Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01793

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01791 and MPMX20_01792 are separated by 60 nucleotidesMPMX20_01792 and MPMX20_01793 are separated by 244 nucleotidesMPMX20_01793 and MPMX20_01794 are separated by 79 nucleotides MPMX20_01791: MPMX20_01791 - hypothetical protein, at 1,882,521 to 1,883,060 _01791 MPMX20_01792: MPMX20_01792 - HTH-type transcriptional repressor ComR, at 1,883,121 to 1,883,756 _01792 MPMX20_01793: MPMX20_01793 - Multiple stress resistance protein BhsA, at 1,884,001 to 1,884,258 _01793 MPMX20_01794: MPMX20_01794 - putative L,D-transpeptidase YcfS, at 1,884,338 to 1,885,303 _01794 Position (kb) 1884 1885Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1883.016 kb on - strandat 1883.092 kb on + strandat 1883.143 kb on - strandat 1883.143 kb on - strandat 1883.143 kb on - strandat 1883.147 kb on + strandat 1883.162 kb on + strandat 1883.363 kb on + strand, within MPMX20_01792at 1883.363 kb on + strand, within MPMX20_01792at 1883.371 kb on - strand, within MPMX20_01792at 1883.371 kb on - strand, within MPMX20_01792at 1883.383 kb on - strand, within MPMX20_01792at 1883.389 kb on - strand, within MPMX20_01792at 1883.390 kb on - strand, within MPMX20_01792at 1883.407 kb on - strand, within MPMX20_01792at 1883.409 kb on + strand, within MPMX20_01792at 1883.452 kb on - strand, within MPMX20_01792at 1883.474 kb on + strand, within MPMX20_01792at 1883.531 kb on + strand, within MPMX20_01792at 1883.549 kb on - strand, within MPMX20_01792at 1883.549 kb on - strand, within MPMX20_01792at 1883.549 kb on - strand, within MPMX20_01792at 1883.549 kb on - strand, within MPMX20_01792at 1883.551 kb on + strand, within MPMX20_01792at 1883.551 kb on + strand, within MPMX20_01792at 1883.551 kb on + strand, within MPMX20_01792at 1883.551 kb on + strand, within MPMX20_01792at 1883.551 kb on + strand, within MPMX20_01792at 1883.551 kb on + strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.559 kb on - strand, within MPMX20_01792at 1883.675 kb on - strand, within MPMX20_01792at 1883.676 kb on - strand, within MPMX20_01792at 1883.687 kb on - strand, within MPMX20_01792at 1883.697 kb on + strandat 1883.779 kb on - strandat 1883.970 kb on + strandat 1884.028 kb on + strand, within MPMX20_01793at 1884.081 kb on + strand, within MPMX20_01793at 1884.097 kb on - strand, within MPMX20_01793at 1884.131 kb on + strand, within MPMX20_01793at 1884.136 kb on + strand, within MPMX20_01793at 1884.144 kb on - strand, within MPMX20_01793at 1884.218 kb on + strand, within MPMX20_01793at 1884.231 kb on + strand, within MPMX20_01793at 1884.376 kb on + strandat 1884.398 kb on + strandat 1884.457 kb on + strand, within