Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04133

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04131 and MPMX20_04132 are separated by 379 nucleotidesMPMX20_04132 and MPMX20_04133 overlap by 1 nucleotidesMPMX20_04133 and MPMX20_04134 are separated by 312 nucleotidesMPMX20_04134 and MPMX20_04135 are separated by 15 nucleotides MPMX20_04131: MPMX20_04131 - Protein GltF, at 4,332,330 to 4,333,013 _04131 MPMX20_04132: MPMX20_04132 - Stringent starvation protein B, at 4,333,393 to 4,333,890 _04132 MPMX20_04133: MPMX20_04133 - Stringent starvation protein A, at 4,333,890 to 4,334,528 _04133 MPMX20_04134: MPMX20_04134 - 30S ribosomal protein S9, at 4,334,841 to 4,335,233 _04134 MPMX20_04135: MPMX20_04135 - 50S ribosomal protein L13, at 4,335,249 to 4,335,677 _04135 Position (kb) 4333 4334 4335Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5 6at 4332.891 kb on + strand, within MPMX20_04131at 4332.893 kb on + strand, within MPMX20_04131at 4332.896 kb on + strand, within MPMX20_04131at 4332.896 kb on - strand, within MPMX20_04131at 4332.901 kb on + strand, within MPMX20_04131at 4332.906 kb on + strand, within MPMX20_04131at 4332.906 kb on + strand, within MPMX20_04131at 4332.906 kb on + strand, within MPMX20_04131at 4332.906 kb on + strand, within MPMX20_04131at 4332.906 kb on + strand, within MPMX20_04131at 4332.906 kb on + strand, within MPMX20_04131at 4332.910 kb on + strand, within MPMX20_04131at 4332.910 kb on + strand, within MPMX20_04131at 4332.910 kb on + strand, within MPMX20_04131at 4332.910 kb on + strand, within MPMX20_04131at 4332.910 kb on + strand, within MPMX20_04131at 4332.910 kb on + strand, within MPMX20_04131at 4332.910 kb on + strand, within MPMX20_04131at 4332.910 kb on + strand, within MPMX20_04131at 4332.914 kb on - strand, within MPMX20_04131at 4332.914 kb on - strand, within MPMX20_04131at 4332.920 kb on + strand, within MPMX20_04131at 4332.924 kb on + strand, within MPMX20_04131at 4332.924 kb on + strand, within MPMX20_04131at 4332.924 kb on + strand, within MPMX20_04131at 4332.924 kb on + strand, within MPMX20_04131at 4332.925 kb on + strand, within MPMX20_04131at 4332.925 kb on + strand, within MPMX20_04131at 4332.925 kb on + strand, within MPMX20_04131at 4332.928 kb on - strand, within MPMX20_04131at 4332.933 kb on - strand, within MPMX20_04131at 4332.933 kb on - strand, within MPMX20_04131at 4332.933 kb on - strand, within MPMX20_04131at 4332.941 kb on + strand, within MPMX20_04131at 4332.943 kb on + strand, within MPMX20_04131at 4332.943 kb on + strand, within MPMX20_04131at 4332.943 kb on + strand, within MPMX20_04131at 4332.943 kb on + strand, within MPMX20_04131at 4332.943 kb on + strand, within MPMX20_04131at 4332.943 kb on + strand, within MPMX20_04131at 4332.943 kb on + strand, within MPMX20_04131at 4332.946 kb on + strandat 4332.950 kb on + strandat 4332.950 kb on + strandat 4332.951 kb on - strandat 4332.967 