Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04097 and MPMX20_04098 overlap by 1 nucleotides MPMX20_04098 and MPMX20_04099 are separated by 18 nucleotides MPMX20_04099 and MPMX20_04100 are separated by 4 nucleotides MPMX20_04100 and MPMX20_04101 are separated by 7 nucleotides
MPMX20_04097: MPMX20_04097 - Intermembrane phospholipid transport system binding protein MlaB, at 4,293,080 to 4,293,373
_04097
MPMX20_04098: MPMX20_04098 - Intermembrane phospholipid transport system binding protein MlaC, at 4,293,373 to 4,294,008
_04098
MPMX20_04099: MPMX20_04099 - Intermembrane phospholipid transport system binding protein MlaD, at 4,294,027 to 4,294,575
_04099
MPMX20_04100: MPMX20_04100 - Intermembrane phospholipid transport system permease protein MlaE, at 4,294,580 to 4,295,362
_04100
MPMX20_04101: MPMX20_04101 - Intermembrane phospholipid transport system ATP-binding protein MlaF, at 4,295,370 to 4,296,182
_04101
Position (kb)
4294
4295 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4293.116 kb on - strand, within MPMX20_04097 at 4293.126 kb on - strand, within MPMX20_04097 at 4293.126 kb on - strand, within MPMX20_04097 at 4293.149 kb on + strand, within MPMX20_04097 at 4293.154 kb on + strand, within MPMX20_04097 at 4293.154 kb on + strand, within MPMX20_04097 at 4293.162 kb on - strand, within MPMX20_04097 at 4293.168 kb on - strand, within MPMX20_04097 at 4293.180 kb on - strand, within MPMX20_04097 at 4293.186 kb on + strand, within MPMX20_04097 at 4293.312 kb on - strand, within MPMX20_04097 at 4293.346 kb on + strand at 4293.364 kb on - strand at 4293.458 kb on + strand, within MPMX20_04098 at 4293.477 kb on + strand, within MPMX20_04098 at 4293.477 kb on + strand, within MPMX20_04098 at 4293.477 kb on + strand, within MPMX20_04098 at 4293.485 kb on - strand, within MPMX20_04098 at 4293.562 kb on + strand, within MPMX20_04098 at 4293.584 kb on - strand, within MPMX20_04098 at 4293.610 kb on + strand, within MPMX20_04098 at 4293.668 kb on + strand, within MPMX20_04098 at 4293.668 kb on + strand, within MPMX20_04098 at 4293.676 kb on - strand, within MPMX20_04098 at 4293.744 kb on + strand, within MPMX20_04098 at 4293.780 kb on - strand, within MPMX20_04098 at 4293.817 kb on - strand, within MPMX20_04098 at 4293.819 kb on + strand, within MPMX20_04098 at 4293.916 kb on - strand, within MPMX20_04098 at 4293.923 kb on + strand, within MPMX20_04098 at 4293.947 kb on - strand at 4293.959 kb on - strand at 4293.976 kb on - strand at 4294.068 kb on - strand at 4294.077 kb on + strand at 4294.117 kb on - strand, within MPMX20_04099 at 4294.117 kb on - strand, within MPMX20_04099 at 4294.144 kb on + strand, within MPMX20_04099 at 4294.173 kb on + strand, within MPMX20_04099 at 4294.187 kb on + strand, within MPMX20_04099 at 4294.194 kb on + strand, within MPMX20_04099 at 4294.218 kb on - strand, within MPMX20_04099 at 4294.330 kb on - strand, within MPMX20_04099 at 4294.378 kb on + strand, within MPMX20_04099 at 4294.391 kb on + strand, within MPMX20_04099 at 4294.502 kb on - strand, within MPMX20_04099 at 4294.631 kb on - strand at 4294.631 kb on - strand at 4294.648 kb on - strand at 4294.667 kb on + strand, within MPMX20_04100 at 4294.726 kb on + strand, within MPMX20_04100 at 4294.754 kb on - strand, within MPMX20_04100 at 4294.766 kb on - strand, within MPMX20_04100 at 4294.766 kb on - strand, within MPMX20_04100 at 4294.793 