Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04131 and MPMX20_04132 are separated by 379 nucleotides MPMX20_04132 and MPMX20_04133 overlap by 1 nucleotides MPMX20_04133 and MPMX20_04134 are separated by 312 nucleotides MPMX20_04134 and MPMX20_04135 are separated by 15 nucleotides
MPMX20_04131: MPMX20_04131 - Protein GltF, at 4,332,330 to 4,333,013
_04131
MPMX20_04132: MPMX20_04132 - Stringent starvation protein B, at 4,333,393 to 4,333,890
_04132
MPMX20_04133: MPMX20_04133 - Stringent starvation protein A, at 4,333,890 to 4,334,528
_04133
MPMX20_04134: MPMX20_04134 - 30S ribosomal protein S9, at 4,334,841 to 4,335,233
_04134
MPMX20_04135: MPMX20_04135 - 50S ribosomal protein L13, at 4,335,249 to 4,335,677
_04135
Position (kb)
4333
4334
4335 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6 at 4332.891 kb on + strand, within MPMX20_04131 at 4332.893 kb on + strand, within MPMX20_04131 at 4332.896 kb on + strand, within MPMX20_04131 at 4332.896 kb on - strand, within MPMX20_04131 at 4332.901 kb on + strand, within MPMX20_04131 at 4332.906 kb on + strand, within MPMX20_04131 at 4332.906 kb on + strand, within MPMX20_04131 at 4332.906 kb on + strand, within MPMX20_04131 at 4332.906 kb on + strand, within MPMX20_04131 at 4332.906 kb on + strand, within MPMX20_04131 at 4332.906 kb on + strand, within MPMX20_04131 at 4332.910 kb on + strand, within MPMX20_04131 at 4332.910 kb on + strand, within MPMX20_04131 at 4332.910 kb on + strand, within MPMX20_04131 at 4332.910 kb on + strand, within MPMX20_04131 at 4332.910 kb on + strand, within MPMX20_04131 at 4332.910 kb on + strand, within MPMX20_04131 at 4332.910 kb on + strand, within MPMX20_04131 at 4332.910 kb on + strand, within MPMX20_04131 at 4332.914 kb on - strand, within MPMX20_04131 at 4332.914 kb on - strand, within MPMX20_04131 at 4332.920 kb on + strand, within MPMX20_04131 at 4332.924 kb on + strand, within MPMX20_04131 at 4332.924 kb on + strand, within MPMX20_04131 at 4332.924 kb on + strand, within MPMX20_04131 at 4332.924 kb on + strand, within MPMX20_04131 at 4332.925 kb on + strand, within MPMX20_04131 at 4332.925 kb on + strand, within MPMX20_04131 at 4332.925 kb on + strand, within MPMX20_04131 at 4332.928 kb on - strand, within MPMX20_04131 at 4332.933 kb on - strand, within MPMX20_04131 at 4332.933 kb on - strand, within MPMX20_04131 at 4332.933 kb on - strand, within MPMX20_04131 at 4332.941 kb on + strand, within MPMX20_04131 at 4332.943 kb on + strand, within MPMX20_04131 at 4332.943 kb on + strand, within MPMX20_04131 at 4332.943 kb on + strand, within MPMX20_04131 at 4332.943 kb on + strand, within MPMX20_04131 at 4332.943 kb on + strand, within MPMX20_04131 at 4332.943 kb on + strand, within MPMX20_04131 at 4332.943 kb on + strand, within MPMX20_04131 at 4332.946 kb on + strand at 4332.950 kb on + strand at 4332.950 kb on + strand at 4332.951 kb on - strand at 4332.967 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.970 