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.970 kb on + strandat 4332.972 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.974 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.976 kb on + strandat 4332.981 kb on + strandat 4332.981 kb on + strandat 4332.982 kb on - strandat 4332.984 kb on + strandat 4332.984 kb on + strandat 4332.984 kb on + strandat 4332.984 kb on + strandat 4332.984 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.986 kb on + strandat 4332.996 kb on + strandat 4332.997 kb on + strandat 4332.997 kb on + strandat 4333.015 kb on + strandat 4333.028 kb on + strandat 4333.096 kb on + strandat 4333.275 kb on - strandat 4333.275 kb on - strandat 4333.325 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.360 kb on - strandat 4333.401 kb on - strandat 4333.403 kb on - strandat 4333.403 kb on - strandat 4333.403 kb on - strandat 4333.410 kb on + strandat 4333.410 kb on + strandat 4333.413 kb on - strandat 4333.413 kb on - strandat 4333.413 kb on - strandat 4333.413 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.418 kb on - strandat 4333.420 kb on - strandat 4333.428 kb on - strandat 4333.428 kb on - strandat 4333.428 kb on - strandat 4333.428 kb on - strandat 4333.428 kb on - strandat 4333.428 kb on - strandat 4333.474 kb on - strand, within MPMX20_04132at 4333.483 kb on - strand, within MPMX20_04132at 4333.502 kb on - strand, within MPMX20_04132at 4333.626 kb on + strand, within MPMX20_04132at 4333.691 kb on + strand, within MPMX20_04132at 4333.692 kb on + strand, within MPMX20_04132at 4333.692 kb on + strand, within MPMX20_04132at 4333.692 kb on + strand, within MPMX20_04132at 4333.697 kb on + strand, within MPMX20_04132at 4333.700 kb on - strand, within MPMX20_04132at 4333.705 kb on - strand, within MPMX20_04132at 4333.788 kb on - strand, within MPMX20_04132at 4333.797 kb on + strand, within MPMX20_04132at 4333.838 kb on - strand, within MPMX20_04132at 4333.869 kb on + strandat 4333.933 kb on - strandat 4333.934 kb on - strandat 4334.018 kb on + strand, within MPMX20_04133at 4334.025 kb on - strand, within MPMX20_04133at 4334.029 kb on + strand, within MPMX20_04133at 4334.029 kb on + strand, within MPMX20_04133at 4334.062 kb on + strand, within MPMX20_04133at 4334.190 kb on - strand, within MPMX20_04133at 4334.268 kb on - strand, within MPMX20_04133at 4334.296 kb on - strand, within MPMX20_04133at 4334.363 kb on - strand, within MPMX20_04133at 4334.449 kb on + strand, within MPMX20_04133at 4334.457 kb on - strand, within MPMX20_04133at 4334.457 kb on - strand, within MPMX20_04133at 4334.575 kb on - strandat 4334.585 kb on - strandat 4334.699 kb on + strandat 4334.699 kb on + strandat 4334.699 kb on + strandat 4334.707 kb on - strandat 4334.707 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,332,891 + MPMX20_04131 0.82 -1.1
4,332,893 + MPMX20_04131 0.82 -1.7
4,332,896 + MPMX20_04131 0.83 -0.0
4,332,896 - MPMX20_04131 0.83 +2.8
4,332,901 + MPMX20_04131 0.83 -0.0