kb on + strand, within MPMX20_04100 at 4294.801 kb on - strand, within MPMX20_04100 at 4294.816 kb on - strand, within MPMX20_04100 at 4294.827 kb on + strand, within MPMX20_04100 at 4294.997 kb on - strand, within MPMX20_04100 at 4295.037 kb on + strand, within MPMX20_04100 at 4295.045 kb on - strand, within MPMX20_04100 at 4295.150 kb on + strand, within MPMX20_04100 at 4295.219 kb on - strand, within MPMX20_04100 at 4295.274 kb on + strand, within MPMX20_04100 at 4295.282 kb on - strand, within MPMX20_04100 at 4295.316 kb on - strand at 4295.332 kb on + strand at 4295.332 kb on + strand at 4295.332 kb on + strand at 4295.338 kb on - strand at 4295.376 kb on - strand at 4295.376 kb on - strand at 4295.426 kb on + strand at 4295.426 kb on + strand at 4295.434 kb on - strand at 4295.434 kb on - strand at 4295.434 kb on - strand at 4295.457 kb on + strand, within MPMX20_04101 at 4295.527 kb on + strand, within MPMX20_04101
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,293,116 - MPMX20_04097 0.12 -0.7 4,293,126 - MPMX20_04097 0.16 -2.4 4,293,126 - MPMX20_04097 0.16 -0.9 4,293,149 + MPMX20_04097 0.23 -0.8 4,293,154 + MPMX20_04097 0.25 -0.9 4,293,154 + MPMX20_04097 0.25 +0.8 4,293,162 - MPMX20_04097 0.28 -1.4 4,293,168 - MPMX20_04097 0.30 +0.8 4,293,180 - MPMX20_04097 0.34 +0.2 4,293,186 + MPMX20_04097 0.36 -0.7 4,293,312 - MPMX20_04097 0.79 -0.1 4,293,346 + -0.2 4,293,364 - +1.2 4,293,458 + MPMX20_04098 0.13 +1.4 4,293,477 + MPMX20_04098 0.16 -1.3 4,293,477 + MPMX20_04098 0.16 -2.1 4,293,477 + MPMX20_04098 0.16 -0.6 4,293,485 - MPMX20_04098 0.18 -0.4 4,293,562 + MPMX20_04098 0.30 +0.0 4,293,584 - MPMX20_04098 0.33 -0.9 4,293,610 + MPMX20_04098 0.37 +1.4 4,293,668 + MPMX20_04098 0.46 +0.0 4,293,668 + MPMX20_04098 0.46 +0.1 4,293,676 - MPMX20_04098 0.48 -0.1 4,293,744 + MPMX20_04098 0.58 +0.2 4,293,780 - MPMX20_04098 0.64 +1.2 4,293,817 - MPMX20_04098 0.70 +1.0 4,293,819 + MPMX20_04098 0.70 -0.0 4,293,916 - MPMX20_04098 0.85 +0.4 4,293,923 + MPMX20_04098 0.86 -1.6 4,293,947 - +0.4 4,293,959 - -0.3 4,293,976 - +0.8 4,294,068 - -1.1 4,294,077 + -0.7 4,294,117 - MPMX20_04099 0.16 +1.0 4,294,117 - MPMX20_04099 0.16 -0.6 4,294,144 + MPMX20_04099 0.21 -1.0 4,294,173 + MPMX20_04099 0.27 -0.0 4,294,187 + MPMX20_04099 0.29 -0.9 4,294,194 + MPMX20_04099 0.30 -1.0 4,294,218 - MPMX20_04099 0.35 -0.9 4,294,330 - MPMX20_04099 0.55 +0.8 4,294,378 + MPMX20_04099 0.64 -0.4 4,294,391 + MPMX20_04099 0.66 -0.7 4,294,502 - MPMX20_04099 0.87 +0.2 4,294,631 - -0.4 4,294,631 - +0.1 4,294,648 - -2.0 4,294,667 + MPMX20_04100 0.11 +1.8 4,294,726 + MPMX20_04100 0.19 -0.6 4,294,754 - MPMX20_04100 0.22 -2.5 4,294,766 - MPMX20_04100 0.24 +0.4 4,294,766 - MPMX20_04100 0.24 -0.1 4,294,793 + MPMX20_04100 0.27 -0.4 4,294,801 - MPMX20_04100 0.28 -1.3 4,294,816 - MPMX20_04100 0.30 +1.8 4,294,827 + MPMX20_04100 0.32 -2.8 4,294,997 - MPMX20_04100 0.53 -1.4 4,295,037 + MPMX20_04100 0.58 +0.2 4,295,045 - MPMX20_04100 0.59 -1.2 4,295,150 + MPMX20_04100 0.73 -1.0 4,295,219 - MPMX20_04100 0.82 +3.5 4,295,274 + MPMX20_04100 0.89 -1.5 4,295,282 - MPMX20_04100 0.90 -1.4 4,295,316 - -1.7 4,295,332 + -0.6 4,295,332 + -2.0 4,295,332 + +0.8 4,295,338 - -1.0 4,295,376 - -1.4 4,295,376 - +0.8 4,295,426 + +1.3 4,295,426 + -0.6 4,295,434 - -1.6 4,295,434 - -0.5 4,295,434 - +1.8 4,295,457 + MPMX20_04101 0.11 +0.6 4,295,527 + MPMX20_04101 0.19 -0.1
Or see this region's nucleotide sequence