Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04286 and MPMX20_04287 are separated by 67 nucleotides MPMX20_04287 and MPMX20_04288 overlap by 4 nucleotides MPMX20_04288 and MPMX20_04289 are separated by 24 nucleotides
MPMX20_04286: MPMX20_04286 - Intracellular growth attenuator protein igaA, at 4,469,549 to 4,471,684
_04286
MPMX20_04287: MPMX20_04287 - GMP/IMP nucleotidase YrfG, at 4,471,752 to 4,472,435
_04287
MPMX20_04288: MPMX20_04288 - Heat shock protein 15, at 4,472,432 to 4,472,833
_04288
MPMX20_04289: MPMX20_04289 - 33 kDa chaperonin, at 4,472,858 to 4,473,736
_04289
Position (kb)
4472
4473 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4471.642 kb on + strand at 4471.647 kb on + strand at 4471.647 kb on + strand at 4471.647 kb on + strand at 4471.647 kb on + strand at 4471.655 kb on - strand at 4471.660 kb on + strand at 4471.715 kb on - strand at 4471.715 kb on - strand at 4471.720 kb on - strand at 4471.743 kb on - strand at 4471.805 kb on - strand at 4471.865 kb on - strand, within MPMX20_04287 at 4471.905 kb on + strand, within MPMX20_04287 at 4471.957 kb on + strand, within MPMX20_04287 at 4471.957 kb on + strand, within MPMX20_04287 at 4471.957 kb on + strand, within MPMX20_04287 at 4471.965 kb on - strand, within MPMX20_04287 at 4471.965 kb on - strand, within MPMX20_04287 at 4471.965 kb on - strand, within MPMX20_04287 at 4471.965 kb on - strand, within MPMX20_04287 at 4471.965 kb on - strand, within MPMX20_04287 at 4471.965 kb on - strand, within MPMX20_04287 at 4471.965 kb on - strand, within MPMX20_04287 at 4471.965 kb on - strand, within MPMX20_04287 at 4471.974 kb on - strand, within MPMX20_04287 at 4471.986 kb on - strand, within MPMX20_04287 at 4472.104 kb on - strand, within MPMX20_04287 at 4472.128 kb on + strand, within MPMX20_04287 at 4472.209 kb on - strand, within MPMX20_04287 at 4472.218 kb on - strand, within MPMX20_04287 at 4472.291 kb on - strand, within MPMX20_04287 at 4472.302 kb on + strand, within MPMX20_04287 at 4472.324 kb on + strand, within MPMX20_04287 at 4472.340 kb on + strand, within MPMX20_04287 at 4472.349 kb on - strand, within MPMX20_04287 at 4472.382 kb on - strand at 4472.382 kb on - strand at 4472.404 kb on + strand at 4472.416 kb on + strand at 4472.424 kb on - strand at 4472.454 kb on + strand at 4472.464 kb on + strand at 4472.473 kb on + strand, within MPMX20_04288 at 4472.481 kb on - strand, within MPMX20_04288 at 4472.592 kb on + strand, within MPMX20_04288 at 4472.592 kb on + strand, within MPMX20_04288 at 4472.600 kb on - strand, within MPMX20_04288 at 4472.600 kb on - strand, within MPMX20_04288 at 4472.600 kb on - strand, within MPMX20_04288 at 4472.600 kb on - strand, within MPMX20_04288 at 4472.621 kb on - strand, within MPMX20_04288 at 4472.632 kb on + strand, within MPMX20_04288 at 4472.659 kb on + strand, within MPMX20_04288 at 4472.675 kb on + strand, within MPMX20_04288 at 4472.683 kb on - strand, within MPMX20_04288 at 4472.696 kb on + strand, within MPMX20_04288 at 4472.696 kb on + strand, within MPMX20_04288 at 4472.704 kb on - strand, within MPMX20_04288 at 4472.747 kb on - strand, within MPMX20_04288 at 4472.771 kb on - strand, within MPMX20_04288 at 4472.818 kb on + strand at 4472.826 kb on - strand at 4472.836 kb on - strand at 4472.836 kb on - strand at 4472.841 kb on - strand at 4472.863 kb on - strand at 4473.181 kb on + strand, within MPMX20_04289 at 4473.189 kb on - strand, within MPMX20_04289 at 4473.243 kb on - strand, within