kb on + strand at 4332.972 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.974 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.976 kb on + strand at 4332.981 kb on + strand at 4332.981 kb on + strand at 4332.982 kb on - strand at 4332.984 kb on + strand at 4332.984 kb on + strand at 4332.984 kb on + strand at 4332.984 kb on + strand at 4332.984 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.986 kb on + strand at 4332.996 kb on + strand at 4332.997 kb on + strand at 4332.997 kb on + strand at 4333.015 kb on + strand at 4333.028 kb on + strand at 4333.096 kb on + strand at 4333.275 kb on - strand at 4333.275 kb on - strand at 4333.325 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.360 kb on - strand at 4333.401 kb on - strand at 4333.403 kb on - strand at 4333.403 kb on - strand at 4333.403 kb on - strand at 4333.410 kb on + strand at 4333.410 kb on + strand at 4333.413 kb on - strand at 4333.413 kb on - strand at 4333.413 kb on - strand at 4333.413 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.418 kb on - strand at 4333.420 kb on - strand at 4333.428 kb on - strand at 4333.428 kb on - strand at 4333.428 kb on - strand at 4333.428 kb on - strand at 4333.428 kb on - strand at 4333.428 kb on - strand at 4333.474 kb on - strand, within MPMX20_04132 at 4333.483 kb on - strand, within MPMX20_04132 at 4333.502 kb on - strand, within MPMX20_04132 at 4333.626 kb on + strand, within MPMX20_04132 at 4333.691 kb on + strand, within MPMX20_04132 at 4333.692 kb on + strand, within MPMX20_04132 at 4333.692 kb on + strand, within MPMX20_04132 at 4333.692 kb on + strand, within MPMX20_04132 at 4333.697 kb on + strand, within MPMX20_04132 at 4333.700 kb on - strand, within MPMX20_04132 at 4333.705 kb on - strand, within MPMX20_04132 at 4333.788 kb on - strand, within MPMX20_04132 at 4333.797 kb on + strand, within MPMX20_04132 at 4333.838 kb on - strand, within MPMX20_04132 at 4333.869 kb on + strand at 4333.933 kb on - strand at 4333.934 kb on - strand at 4334.018 kb on + strand, within MPMX20_04133 at 4334.025 kb on - strand, within MPMX20_04133 at 4334.029 kb on + strand, within MPMX20_04133 at 4334.029 kb on + strand, within MPMX20_04133 at 4334.062 kb on + strand, within MPMX20_04133 at 4334.190 kb on - strand, within MPMX20_04133 at 4334.268 kb on - strand, within MPMX20_04133 at 4334.296 kb on - strand, within MPMX20_04133 at 4334.363 kb on - strand, within MPMX20_04133 at 4334.449 kb on + strand, within MPMX20_04133 at 4334.457 kb on - strand, within MPMX20_04133 at 4334.457 kb on - strand, within MPMX20_04133 at 4334.575 kb on - strand at 4334.585 kb on - strand at 4334.699 kb on + strand at 4334.699 kb on + strand at 4334.699 kb on + strand at 4334.707 kb on - strand at 4334.707 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,332,891 + MPMX20_04131 0.82 -1.1 4,332,893 + MPMX20_04131 0.82 -1.7 4,332,896 + MPMX20_04131 0.83 -0.0 4,332,896 - MPMX20_04131 0.83 +2.8 4,332,901 + MPMX20_04131 0.83 -0.0 4,332,906 + MPMX20_04131 0.84 +0.8 4,332,906 + MPMX20_04131 0.84 +1.0 4,332,906 + MPMX20_04131 0.84 -1.0 4,332,906 + MPMX20_04131 0.84 -0.1 4,332,906 + MPMX20_04131 0.84 +0.5 4,332,906 + MPMX20_04131 0.84 +0.3 4,332,910 + MPMX20_04131 0.85 -0.7 4,332,910 + MPMX20_04131 0.85 -1.0 4,332,910 + MPMX20_04131 0.85 -1.5 4,332,910 + MPMX20_04131 0.85 -0.7 4,332,910 + MPMX20_04131 0.85 +0.1 4,332,910 + MPMX20_04131 0.85 +1.8 4,332,910 + MPMX20_04131 0.85 -2.2 4,332,910 + MPMX20_04131 0.85 -0.8 4,332,914 - MPMX20_04131 0.85 -0.9 4,332,914 - MPMX20_04131 0.85 +0.8 4,332,920 + MPMX20_04131 0.86 +0.5 4,332,924 + MPMX20_04131 0.87 +0.8 4,332,924 + MPMX20_04131 0.87 -1.2 4,332,924 + MPMX20_04131 0.87 -0.4 4,332,924 + MPMX20_04131 0.87 -0.8 4,332,925 + MPMX20_04131 0.87 -1.2 4,332,925 + MPMX20_04131 0.87 +0.5 4,332,925 + MPMX20_04131 0.87 +0.4 4,332,928 - MPMX20_04131 0.87 +0.2 4,332,933 - MPMX20_04131 0.88 +2.8 4,332,933 - MPMX20_04131 0.88 -0.0 4,332,933 - MPMX20_04131 0.88 +1.2 4,332,941 + MPMX20_04131 0.89 +0.3 4,332,943 + MPMX20_04131 0.90 +0.2 4,332,943 + MPMX20_04131 0.90 -0.9 4,332,943 + MPMX20_04131 0.90 -0.5 4,332,943 + MPMX20_04131 0.90 -0.2 4,332,943 + MPMX20_04131 0.90 +0.6 4,332,943 + MPMX20_04131 0.90 -0.2 4,332,943 + MPMX20_04131 0.90 -1.0 4,332,946 + +0.1 4,332,950 + -0.0 4,332,950 + -0.6 4,332,951 - +2.8 4,332,967 + -0.0 4,332,970 + +1.8 4,332,970 + -0.1 4,332,970 + +4.1 4,332,970 + -0.2 4,332,970 + +1.8 4,332,970 + +0.5 4,332,970 + +2.8 4,332,970 + -1.4 4,332,970 + -2.0 4,332,970 + -1.0 4,332,970 + -1.3 4,332,970 + -1.3 4,332,970 + -0.6 4,332,970 + +0.2 4,332,970 + +0.8 4,332,970 + +1.5 4,332,970 + +0.3 4,332,970 + -0.9 4,332,970 + -0.0 4,332,970 + -1.5 4,332,970 + +1.0 4,332,972 + +0.2 4,332,974 + -0.3 4,332,974 + +1.2 4,332,974 + -0.2 4,332,974 + +0.5 4,332,974 + -0.6 4,332,974 + +1.0 4,332,974 + -1.3 4,332,974 + -0.6 4,332,974 + +2.8 4,332,974 + -2.1 4,332,974 + -0.6 4,332,976 + +0.2 4,332,976 + +0.7 4,332,976 + +1.2 4,332,976 + +1.6 4,332,976 + -0.2 4,332,976 + +1.8 4,332,976 + -0.5 4,332,976 + +1.6 4,332,976 + +0.8 4,332,976 + -1.3 4,332,976 + -0.8 4,332,976 + -1.7 4,332,976 + -0.2 4,332,976 + -0.5 4,332,976 + +0.2 4,332,976 + -1.8 4,332,976 + -0.3 4,332,976 + +0.0 4,332,976 + -0.8 4,332,976 + -0.0 4,332,976 + -0.8 4,332,976 + +0.5 4,332,981 + +0.5 4,332,981 + -0.3 4,332,982 - +0.5 4,332,984 + -0.0 4,332,984 + -1.2 4,332,984 + +1.8 4,332,984 + +1.2 4,332,984 + -0.9 4,332,986 + -0.4 4,332,986 + +0.1 4,332,986 + -1.0 4,332,986 + -0.3 4,332,986 + +0.8 4,332,986 + +0.6 4,332,986 + +0.1 4,332,986 + +2.8 4,332,986 + -0.0 4,332,986 + +2.8 4,332,986 + -1.9 4,332,986 + -0.7 4,332,986 + +0.8 4,332,986 + -2.2 4,332,986 + -0.7 4,332,986 + +2.8 4,332,986 + -0.4 4,332,996 + +1.4 4,332,997 + +0.0 4,332,997 + +0.6 4,333,015 + +0.6 4,333,028 + -1.5 4,333,096 + +0.5 4,333,275 - +0.5 4,333,275 - +2.8 4,333,325 - +0.2 4,333,360 - +0.3 4,333,360 - -0.7 4,333,360 - +0.2 