Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04099

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04097 and MPMX20_04098 overlap by 1 nucleotidesMPMX20_04098 and MPMX20_04099 are separated by 18 nucleotidesMPMX20_04099 and MPMX20_04100 are separated by 4 nucleotidesMPMX20_04100 and MPMX20_04101 are separated by 7 nucleotides MPMX20_04097: MPMX20_04097 - Intermembrane phospholipid transport system binding protein MlaB, at 4,293,080 to 4,293,373 _04097 MPMX20_04098: MPMX20_04098 - Intermembrane phospholipid transport system binding protein MlaC, at 4,293,373 to 4,294,008 _04098 MPMX20_04099: MPMX20_04099 - Intermembrane phospholipid transport system binding protein MlaD, at 4,294,027 to 4,294,575 _04099 MPMX20_04100: MPMX20_04100 - Intermembrane phospholipid transport system permease protein MlaE, at 4,294,580 to 4,295,362 _04100 MPMX20_04101: MPMX20_04101 - Intermembrane phospholipid transport system ATP-binding protein MlaF, at 4,295,370 to 4,296,182 _04101 Position (kb) 4294 4295Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4293.116 kb on - strand, within MPMX20_04097at 4293.126 kb on - strand, within MPMX20_04097at 4293.126 kb on - strand, within MPMX20_04097at 4293.149 kb on + strand, within MPMX20_04097at 4293.154 kb on + strand, within MPMX20_04097at 4293.154 kb on + strand, within MPMX20_04097at 4293.162 kb on - strand, within MPMX20_04097at 4293.168 kb on - strand, within MPMX20_04097at 4293.180 kb on - strand, within MPMX20_04097at 4293.186 kb on + strand, within MPMX20_04097at 4293.312 kb on - strand, within MPMX20_04097at 4293.346 kb on + strandat 4293.364 kb on - strandat 4293.458 kb on + strand, within MPMX20_04098at 4293.477 kb on + strand, within MPMX20_04098at 4293.477 kb on + strand, within MPMX20_04098at 4293.477 kb on + strand, within MPMX20_04098at 4293.485 kb on - strand, within MPMX20_04098at 4293.562 kb on + strand, within MPMX20_04098at 4293.584 kb on - strand, within MPMX20_04098at 4293.610 kb on + strand, within MPMX20_04098at 4293.668 kb on + strand, within MPMX20_04098at 4293.668 kb on + strand, within MPMX20_04098at 4293.676 kb on - strand, within MPMX20_04098at 4293.744 kb on + strand, within MPMX20_04098at 4293.780 kb on - strand, within MPMX20_04098at 4293.817 kb on - strand, within MPMX20_04098at 4293.819 kb on + strand, within MPMX20_04098at 4293.916 kb on - strand, within MPMX20_04098at 4293.923 kb on + strand, within MPMX20_04098at 4293.947 kb on - strandat 4293.959 kb on - strandat 4293.976 kb on - strandat 4294.068 kb on - strandat 4294.077 kb on + strandat 4294.117 kb on - strand, within MPMX20_04099at 4294.117 kb on - strand, within MPMX20_04099at 4294.144 kb on + strand, within MPMX20_04099at 4294.173 kb on + strand, within MPMX20_04099at 4294.187 kb on + strand, within MPMX20_04099at 4294.194 kb on + strand, within MPMX20_04099at 4294.218 kb on - strand, within MPMX20_04099at 4294.330 kb on - strand, within MPMX20_04099at 4294.378 kb on + strand, within MPMX20_04099at 4294.391 kb on + strand, within MPMX20_04099at 4294.502 kb on - strand, within MPMX20_04099at 4294.631 kb on - strandat 4294.631 kb on - strandat 4294.648 kb on - strandat 4294.667 kb on + strand, within MPMX20_04100at 4294.726 kb on + strand, within MPMX20_04100at 4294.754 kb on - strand, within MPMX20_04100at 4294.766 kb on - strand, within MPMX20_04100at 4294.766 kb on - strand, within MPMX20_04100at 4294.793 kb on + strand, within MPMX20_04100at 4294.801 kb on - strand, within MPMX20_04100at 4294.816 kb on - strand, within MPMX20_04100at 4294.827 kb on + strand, within MPMX20_04100at 4294.997 kb on - strand, within MPMX20_04100at 4295.037 kb on + strand, within MPMX20_04100at 4295.045 kb on - strand, within MPMX20_04100at 4295.150 kb on + strand, within MPMX20_04100at 4295.219 kb on - strand, within MPMX20_04100at 4295.274 kb on + strand, within MPMX20_04100at 4295.282 kb on - strand, within MPMX20_04100at 4295.316 kb on - strandat 4295.332 kb on + strandat 4295.332 kb on + strandat 4295.332 kb on + strandat 4295.338 kb on - strandat 4295.376 kb on - strandat 4295.376 kb on - strandat 4295.426 kb on + strandat 4295.426 kb on + strandat 4295.434 kb on - strandat 4295.434 kb on - strandat 4295.434 kb on - strandat 4295.457 kb on + strand, within MPMX20_04101at 4295.527 kb on + strand, within MPMX20_04101

