Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04606 and MPMX20_04607 overlap by 4 nucleotides MPMX20_04607 and MPMX20_04608 are separated by 77 nucleotides MPMX20_04608 and MPMX20_04609 are separated by 67 nucleotides MPMX20_04609 and MPMX20_04610 are separated by 194 nucleotides MPMX20_04610 and MPMX20_04611 are separated by 86 nucleotides
MPMX20_04606: MPMX20_04606 - Molybdenum cofactor guanylyltransferase, at 4,823,358 to 4,823,942
_04606
MPMX20_04607: MPMX20_04607 - Molybdopterin-guanine dinucleotide biosynthesis adapter protein, at 4,823,939 to 4,824,442
_04607
MPMX20_04608: MPMX20_04608 - 5S ribosomal RNA, at 4,824,520 to 4,824,630
_04608
MPMX20_04609: MPMX20_04609 - 23S ribosomal RNA, at 4,824,698 to 4,827,601
_04609
MPMX20_04610: MPMX20_04610 - tRNA-Glu, at 4,827,796 to 4,827,871
_04610
MPMX20_04611: MPMX20_04611 - 16S ribosomal RNA, at 4,827,958 to 4,829,493
_04611
Position (kb)
4824
4825
4826
4827
4828 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4823.702 kb on + strand, within MPMX20_04606 at 4823.732 kb on - strand, within MPMX20_04606 at 4823.763 kb on + strand, within MPMX20_04606 at 4823.776 kb on - strand, within MPMX20_04606 at 4823.819 kb on - strand, within MPMX20_04606 at 4823.963 kb on + strand at 4823.968 kb on + strand at 4824.006 kb on + strand, within MPMX20_04607 at 4824.093 kb on + strand, within MPMX20_04607 at 4824.093 kb on + strand, within MPMX20_04607 at 4824.093 kb on + strand, within MPMX20_04607 at 4824.093 kb on + strand, within MPMX20_04607 at 4824.101 kb on - strand, within MPMX20_04607 at 4824.127 kb on - strand, within MPMX20_04607 at 4824.127 kb on - strand, within MPMX20_04607 at 4824.140 kb on + strand, within MPMX20_04607 at 4824.153 kb on - strand, within MPMX20_04607 at 4824.153 kb on - strand, within MPMX20_04607 at 4824.224 kb on + strand, within MPMX20_04607 at 4824.291 kb on - strand, within MPMX20_04607 at 4824.291 kb on - strand, within MPMX20_04607 at 4824.308 kb on - strand, within MPMX20_04607 at 4824.308 kb on - strand, within MPMX20_04607 at 4824.359 kb on + strand, within MPMX20_04607 at 4824.367 kb on - strand, within MPMX20_04607 at 4824.367 kb on - strand, within MPMX20_04607 at 4824.396 kb on + strand at 4824.396 kb on + strand at 4824.396 kb on + strand at 4824.445 kb on - strand at 4824.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,823,702 + MPMX20_04606 0.59 -0.9 4,823,732 - MPMX20_04606 0.64 -0.5 4,823,763 + MPMX20_04606 0.69 -1.1 4,823,776 - MPMX20_04606 0.71 +1.8 4,823,819 - MPMX20_04606 0.79 +0.3 4,823,963 + -0.2 4,823,968 + -0.3 4,824,006 + MPMX20_04607 0.13 +0.3 4,824,093 + MPMX20_04607 0.31 +0.7 4,824,093 + MPMX20_04607 0.31 -1.8 4,824,093 + MPMX20_04607 0.31 -1.2 4,824,093 + MPMX20_04607 0.31 -0.2 4,824,101 - MPMX20_04607 0.32 -0.9 4,824,127 - MPMX20_04607 0.37 +0.0 4,824,127 - MPMX20_04607 0.37 +1.1 4,824,140 + MPMX20_04607 0.40 +0.0 4,824,153 - MPMX20_04607 0.42 +0.5 4,824,153 - MPMX20_04607 0.42 +0.2 4,824,224 + MPMX20_04607 0.57 -1.5 4,824,291 - MPMX20_04607 0.70 -0.0 4,824,291 - MPMX20_04607 0.70 -0.3 4,824,308 - MPMX20_04607 0.73 +0.3 4,824,308 - MPMX20_04607 0.73 +2.1 4,824,359 + MPMX20_04607 0.83 -0.1 4,824,367 - MPMX20_04607 0.85 -0.8 4,824,367 - MPMX20_04607 0.85 +0.2 4,824,396 + +3.8 4,824,396 + +0.3 4,824,396 + -0.8 4,824,445 - +1.0 4,824,445 - -0.2
Or see this region's nucleotide sequence