MPMX20_01794at 1884.538 kb on + strand, within MPMX20_01794at 1884.538 kb on + strand, within MPMX20_01794at 1884.538 kb on + strand, within MPMX20_01794at 1884.538 kb on + strand, within MPMX20_01794at 1884.538 kb on + strand, within MPMX20_01794at 1884.538 kb on + strand, within MPMX20_01794at 1884.538 kb on + strand, within MPMX20_01794at 1884.538 kb on + strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.546 kb on - strand, within MPMX20_01794at 1884.556 kb on + strand, within MPMX20_01794at 1884.572 kb on - strand, within MPMX20_01794at 1884.646 kb on + strand, within MPMX20_01794at 1884.646 kb on + strand, within MPMX20_01794at 1884.646 kb on + strand, within MPMX20_01794at 1884.761 kb on + strand, within MPMX20_01794at 1884.769 kb on - strand, within MPMX20_01794at 1884.798 kb on - strand, within MPMX20_01794at 1884.829 kb on - strand, within MPMX20_01794at 1884.837 kb on + strand, within MPMX20_01794at 1884.854 kb on - strand, within MPMX20_01794at 1884.878 kb on - strand, within MPMX20_01794at 1884.878 kb on - strand, within MPMX20_01794at 1884.880 kb on + strand, within MPMX20_01794at 1884.888 kb on - strand, within MPMX20_01794at 1884.892 kb on + strand, within MPMX20_01794at 1884.900 kb on + strand, within MPMX20_01794at 1884.905 kb on + strand, within MPMX20_01794at 1884.910 kb on + strand, within MPMX20_01794at 1884.918 kb on - strand, within MPMX20_01794at 1884.918 kb on - strand, within MPMX20_01794at 1884.933 kb on - strand, within MPMX20_01794at 1884.962 kb on - strand, within MPMX20_01794at 1884.984 kb on - strand, within MPMX20_01794at 1884.989 kb on - strand, within MPMX20_01794at 1885.037 kb on + strand, within MPMX20_01794at 1885.045 kb on - strand, within MPMX20_01794at 1885.080 kb on + strand, within MPMX20_01794at 1885.082 kb on - strand, within MPMX20_01794

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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1,883,016 - +0.1
1,883,092 + +0.3
1,883,143 - -1.6
1,883,143 - -2.5
1,883,143 - +0.2
1,883,147 + -0.4
1,883,162 + +0.0
1,883,363 + MPMX20_01792 0.38 -0.3
1,883,363 + MPMX20_01792 0.38 -1.7
1,883,371 - MPMX20_01792 0.39 +1.2
1,883,371 - MPMX20_01792 0.39 +0.8
1,883,383 - MPMX20_01792 0.41 +0.0
1,883,389 - MPMX20_01792 0.42 -0.2
1,883,390 - MPMX20_01792 0.42 -1.8
1,883,407 - MPMX20_01792 0.45 +1.0
1,883,409 + MPMX20_01792 0.45 +0.1
1,883,452 - MPMX20_01792 0.52 -2.3
1,883,474 + MPMX20_01792 0.56 -0.7
1,883,531 + MPMX20_01792 0.64 -1.3
1,883,549 - MPMX20_01792 0.67 -2.3
1,883,549 - MPMX20_01792 0.67 -0.4
1,883,549 - MPMX20_01792 0.67 -2.1
1,883,549 - MPMX20_01792 0.67 -1.9
1,883,551 + MPMX20_01792 0.68 +1.8
1,883,551 + MPMX20_01792 0.68 +3.5
1,883,551 + MPMX20_01792 0.68 -0.2
