Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03880 and MPMX20_03881 overlap by 4 nucleotides MPMX20_03881 and MPMX20_03882 are separated by 204 nucleotides MPMX20_03882 and MPMX20_03883 are separated by 190 nucleotides MPMX20_03883 and MPMX20_03884 are separated by 2 nucleotides
MPMX20_03880: MPMX20_03880 - hypothetical protein, at 4,089,568 to 4,089,990
_03880
MPMX20_03881: MPMX20_03881 - ADP-ribose pyrophosphatase, at 4,089,987 to 4,090,619
_03881
MPMX20_03882: MPMX20_03882 - Outer membrane protein TolC, at 4,090,824 to 4,092,302
_03882
MPMX20_03883: MPMX20_03883 - hypothetical protein, at 4,092,493 to 4,093,158
_03883
MPMX20_03884: MPMX20_03884 - Putative acid--amine ligase YgiC, at 4,093,161 to 4,094,321
_03884
Position (kb)
4090
4091
4092
4093 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4089.827 kb on - strand, within MPMX20_03880 at 4089.827 kb on - strand, within MPMX20_03880 at 4089.827 kb on - strand, within MPMX20_03880 at 4089.827 kb on - strand, within MPMX20_03880 at 4089.873 kb on + strand, within MPMX20_03880 at 4089.873 kb on + strand, within MPMX20_03880 at 4089.881 kb on - strand, within MPMX20_03880 at 4089.977 kb on + strand at 4089.982 kb on - strand at 4089.982 kb on - strand at 4090.025 kb on + strand at 4090.095 kb on - strand, within MPMX20_03881 at 4090.097 kb on + strand, within MPMX20_03881 at 4090.105 kb on - strand, within MPMX20_03881 at 4090.105 kb on - strand, within MPMX20_03881 at 4090.105 kb on - strand, within MPMX20_03881 at 4090.197 kb on - strand, within MPMX20_03881 at 4090.259 kb on + strand, within MPMX20_03881 at 4090.319 kb on + strand, within MPMX20_03881 at 4090.381 kb on + strand, within MPMX20_03881 at 4090.429 kb on - strand, within MPMX20_03881 at 4090.429 kb on - strand, within MPMX20_03881 at 4090.430 kb on + strand, within MPMX20_03881 at 4090.502 kb on + strand, within MPMX20_03881 at 4090.622 kb on + strand at 4090.622 kb on + strand at 4090.630 kb on - strand at 4090.680 kb on + strand at 4090.680 kb on + strand at 4090.688 kb on + strand at 4090.689 kb on - strand at 4090.738 kb on + strand at 4090.792 kb on + strand at 4090.792 kb on + strand at 4090.792 kb on + strand at 4090.804 kb on + strand at 4090.838 kb on + strand at 4090.852 kb on + strand at 4090.852 kb on + strand at 4090.852 kb on + strand at 4090.859 kb on - strand at 4090.860 kb on - strand at 4090.860 kb on - strand at 4090.860 kb on - strand at 4090.920 kb on + strand at 4090.920 kb on + strand at 4090.920 kb on + strand at 4090.920 kb on + strand at 4090.925 kb on + strand at 4090.928 kb on - strand at 4090.928 kb on - strand at 4090.928 kb on - strand at 4090.933 kb on - strand at 4090.979 kb on + strand, within MPMX20_03882 at 4090.979 kb on + strand, within MPMX20_03882 at 4090.987 kb on - strand, within MPMX20_03882 at 4091.004 kb on - strand, within MPMX20_03882 at 4091.012 kb on - strand, within MPMX20_03882 at 4091.018 kb on - strand, within MPMX20_03882 at 4091.020 kb on - strand, within MPMX20_03882 at 4091.023 kb on + strand, within MPMX20_03882 at 4091.028 kb on + strand, within MPMX20_03882 at 4091.036 kb on - strand, within MPMX20_03882 at 4091.047 kb on - strand, within MPMX20_03882 at 4091.057 kb on + strand, within MPMX20_03882 at 4091.136 kb on + strand, within MPMX20_03882 at 4091.144 kb on - strand, within MPMX20_03882 at 4091.145 kb on - strand, within MPMX20_03882 at 4091.145 kb on - strand, within MPMX20_03882 at 4091.145 kb on - strand, within MPMX20_03882 at 4091.145 kb on - strand, within MPMX20_03882 at 4091.163 kb on + strand, within MPMX20_03882 at 4091.258 kb on + strand, within MPMX20_03882 at 4091.258 kb on + strand, within MPMX20_03882 at 4091.258 kb on + strand, within MPMX20_03882 at 4091.266 kb on - strand, within MPMX20_03882 at 4091.266 kb on - strand, within MPMX20_03882 at 4091.349 kb on - strand, within MPMX20_03882 at 4091.367 kb on + strand, within MPMX20_03882 at 4091.375 kb on - strand, within MPMX20_03882 at 4091.453 kb on + strand, within MPMX20_03882 at 4091.458 kb on + strand, within MPMX20_03882 at 4091.461 kb on - strand, within MPMX20_03882 at 4091.518 kb on + strand, within MPMX20_03882 at 4091.629 kb on + strand, within MPMX20_03882 at 4091.637 kb on - strand, within MPMX20_03882 at 4091.637 kb on - strand, within MPMX20_03882 at 4091.637 kb on - strand, within MPMX20_03882 at 4091.657 kb on + strand, within MPMX20_03882 at 4091.692 kb on + strand, within MPMX20_03882 at 4091.718 kb on + strand, within MPMX20_03882 at 4091.726 kb on - strand, within MPMX20_03882 at 4091.726 kb on - strand, within MPMX20_03882 at 4091.733 kb on + strand, within MPMX20_03882 at 4091.733 kb on + strand, within MPMX20_03882 at 4091.756 kb on + strand, within MPMX20_03882 at 4091.804 kb on - strand, within MPMX20_03882 at 4091.806 kb on - strand, within MPMX20_03882 at 4091.828 kb on + strand, within MPMX20_03882 at 4091.833 kb on - strand, within MPMX20_03882 at 4091.858 kb on - strand, within MPMX20_03882 at 4091.908 kb on - strand, within MPMX20_03882 at 4091.941 kb on + strand, within MPMX20_03882 at 4091.946 kb on - strand, within MPMX20_03882 at 4091.949 kb on - strand, within MPMX20_03882 at 4092.015 kb on - strand, within MPMX20_03882 at 4092.025 kb on - strand, within MPMX20_03882 at 4092.137 kb on + strand, within MPMX20_03882 at 4092.145 kb on - strand, within MPMX20_03882 at 4092.145 kb on - strand, within MPMX20_03882 at 4092.191 kb on + strand at 4092.209 kb on + strand at 4092.217 kb on - strand at 4092.223 kb on + strand at 4092.223 kb on + strand at 4092.231 kb on - strand at 4092.231 kb on - strand at 4092.332 kb on - strand at 4092.351 kb on + strand at 4092.352 kb on - strand at 4092.359 kb on - strand at 4092.374 kb on + strand at 4092.374 kb on + strand at 4092.386 kb on + strand at 4092.386 kb on + strand at 4092.421 kb on + strand at 4092.452 kb on - strand at 4092.452 kb on - strand at 4092.462 kb on - strand at 4092.565 kb on - strand, within