Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00316

Experiment: TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00315 and MPMX20_00316 overlap by 4 nucleotidesMPMX20_00316 and MPMX20_00317 are separated by 9 nucleotidesMPMX20_00317 and MPMX20_00318 overlap by 4 nucleotides MPMX20_00315: MPMX20_00315 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase, at 335,310 to 336,446 _00315 MPMX20_00316: MPMX20_00316 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL, at 336,443 to 337,123 _00316 MPMX20_00317: MPMX20_00317 - Putative phosphonates utilization ATP-binding protein PhnK, at 337,133 to 337,888 _00317 MPMX20_00318: MPMX20_00318 - Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, at 337,885 to 338,730 _00318 Position (kb) 336 337 338Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 335.467 kb on + strand, within MPMX20_00315at 335.477 kb on + strand, within MPMX20_00315at 335.548 kb on + strand, within MPMX20_00315at 335.556 kb on - strand, within MPMX20_00315at 335.559 kb on + strand, within MPMX20_00315at 335.607 kb on - strand, within MPMX20_00315at 335.656 kb on - strand, within MPMX20_00315at 335.741 kb on + strand, within MPMX20_00315at 335.781 kb on - strand, within MPMX20_00315at 335.932 kb on + strand, within MPMX20_00315at 335.942 kb on + strand, within MPMX20_00315at 335.945 kb on - strand, within MPMX20_00315at 335.963 kb on - strand, within MPMX20_00315at 335.966 kb on + strand, within MPMX20_00315at 335.971 kb on + strand, within MPMX20_00315at 336.014 kb on - strand, within MPMX20_00315at 336.018 kb on + strand, within MPMX20_00315at 336.044 kb on + strand, within MPMX20_00315at 336.044 kb on + strand, within MPMX20_00315at 336.105 kb on - strand, within MPMX20_00315at 336.173 kb on - strand, within MPMX20_00315at 336.228 kb on + strand, within MPMX20_00315at 336.345 kb on + strandat 336.377 kb on - strandat 336.425 kb on + strandat 336.433 kb on - strandat 336.534 kb on + strand, within MPMX20_00316at 336.542 kb on - strand, within MPMX20_00316at 336.542 kb on - strand, within MPMX20_00316at 336.561 kb on - strand, within MPMX20_00316at 336.572 kb on + strand, within MPMX20_00316at 336.685 kb on + strand, within MPMX20_00316at 336.760 kb on - strand, within MPMX20_00316at 336.776 kb on - strand, within MPMX20_00316at 336.800 kb on - strand, within MPMX20_00316at 336.802 kb on + strand, within MPMX20_00316at 336.810 kb on - strand, within MPMX20_00316at 336.892 kb on + strand, within MPMX20_00316at 336.932 kb on - strand, within MPMX20_00316at 336.976 kb on - strand, within MPMX20_00316at 337.012 kb on - strand, within MPMX20_00316at 337.017 kb on + strand, within MPMX20_00316at 337.033 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.049 kb on + strand, within MPMX20_00316at 337.057 kb on - strandat 337.094 kb on + strandat 337.102 kb on - strandat 337.118 kb on + strandat 337.118 kb on + strandat 337.118 kb on + strandat 337.126 kb on - strandat 337.129 kb on - strandat 337.156 kb on - strandat 337.279 kb on - strand, within MPMX20_00317at 337.323 kb on - strand, within MPMX20_00317at 337.323 kb on - strand, within MPMX20_00317at 337.366 kb on + strand, within MPMX20_00317at 337.368 kb on - strand, within MPMX20_00317at 337.384 kb on - strand, within MPMX20_00317at 337.457 kb on + strand, within MPMX20_00317at 337.519 kb on - strand, within MPMX20_00317at 337.519 kb on - strand, within MPMX20_00317at 337.672 kb on + strand, within MPMX20_00317at 337.729 kb on + strand, within MPMX20_00317at 337.768 kb on + strand, within MPMX20_00317at 337.795 kb on - strand, within MPMX20_00317at 337.795 kb on - strand, within MPMX20_00317at 337.801 kb on - strand, within MPMX20_00317at 337.810 kb on + strand, within MPMX20_00317at 337.811 kb on - strand, within MPMX20_00317at 337.841 kb on - strandat 337.845 kb on + strandat 337.853 kb on - strandat 337.854 kb on - strandat 337.869 kb on + strandat 338.025 kb on + strand, within MPMX20_00318at 338.071 kb on + strand, within MPMX20_00318at 338.071 kb on + strand, within MPMX20_00318at 338.079 kb on - strand, within MPMX20_00318at 338.087 kb on + strand, within MPMX20_00318at 338.119 kb on - strand, within MPMX20_00318at 338.121 kb on + strand, within MPMX20_00318