MPMX20_04289 at 4473.294 kb on + strand, within MPMX20_04289 at 4473.294 kb on + strand, within MPMX20_04289 at 4473.294 kb on + strand, within MPMX20_04289 at 4473.312 kb on - strand, within MPMX20_04289 at 4473.331 kb on + strand, within MPMX20_04289 at 4473.416 kb on - strand, within MPMX20_04289 at 4473.426 kb on - strand, within MPMX20_04289 at 4473.439 kb on + strand, within MPMX20_04289 at 4473.452 kb on - strand, within MPMX20_04289 at 4473.479 kb on + strand, within MPMX20_04289 at 4473.557 kb on + strand, within MPMX20_04289 at 4473.565 kb on - strand, within MPMX20_04289 at 4473.643 kb on - strand, within MPMX20_04289 at 4473.746 kb on + strand at 4473.751 kb on + strand at 4473.752 kb on + strand at 4473.752 kb on + strand at 4473.794 kb on + strand at 4473.812 kb on + strand at 4473.830 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,471,642 + -2.2 4,471,647 + +0.1 4,471,647 + +1.8 4,471,647 + -1.8 4,471,647 + -1.3 4,471,655 - +0.2 4,471,660 + +1.2 4,471,715 - -0.5 4,471,715 - +0.5 4,471,720 - -1.4 4,471,743 - -1.4 4,471,805 - -0.8 4,471,865 - MPMX20_04287 0.17 -2.4 4,471,905 + MPMX20_04287 0.22 -0.8 4,471,957 + MPMX20_04287 0.30 +1.2 4,471,957 + MPMX20_04287 0.30 -0.4 4,471,957 + MPMX20_04287 0.30 +0.4 4,471,965 - MPMX20_04287 0.31 +1.2 4,471,965 - MPMX20_04287 0.31 -1.8 4,471,965 - MPMX20_04287 0.31 +0.4 4,471,965 - MPMX20_04287 0.31 +1.0 4,471,965 - MPMX20_04287 0.31 -0.4 4,471,965 - MPMX20_04287 0.31 -0.3 4,471,965 - MPMX20_04287 0.31 +0.0 4,471,965 - MPMX20_04287 0.31 +1.2 4,471,974 - MPMX20_04287 0.32 +0.8 4,471,986 - MPMX20_04287 0.34 -0.1 4,472,104 - MPMX20_04287 0.51 -0.5 4,472,128 + MPMX20_04287 0.55 +0.5 4,472,209 - MPMX20_04287 0.67 +0.5 4,472,218 - MPMX20_04287 0.68 +1.2 4,472,291 - MPMX20_04287 0.79 -1.0 4,472,302 + MPMX20_04287 0.80 -0.1 4,472,324 + MPMX20_04287 0.84 -0.5 4,472,340 + MPMX20_04287 0.86 -0.7 4,472,349 - MPMX20_04287 0.87 -1.3 4,472,382 - -0.2 4,472,382 - -0.4 4,472,404 + +0.5 4,472,416 + -1.4 4,472,424 - -0.1 4,472,454 + -0.6 4,472,464 + +1.1 4,472,473 + MPMX20_04288 0.10 +3.2 4,472,481 - MPMX20_04288 0.12 +1.2 4,472,592 + MPMX20_04288 0.40 -1.7 4,472,592 + MPMX20_04288 0.40 -0.7 4,472,600 - MPMX20_04288 0.42 +1.0 4,472,600 - MPMX20_04288 0.42 -1.4 4,472,600 - MPMX20_04288 0.42 +0.2 4,472,600 - MPMX20_04288 0.42 +0.8 4,472,621 - MPMX20_04288 0.47 -0.0 4,472,632 + MPMX20_04288 0.50 -0.3 4,472,659 + MPMX20_04288 0.56 +4.3 4,472,675 + MPMX20_04288 0.60 -0.4 4,472,683 - MPMX20_04288 0.62 +0.3 4,472,696 + MPMX20_04288 0.66 +0.5 4,472,696 + MPMX20_04288 0.66 +1.5 4,472,704 - MPMX20_04288 0.68 +1.2 4,472,747 - MPMX20_04288 0.78 -1.0 4,472,771 - MPMX20_04288 0.84 -1.7 4,472,818 + +1.5 4,472,826 - +0.5 4,472,836 - -1.0 4,472,836 - -0.0 4,472,841 - -0.8 4,472,863 - +0.8 4,473,181 + MPMX20_04289 0.37 +1.8 4,473,189 - MPMX20_04289 0.38 -2.4 4,473,243 - MPMX20_04289 0.44 -0.6 4,473,294 + MPMX20_04289 0.50 -1.5 4,473,294 + MPMX20_04289 0.50 +0.1 4,473,294 + MPMX20_04289 0.50 -0.5 4,473,312 - MPMX20_04289 0.52 -0.7 4,473,331 + MPMX20_04289 0.54 -0.5 4,473,416 - MPMX20_04289 0.63 -0.3 4,473,426 - MPMX20_04289 0.65 -0.5 4,473,439 + MPMX20_04289 0.66 -2.4 4,473,452 - MPMX20_04289 0.68 +1.8 4,473,479 + MPMX20_04289 0.71 -0.6 4,473,557 + MPMX20_04289 0.80 +1.2 4,473,565 - MPMX20_04289 0.80 -1.0 4,473,643 - MPMX20_04289 0.89 +0.1 4,473,746 + -1.1 4,473,751 + -1.4 4,473,752 + -0.1 4,473,752 + -0.1 4,473,794 + -0.3 4,473,812 + -1.0 4,473,830 - +0.8
Or see this region's nucleotide sequence