1,883,551 + MPMX20_01792 0.68 -0.1
1,883,551 + MPMX20_01792 0.68 -2.6
1,883,551 + MPMX20_01792 0.68 +0.1
1,883,559 - MPMX20_01792 0.69 -0.9
1,883,559 - MPMX20_01792 0.69 +0.2
1,883,559 - MPMX20_01792 0.69 -0.1
1,883,559 - MPMX20_01792 0.69 -1.4
1,883,559 - MPMX20_01792 0.69 -0.4
1,883,559 - MPMX20_01792 0.69 +1.4
1,883,559 - MPMX20_01792 0.69 -0.2
1,883,559 - MPMX20_01792 0.69 -1.2
1,883,559 - MPMX20_01792 0.69 +0.5
1,883,559 - MPMX20_01792 0.69 -0.2
1,883,559 - MPMX20_01792 0.69 -1.1
1,883,559 - MPMX20_01792 0.69 -2.8
1,883,675 - MPMX20_01792 0.87 -1.5
1,883,676 - MPMX20_01792 0.87 -0.9
1,883,687 - MPMX20_01792 0.89 -1.0
1,883,697 + +0.4
1,883,779 - +1.1
1,883,970 + -0.9
1,884,028 + MPMX20_01793 0.10 -1.3
1,884,081 + MPMX20_01793 0.31 -2.6
1,884,097 - MPMX20_01793 0.37 -1.9
1,884,131 + MPMX20_01793 0.50 -2.5
1,884,136 + MPMX20_01793 0.52 -0.6
1,884,144 - MPMX20_01793 0.55 +0.7
1,884,218 + MPMX20_01793 0.84 -1.5
1,884,231 + MPMX20_01793 0.89 +1.0
1,884,376 + -0.2
1,884,398 + -1.5
1,884,457 + MPMX20_01794 0.12 +0.1
1,884,538 + MPMX20_01794 0.21 +0.0
1,884,538 + MPMX20_01794 0.21 -0.6
1,884,538 + MPMX20_01794 0.21 -1.3
1,884,538 + MPMX20_01794 0.21 -0.5
1,884,538 + MPMX20_01794 0.21 +0.8
1,884,538 + MPMX20_01794 0.21 +0.6
1,884,538 + MPMX20_01794 0.21 -1.5
1,884,538 + MPMX20_01794 0.21 +0.3
1,884,546 - MPMX20_01794 0.22 +1.8
1,884,546 - MPMX20_01794 0.22 -0.4
1,884,546 - MPMX20_01794 0.22 -2.4
1,884,546 - MPMX20_01794 0.22 +0.8
1,884,546 - MPMX20_01794 0.22 -2.5
1,884,546 - MPMX20_01794 0.22 -0.2
1,884,546 - MPMX20_01794 0.22 +0.3
1,884,546 - MPMX20_01794 0.22 +0.6
1,884,546 - MPMX20_01794 0.22 +1.5
1,884,546 - MPMX20_01794 0.22 +1.5
1,884,556 + MPMX20_01794 0.23 -0.7
1,884,572 - MPMX20_01794 0.24 -0.2
1,884,646 + MPMX20_01794 0.32 +0.3
1,884,646 + MPMX20_01794 0.32 -1.6
1,884,646 + MPMX20_01794 0.32 +0.3
1,884,761 + MPMX20_01794 0.44 +0.6
1,884,769 - MPMX20_01794 0.45 +2.1
1,884,798 - MPMX20_01794 0.48 +1.8
1,884,829 - MPMX20_01794 0.51 +0.6
1,884,837 + MPMX20_01794 0.52 -1.6
1,884,854 - MPMX20_01794 0.53 -1.0
1,884,878 - MPMX20_01794 0.56 -0.3
1,884,878 - MPMX20_01794 0.56 +0.3
1,884,880 + MPMX20_01794 0.56 -3.0
1,884,888 - MPMX20_01794 0.57 +0.9
1,884,892 + MPMX20_01794 0.57 +2.3
1,884,900 + MPMX20_01794 0.58 -1.2
1,884,905 + MPMX20_01794 0.59 +0.8
1,884,910 + MPMX20_01794 0.59 +0.1
1,884,918 - MPMX20_01794 0.60 +0.3
1,884,918 - MPMX20_01794 0.60 -0.7
1,884,933 - MPMX20_01794 0.62 -0.8
1,884,962 - MPMX20_01794 0.65 -0.2
1,884,984 - MPMX20_01794 0.67 -1.9
1,884,989 - MPMX20_01794 0.67 -0.4
1,885,037 + MPMX20_01794 0.72 -1.1
1,885,045 - MPMX20_01794 0.73 -0.4
1,885,080 + MPMX20_01794 0.77 -0.2
1,885,082 - MPMX20_01794 0.77 -1.3

Or see this region's nucleotide sequence