4,332,906 + MPMX20_04131 0.84 +0.8
4,332,906 + MPMX20_04131 0.84 +1.0
4,332,906 + MPMX20_04131 0.84 -1.0
4,332,906 + MPMX20_04131 0.84 -0.1
4,332,906 + MPMX20_04131 0.84 +0.5
4,332,906 + MPMX20_04131 0.84 +0.3
4,332,910 + MPMX20_04131 0.85 -0.7
4,332,910 + MPMX20_04131 0.85 -1.0
4,332,910 + MPMX20_04131 0.85 -1.5
4,332,910 + MPMX20_04131 0.85 -0.7
4,332,910 + MPMX20_04131 0.85 +0.1
4,332,910 + MPMX20_04131 0.85 +1.8
4,332,910 + MPMX20_04131 0.85 -2.2
4,332,910 + MPMX20_04131 0.85 -0.8
4,332,914 - MPMX20_04131 0.85 -0.9
4,332,914 - MPMX20_04131 0.85 +0.8
4,332,920 + MPMX20_04131 0.86 +0.5
4,332,924 + MPMX20_04131 0.87 +0.8
4,332,924 + MPMX20_04131 0.87 -1.2
4,332,924 + MPMX20_04131 0.87 -0.4
4,332,924 + MPMX20_04131 0.87 -0.8
4,332,925 + MPMX20_04131 0.87 -1.2
4,332,925 + MPMX20_04131 0.87 +0.5
4,332,925 + MPMX20_04131 0.87 +0.4
4,332,928 - MPMX20_04131 0.87 +0.2
4,332,933 - MPMX20_04131 0.88 +2.8
4,332,933 - MPMX20_04131 0.88 -0.0
4,332,933 - MPMX20_04131 0.88 +1.2
4,332,941 + MPMX20_04131 0.89 +0.3
4,332,943 + MPMX20_04131 0.90 +0.2
4,332,943 + MPMX20_04131 0.90 -0.9
4,332,943 + MPMX20_04131 0.90 -0.5
4,332,943 + MPMX20_04131 0.90 -0.2
4,332,943 + MPMX20_04131 0.90 +0.6
4,332,943 + MPMX20_04131 0.90 -0.2
4,332,943 + MPMX20_04131 0.90 -1.0
4,332,946 + +0.1
4,332,950 + -0.0
4,332,950 + -0.6
4,332,951 - +2.8
4,332,967 + -0.0
4,332,970 + +1.8
4,332,970 + -0.1
4,332,970 + +4.1
4,332,970 + -0.2
4,332,970 + +1.8
4,332,970 + +0.5
4,332,970 + +2.8
4,332,970 + -1.4
4,332,970 + -2.0
4,332,970 + -1.0
4,332,970 + -1.3
4,332,970 + -1.3
4,332,970 + -0.6
4,332,970 + +0.2
4,332,970 + +0.8
4,332,970 + +1.5
4,332,970 + +0.3
4,332,970 + -0.9
4,332,970 + -0.0
4,332,970 + -1.5
4,332,970 + +1.0
4,332,972 + +0.2
4,332,974 + -0.3
4,332,974 + +1.2
4,332,974 + -0.2
4,332,974 + +0.5
4,332,974 + -0.6
4,332,974 + +1.0
4,332,974 + -1.3
4,332,974 + -0.6
4,332,974 + +2.8
4,332,974 + -2.1
4,332,974 + -0.6
4,332,976 + +0.2
4,332,976 + +0.7
4,332,976 + +1.2
4,332,976 + +1.6
4,332,976 + -0.2
4,332,976 + +1.8
4,332,976 + -0.5
4,332,976 + +1.6
4,332,976 + +0.8
4,332,976 + -1.3
4,332,976 + -0.8
4,332,976 + -1.7
4,332,976 + -0.2
4,332,976 + -0.5
4,332,976 + +0.2
4,332,976 + -1.8
4,332,976 + -0.3
4,332,976 + +0.0
4,332,976 + -0.8
4,332,976 + -0.0
4,332,976 + -0.8
4,332,976 + +0.5
4,332,981 + +0.5
4,332,981 + -0.3
4,332,982 - +0.5
4,332,984 + -0.0
4,332,984 + -1.2
4,332,984 + +1.8
4,332,984 + +1.2
4,332,984 + -0.9
4,332,986 + -0.4
4,332,986 + +0.1
4,332,986 + -1.0
4,332,986 + -0.3
4,332,986 + +0.8
4,332,986 + +0.6
4,332,986 + +0.1
4,332,986 + +2.8
4,332,986 + -0.0
4,332,986 + +2.8
4,332,986 + -1.9
4,332,986 + -0.7
4,332,986 + +0.8
4,332,986 + -2.2
4,332,986 + -0.7
4,332,986 + +2.8
4,332,986 + -0.4
4,332,996 + +1.4
4,332,997 + +0.0
4,332,997 + +0.6
4,333,015 + +0.6
4,333,028 + -1.5
4,333,096 + +0.5
4,333,275 - +0.5
4,333,275 - +2.8
4,333,325 - +0.2
4,333,360 - +0.3
4,333,360 - -0.7
4,333,360 - +0.2
4,333,360 - +0.2