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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335,467 + MPMX20_00315 0.14 +2.7
335,477 + MPMX20_00315 0.15 -0.3
335,548 + MPMX20_00315 0.21 -1.0
335,556 - MPMX20_00315 0.22 -1.2
335,559 + MPMX20_00315 0.22 +1.1
335,607 - MPMX20_00315 0.26 +0.7
335,656 - MPMX20_00315 0.30 -2.4
335,741 + MPMX20_00315 0.38 +0.7
335,781 - MPMX20_00315 0.41 -1.3
335,932 + MPMX20_00315 0.55 +0.9
335,942 + MPMX20_00315 0.56 -2.1
335,945 - MPMX20_00315 0.56 -0.0
335,963 - MPMX20_00315 0.57 +0.4
335,966 + MPMX20_00315 0.58 -1.3
335,971 + MPMX20_00315 0.58 -0.2
336,014 - MPMX20_00315 0.62 -0.5
336,018 + MPMX20_00315 0.62 -0.3
336,044 + MPMX20_00315 0.65 -1.9
336,044 + MPMX20_00315 0.65 +2.7
336,105 - MPMX20_00315 0.70 +0.2
336,173 - MPMX20_00315 0.76 -1.0
336,228 + MPMX20_00315 0.81 -3.4
336,345 + -2.2
336,377 - -0.9
336,425 + -0.4
336,433 - -0.6
336,534 + MPMX20_00316 0.13 -1.9
336,542 - MPMX20_00316 0.15 +0.3
336,542 - MPMX20_00316 0.15 -2.9
336,561 - MPMX20_00316 0.17 -2.3
336,572 + MPMX20_00316 0.19 -0.9
336,685 + MPMX20_00316 0.36 -0.1
336,760 - MPMX20_00316 0.47 -1.1
336,776 - MPMX20_00316 0.49 +0.7
336,800 - MPMX20_00316 0.52 -0.4
336,802 + MPMX20_00316 0.53 -1.0
336,810 - MPMX20_00316 0.54 -1.1
336,892 + MPMX20_00316 0.66 -0.6
336,932 - MPMX20_00316 0.72 -0.9
336,976 - MPMX20_00316 0.78 +0.7
337,012 - MPMX20_00316 0.84 -1.6
337,017 + MPMX20_00316 0.84 -1.0
337,033 + MPMX20_00316 0.87 -1.6
337,049 + MPMX20_00316 0.89 -2.0
337,049 + MPMX20_00316 0.89 +1.1
337,049 + MPMX20_00316 0.89 -1.3
337,049 + MPMX20_00316 0.89 +0.7
337,049 + MPMX20_00316 0.89 +1.7
337,057 - +1.7
337,094 + -1.1
337,102 - +0.4
337,118 + -1.0
337,118 + -2.2
337,118 + -0.3
337,126 - -1.3
337,129 - -0.0
337,156 - -0.9
337,279 - MPMX20_00317 0.19 -1.2
337,323 - MPMX20_00317 0.25 +1.1
337,323 - MPMX20_00317 0.25 -0.9
337,366 + MPMX20_00317 0.31 +0.4
337,368 - MPMX20_00317 0.31 -0.6
337,384 - MPMX20_00317 0.33 -0.0
337,457 + MPMX20_00317 0.43 -0.9
337,519 - MPMX20_00317 0.51 -0.1
337,519 - MPMX20_00317 0.51 +0.1
337,672 + MPMX20_00317 0.71 -0.3
337,729 + MPMX20_00317 0.79 -1.3
337,768 + MPMX20_00317 0.84 -1.6
337,795 - MPMX20_00317 0.88 -1.8
337,795 - MPMX20_00317 0.88 -2.2
337,801 - MPMX20_00317 0.88 -1.2
337,810 + MPMX20_00317 0.90 -0.9
337,811 - MPMX20_00317 0.90 -3.1
337,841 - +0.4
337,845 + -0.6
337,853 - -1.0
337,854 - -1.8
337,869 + -0.3
338,025 + MPMX20_00318 0.17 -1.2
338,071 + MPMX20_00318 0.22 -1.1
338,071 + MPMX20_00318 0.22 -1.4
338,079 - MPMX20_00318 0.23 +0.6
338,087 + MPMX20_00318 0.24 -1.1
338,119 - MPMX20_00318 0.28 -0.3
338,121 + MPMX20_00318 0.28 -2.4

Or see this region's nucleotide sequence