4,333,360 - +0.2 4,333,360 - -1.1 4,333,360 - +0.5 4,333,360 - -0.0 4,333,360 - -2.6 4,333,360 - -0.6 4,333,360 - +0.5 4,333,360 - -0.8 4,333,360 - +0.3 4,333,360 - -0.5 4,333,360 - -1.1 4,333,360 - -1.6 4,333,360 - -1.6 4,333,401 - -1.4 4,333,403 - -0.7 4,333,403 - +0.1 4,333,403 - -1.4 4,333,410 + +1.2 4,333,410 + +2.2 4,333,413 - -0.5 4,333,413 - -0.0 4,333,413 - +2.8 4,333,413 - -2.0 4,333,418 - +0.6 4,333,418 - +0.2 4,333,418 - +1.2 4,333,418 - -0.0 4,333,418 - +1.5 4,333,418 - -0.7 4,333,418 - +0.1 4,333,418 - +0.9 4,333,418 - -0.7 4,333,418 - -0.0 4,333,418 - -0.7 4,333,418 - +1.0 4,333,418 - +0.3 4,333,418 - -0.9 4,333,418 - -0.3 4,333,418 - +6.5 4,333,418 - -1.1 4,333,418 - +1.2 4,333,418 - -0.5 4,333,418 - -0.2 4,333,418 - +2.5 4,333,418 - +0.2 4,333,418 - -0.9 4,333,418 - +2.2 4,333,418 - -0.0 4,333,418 - -0.3 4,333,418 - -1.4 4,333,418 - +1.8 4,333,418 - -1.5 4,333,418 - -1.2 4,333,418 - -0.5 4,333,418 - +0.0 4,333,418 - +0.4 4,333,418 - +0.3 4,333,418 - +1.0 4,333,418 - -0.3 4,333,418 - -0.2 4,333,418 - +0.5 4,333,418 - +2.8 4,333,418 - +0.6 4,333,418 - +0.8 4,333,418 - -0.3 4,333,418 - +1.5 4,333,418 - -0.7 4,333,418 - -1.3 4,333,418 - -0.0 4,333,418 - -0.5 4,333,418 - -0.0 4,333,418 - -0.4 4,333,418 - +1.3 4,333,418 - -0.8 4,333,418 - +1.0 4,333,418 - -1.0 4,333,418 - -1.1 4,333,418 - -1.7 4,333,418 - -0.9 4,333,418 - +0.3 4,333,418 - -0.8 4,333,418 - +1.3 4,333,418 - -0.5 4,333,418 - -1.2 4,333,418 - -1.2 4,333,418 - -1.2 4,333,418 - +1.5 4,333,418 - -1.5 4,333,418 - -0.9 4,333,418 - -1.0 4,333,418 - +1.7 4,333,418 - -0.6 4,333,418 - -0.5 4,333,418 - -0.8 4,333,418 - +0.8 4,333,418 - +1.0 4,333,418 - -0.1 4,333,418 - -0.5 4,333,418 - -0.1 4,333,418 - -0.5 4,333,418 - +0.5 4,333,420 - +0.2 4,333,428 - -0.0 4,333,428 - -0.3 4,333,428 - +0.3 4,333,428 - -0.3 4,333,428 - +0.2 4,333,428 - -0.5 4,333,474 - MPMX20_04132 0.16 +2.8 4,333,483 - MPMX20_04132 0.18 +1.2 4,333,502 - MPMX20_04132 0.22 -0.8 4,333,626 + MPMX20_04132 0.47 +1.6 4,333,691 + MPMX20_04132 0.60 +0.7 4,333,692 + MPMX20_04132 0.60 -0.6 4,333,692 + MPMX20_04132 0.60 +0.3 4,333,692 + MPMX20_04132 0.60 +0.8 4,333,697 + MPMX20_04132 0.61 -1.1 4,333,700 - MPMX20_04132 0.62 -1.0 4,333,705 - MPMX20_04132 0.63 -0.5 4,333,788 - MPMX20_04132 0.79 +1.6 4,333,797 + MPMX20_04132 0.81 -0.6 4,333,838 - MPMX20_04132 0.89 -1.0 4,333,869 + -2.2 4,333,933 - +0.1 4,333,934 - -0.0 4,334,018 + MPMX20_04133 0.20 -2.1 4,334,025 - MPMX20_04133 0.21 -1.5 4,334,029 + MPMX20_04133 0.22 -2.5 4,334,029 + MPMX20_04133 0.22 -3.6 4,334,062 + MPMX20_04133 0.27 -1.9 4,334,190 - MPMX20_04133 0.47 -3.4 4,334,268 - MPMX20_04133 0.59 -0.2 4,334,296 - MPMX20_04133 0.64 -0.4 4,334,363 - MPMX20_04133 0.74 +0.2 4,334,449 + MPMX20_04133 0.87 -2.4 4,334,457 - MPMX20_04133 0.89 -3.9 4,334,457 - MPMX20_04133 0.89 +1.2 4,334,575 - +0.5 4,334,585 - -2.4 4,334,699 + +0.2 4,334,699 + +6.2 4,334,699 + +0.3 4,334,707 - +0.2 4,334,707 - -2.2
Or see this region's nucleotide sequence