4,333,360 - -1.1
4,333,360 - +0.5
4,333,360 - -0.0
4,333,360 - -2.6
4,333,360 - -0.6
4,333,360 - +0.5
4,333,360 - -0.8
4,333,360 - +0.3
4,333,360 - -0.5
4,333,360 - -1.1
4,333,360 - -1.6
4,333,360 - -1.6
4,333,401 - -1.4
4,333,403 - -0.7
4,333,403 - +0.1
4,333,403 - -1.4
4,333,410 + +1.2
4,333,410 + +2.2
4,333,413 - -0.5
4,333,413 - -0.0
4,333,413 - +2.8
4,333,413 - -2.0
4,333,418 - +0.6
4,333,418 - +0.2
4,333,418 - +1.2
4,333,418 - -0.0
4,333,418 - +1.5
4,333,418 - -0.7
4,333,418 - +0.1
4,333,418 - +0.9
4,333,418 - -0.7
4,333,418 - -0.0
4,333,418 - -0.7
4,333,418 - +1.0
4,333,418 - +0.3
4,333,418 - -0.9
4,333,418 - -0.3
4,333,418 - +6.5
4,333,418 - -1.1
4,333,418 - +1.2
4,333,418 - -0.5
4,333,418 - -0.2
4,333,418 - +2.5
4,333,418 - +0.2
4,333,418 - -0.9
4,333,418 - +2.2
4,333,418 - -0.0
4,333,418 - -0.3
4,333,418 - -1.4
4,333,418 - +1.8
4,333,418 - -1.5
4,333,418 - -1.2
4,333,418 - -0.5
4,333,418 - +0.0
4,333,418 - +0.4
4,333,418 - +0.3
4,333,418 - +1.0
4,333,418 - -0.3
4,333,418 - -0.2
4,333,418 - +0.5
4,333,418 - +2.8
4,333,418 - +0.6
4,333,418 - +0.8
4,333,418 - -0.3
4,333,418 - +1.5
4,333,418 - -0.7
4,333,418 - -1.3
4,333,418 - -0.0
4,333,418 - -0.5
4,333,418 - -0.0
4,333,418 - -0.4
4,333,418 - +1.3
4,333,418 - -0.8
4,333,418 - +1.0
4,333,418 - -1.0
4,333,418 - -1.1
4,333,418 - -1.7
4,333,418 - -0.9
4,333,418 - +0.3
4,333,418 - -0.8
4,333,418 - +1.3
4,333,418 - -0.5
4,333,418 - -1.2
4,333,418 - -1.2
4,333,418 - -1.2
4,333,418 - +1.5
4,333,418 - -1.5
4,333,418 - -0.9
4,333,418 - -1.0
4,333,418 - +1.7
4,333,418 - -0.6
4,333,418 - -0.5
4,333,418 - -0.8
4,333,418 - +0.8
4,333,418 - +1.0
4,333,418 - -0.1
4,333,418 - -0.5
4,333,418 - -0.1
4,333,418 - -0.5
4,333,418 - +0.5
4,333,420 - +0.2
4,333,428 - -0.0
4,333,428 - -0.3
4,333,428 - +0.3
4,333,428 - -0.3
4,333,428 - +0.2
4,333,428 - -0.5
4,333,474 - MPMX20_04132 0.16 +2.8
4,333,483 - MPMX20_04132 0.18 +1.2
4,333,502 - MPMX20_04132 0.22 -0.8
4,333,626 + MPMX20_04132 0.47 +1.6
4,333,691 + MPMX20_04132 0.60 +0.7
4,333,692 + MPMX20_04132 0.60 -0.6
4,333,692 + MPMX20_04132 0.60 +0.3
4,333,692 + MPMX20_04132 0.60 +0.8
4,333,697 + MPMX20_04132 0.61 -1.1
4,333,700 - MPMX20_04132 0.62 -1.0
4,333,705 - MPMX20_04132 0.63 -0.5
4,333,788 - MPMX20_04132 0.79 +1.6
4,333,797 + MPMX20_04132 0.81 -0.6
4,333,838 - MPMX20_04132 0.89 -1.0
4,333,869 + -2.2
4,333,933 - +0.1
4,333,934 - -0.0
4,334,018 + MPMX20_04133 0.20 -2.1
4,334,025 - MPMX20_04133 0.21 -1.5
4,334,029 + MPMX20_04133 0.22 -2.5
4,334,029 + MPMX20_04133 0.22 -3.6
4,334,062 + MPMX20_04133 0.27 -1.9
4,334,190 - MPMX20_04133 0.47 -3.4
4,334,268 - MPMX20_04133 0.59 -0.2
4,334,296 - MPMX20_04133 0.64 -0.4
4,334,363 - MPMX20_04133 0.74 +0.2
4,334,449 + MPMX20_04133 0.87 -2.4
4,334,457 - MPMX20_04133 0.89 -3.9
4,334,457 - MPMX20_04133 0.89 +1.2
4,334,575 - +0.5
4,334,585 - -2.4
4,334,699 + +0.2
4,334,699 + +6.2
4,334,699 + +0.3
4,334,707 - +0.2
4,334,707 - -2.2

Or see this region's nucleotide sequence