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,293,116 - MPMX20_04097 0.12 -0.7
4,293,126 - MPMX20_04097 0.16 -2.4
4,293,126 - MPMX20_04097 0.16 -0.9
4,293,149 + MPMX20_04097 0.23 -0.8
4,293,154 + MPMX20_04097 0.25 -0.9
4,293,154 + MPMX20_04097 0.25 +0.8
4,293,162 - MPMX20_04097 0.28 -1.4
4,293,168 - MPMX20_04097 0.30 +0.8
4,293,180 - MPMX20_04097 0.34 +0.2
4,293,186 + MPMX20_04097 0.36 -0.7
4,293,312 - MPMX20_04097 0.79 -0.1
4,293,346 + -0.2
4,293,364 - +1.2
4,293,458 + MPMX20_04098 0.13 +1.4
4,293,477 + MPMX20_04098 0.16 -1.3
4,293,477 + MPMX20_04098 0.16 -2.1
4,293,477 + MPMX20_04098 0.16 -0.6
4,293,485 - MPMX20_04098 0.18 -0.4
4,293,562 + MPMX20_04098 0.30 +0.0
4,293,584 - MPMX20_04098 0.33 -0.9
4,293,610 + MPMX20_04098 0.37 +1.4
4,293,668 + MPMX20_04098 0.46 +0.0
4,293,668 + MPMX20_04098 0.46 +0.1
4,293,676 - MPMX20_04098 0.48 -0.1
4,293,744 + MPMX20_04098 0.58 +0.2
4,293,780 - MPMX20_04098 0.64 +1.2
4,293,817 - MPMX20_04098 0.70 +1.0
4,293,819 + MPMX20_04098 0.70 -0.0
4,293,916 - MPMX20_04098 0.85 +0.4
4,293,923 + MPMX20_04098 0.86 -1.6
4,293,947 - +0.4
4,293,959 - -0.3
4,293,976 - +0.8
4,294,068 - -1.1
4,294,077 + -0.7
4,294,117 - MPMX20_04099 0.16 +1.0
4,294,117 - MPMX20_04099 0.16 -0.6
4,294,144 + MPMX20_04099 0.21 -1.0
4,294,173 + MPMX20_04099 0.27 -0.0
4,294,187 + MPMX20_04099 0.29 -0.9
4,294,194 + MPMX20_04099 0.30 -1.0
4,294,218 - MPMX20_04099 0.35 -0.9
4,294,330 - MPMX20_04099 0.55 +0.8
4,294,378 + MPMX20_04099 0.64 -0.4
4,294,391 + MPMX20_04099 0.66 -0.7
4,294,502 - MPMX20_04099 0.87 +0.2
4,294,631 - -0.4
4,294,631 - +0.1
4,294,648 - -2.0
4,294,667 + MPMX20_04100 0.11 +1.8
4,294,726 + MPMX20_04100 0.19 -0.6
4,294,754 - MPMX20_04100 0.22 -2.5
4,294,766 - MPMX20_04100 0.24 +0.4
4,294,766 - MPMX20_04100 0.24 -0.1
4,294,793 + MPMX20_04100 0.27 -0.4
4,294,801 - MPMX20_04100 0.28 -1.3
4,294,816 - MPMX20_04100 0.30 +1.8
4,294,827 + MPMX20_04100 0.32 -2.8
4,294,997 - MPMX20_04100 0.53 -1.4
4,295,037 + MPMX20_04100 0.58 +0.2
4,295,045 - MPMX20_04100 0.59 -1.2
4,295,150 + MPMX20_04100 0.73 -1.0
4,295,219 - MPMX20_04100 0.82 +3.5
4,295,274 + MPMX20_04100 0.89 -1.5
4,295,282 - MPMX20_04100 0.90 -1.4
4,295,316 - -1.7
4,295,332 + -0.6
4,295,332 + -2.0
4,295,332 + +0.8
4,295,338 - -1.0
4,295,376 - -1.4
4,295,376 - +0.8
4,295,426 + +1.3
4,295,426 + -0.6
4,295,434 - -1.6
4,295,434 - -0.5
4,295,434 - +1.8
4,295,457 + MPMX20_04101 0.11 +0.6
4,295,527 + MPMX20_04101 0.19 -0.1

Or see this region's nucleotide sequence