within MPMX20_01918at 2010.474 kb on - strand, within MPMX20_01918at 2010.474 kb on - strand, within MPMX20_01918at 2010.556 kb on - strandat 2010.564 kb on - strandat 2010.649 kb on + strandat 2010.739 kb on + strandat 2010.836 kb on - strand, within MPMX20_01919at 2010.915 kb on - strand, within MPMX20_01919at 2010.921 kb on - strand, within MPMX20_01919at 2010.939 kb on + strand, within MPMX20_01919at 2011.053 kb on + strandat 2011.086 kb on + strandat 2011.110 kb on + strandat 2011.110 kb on + strandat 2011.118 kb on - strandat 2011.178 kb on - strandat 2011.179 kb on + strandat 2011.186 kb on + strandat 2011.199 kb on - strandat 2011.210 kb on - strandat 2011.210 kb on - strandat 2011.213 kb on + strandat 2011.213 kb on + strandat 2011.220 kb on + strandat 2011.228 kb on - strandat 2011.229 kb on - strandat 2011.260 kb on + strand, within MPMX20_01920at 2011.293 kb on + strand, within MPMX20_01920at 2011.343 kb on - strand, within MPMX20_01920at 2011.427 kb on - strand, within MPMX20_01920at 2011.444 kb on - strand, within MPMX20_01920at 2011.444 kb on - strand, within MPMX20_01920at 2011.532 kb on + strand, within MPMX20_01920at 2011.532 kb on + strand, within MPMX20_01920at 2011.584 kb on - strand, within MPMX20_01920at 2011.642 kb on + strand, within MPMX20_01920at 2011.644 kb on - strand, within MPMX20_01920at 2011.644 kb on - strand, within MPMX20_01920at 2011.644 kb on - strand, within MPMX20_01920at 2011.644 kb on - strand, within MPMX20_01920at 2011.649 kb on - strand, within MPMX20_01920at 2011.703 kb on - strand, within MPMX20_01920at 2011.715 kb on + strand, within MPMX20_01920at 2011.803 kb on + strand, within MPMX20_01920at 2011.810 kb on - strand, within MPMX20_01920at 2011.823 kb on - strand, within MPMX20_01920at 2011.834 kb on + strand, within MPMX20_01920at 2011.862 kb on + strand, within MPMX20_01920at 2011.951 kb on - strand, within MPMX20_01920

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,009,788 + MPMX20_01918 0.54 -0.7
2,009,788 + MPMX20_01918 0.54 -0.8
2,009,796 - MPMX20_01918 0.55 -1.0
2,009,836 + MPMX20_01918 0.57 -0.9
2,010,143 - MPMX20_01918 0.72 -1.3
2,010,156 - MPMX20_01918 0.73 -0.7
2,010,265 - MPMX20_01918 0.78 +0.8
2,010,278 + MPMX20_01918 0.79 +0.3
2,010,278 + MPMX20_01918 0.79 +2.9
2,010,286 - MPMX20_01918 0.79 +1.1
2,010,286 - MPMX20_01918 0.79 -0.4
2,010,292 - MPMX20_01918 0.80 -0.7
2,010,320 - MPMX20_01918 0.81 -0.8
2,010,327 + MPMX20_01918 0.81 -0.2
2,010,330 - MPMX20_01918 0.82 -0.1
2,010,342 + MPMX20_01918 0.82 -1.2
2,010,342 + MPMX20_01918 0.82 +0.8
2,010,414 - MPMX20_01918 0.86 -0.3
2,010,474 - MPMX20_01918 0.89 -1.1
2,010,474 - MPMX20_01918 0.89 -0.6
2,010,474 - MPMX20_01918 0.89 +0.6
2,010,556 - +0.9
2,010,564 - -1.5
2,010,649 + -1.0
2,010,739 + -0.6
2,010,836 - MPMX20_01919 0.34 -2.1
2,010,915 - MPMX20_01919 0.76 +0.3
2,010,921 - MPMX20_01919 0.79 +1.3
2,010,939 + MPMX20_01919 0.89 -1.5
2,011,053 + -0.9
2,011,086 + +2.9
2,011,110 + -2.2
2,011,110 + -1.5
2,011,118 - +0.1
2,011,178 - +0.5
2,011,179 + -1.2
2,011,186 + -1.5
2,011,199 - -1.5
2,011,210 - -0.9
2,011,210 - -1.7
2,011,213 + +1.1
2,011,213 + -0.7
2,011,220 + -2.3
2,011,228 - -0.6
2,011,229 - +1.3
2,011,260 + MPMX20_01920 0.13 +1.3
2,011,293 + MPMX20_01920 0.16 -0.9
2,011,343 - MPMX20_01920 0.21 +0.9
2,011,427 - MPMX20_01920 0.29 -2.4
2,011,444 - MPMX20_01920 0.30 +0.2
2,011,444 - MPMX20_01920 0.30 -2.1
2,011,532 + MPMX20_01920 0.39 +1.3
2,011,532 + MPMX20_01920 0.39 -1.7
2,011,584 - MPMX20_01920 0.44 -0.5
2,011,642 + MPMX20_01920 0.49 +0.6
2,011,644 - MPMX20_01920 0.49 -0.5
2,011,644 - MPMX20_01920 0.49 -1.5
2,011,644 - MPMX20_01920 0.49 -0.7
2,011,644 - MPMX20_01920 0.49 +0.7
2,011,649 - MPMX20_01920 0.50 -1.1
2,011,703 - MPMX20_01920 0.55 -1.8
2,011,715 + MPMX20_01920 0.56 +0.2
2,011,803 + MPMX20_01920 0.65 -0.2
2,011,810 - MPMX20_01920 0.65 +1.1
2,011,823 - MPMX20_01920 0.67 -0.8
2,011,834 + MPMX20_01920 0.68 +0.9
2,011,862 + MPMX20_01920 0.70 -0.5
2,011,951 - MPMX20_01920 0.79 -0.5

Or see this region's nucleotide sequence