MPMX20_03883 at 4092.565 kb on - strand, within MPMX20_03883 at 4092.581 kb on - strand, within MPMX20_03883 at 4092.645 kb on + strand, within MPMX20_03883 at 4092.645 kb on + strand, within MPMX20_03883 at 4092.653 kb on - strand, within MPMX20_03883 at 4092.658 kb on - strand, within MPMX20_03883 at 4092.678 kb on + strand, within MPMX20_03883 at 4092.678 kb on + strand, within MPMX20_03883 at 4092.678 kb on + strand, within MPMX20_03883 at 4092.678 kb on + strand, within MPMX20_03883 at 4092.678 kb on + strand, within MPMX20_03883 at 4092.686 kb on - strand, within MPMX20_03883 at 4092.686 kb on - strand, within MPMX20_03883 at 4092.701 kb on + strand, within MPMX20_03883 at 4092.742 kb on + strand, within MPMX20_03883 at 4092.742 kb on + strand, within MPMX20_03883 at 4092.750 kb on - strand, within MPMX20_03883 at 4092.752 kb on + strand, within MPMX20_03883 at 4092.772 kb on + strand, within MPMX20_03883 at 4093.001 kb on + strand, within MPMX20_03883 at 4093.009 kb on - strand, within MPMX20_03883 at 4093.064 kb on + strand, within MPMX20_03883 at 4093.079 kb on + strand, within MPMX20_03883 at 4093.107 kb on - strand at 4093.107 kb on - strand at 4093.141 kb on - strand at 4093.219 kb on + strand at 4093.285 kb on - strand, within MPMX20_03884 at 4093.290 kb on - strand, within MPMX20_03884
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,089,827 - MPMX20_03880 0.61 -0.1 4,089,827 - MPMX20_03880 0.61 -0.0 4,089,827 - MPMX20_03880 0.61 -1.7 4,089,827 - MPMX20_03880 0.61 +3.8 4,089,873 + MPMX20_03880 0.72 +0.3 4,089,873 + MPMX20_03880 0.72 -0.7 4,089,881 - MPMX20_03880 0.74 +1.2 4,089,977 + +0.0 4,089,982 - -1.0 4,089,982 - -0.5 4,090,025 + -0.3 4,090,095 - MPMX20_03881 0.17 +0.4 4,090,097 + MPMX20_03881 0.17 -1.5 4,090,105 - MPMX20_03881 0.19 +0.6 4,090,105 - MPMX20_03881 0.19 -0.1 4,090,105 - MPMX20_03881 0.19 -0.6 4,090,197 - MPMX20_03881 0.33 +1.2 4,090,259 + MPMX20_03881 0.43 -0.6 4,090,319 + MPMX20_03881 0.52 +0.6 4,090,381 + MPMX20_03881 0.62 +2.8 4,090,429 - MPMX20_03881 0.70 -0.0 4,090,429 - MPMX20_03881 0.70 +1.8 4,090,430 + MPMX20_03881 0.70 +0.4 4,090,502 + MPMX20_03881 0.81 +0.8 4,090,622 + -0.9 4,090,622 + -2.2 4,090,630 - -1.4 4,090,680 + -0.6 4,090,680 + -0.2 4,090,688 + -0.3 4,090,689 - -1.1 4,090,738 + -0.8 4,090,792 + +0.2 4,090,792 + -0.9 4,090,792 + +0.2 4,090,804 + -1.0 4,090,838 + -1.3 4,090,852 + -0.8 4,090,852 + +1.2 4,090,852 + -2.6 4,090,859 - +0.4 4,090,860 - +1.2 4,090,860 - -0.9 4,090,860 - -0.0 4,090,920 + -1.2 4,090,920 + +1.2 4,090,920 + +0.4 4,090,920 + -0.9 4,090,925 + -0.6 4,090,928 - +1.2 4,090,928 - +1.8 4,090,928 - -0.2 4,090,933 - +1.8 4,090,979 + MPMX20_03882 0.10 +0.8 4,090,979 + MPMX20_03882 0.10 -1.5 4,090,987 - MPMX20_03882 0.11 -0.9 4,091,004 - MPMX20_03882 0.12 -1.6 4,091,012 - MPMX20_03882 0.13 +0.4 4,091,018 - MPMX20_03882 0.13 +0.2 4,091,020 - MPMX20_03882 0.13 +0.8 4,091,023 + MPMX20_03882 0.13 -1.5 4,091,028 + MPMX20_03882 0.14 -1.6 4,091,036 - MPMX20_03882 0.14 -1.7 4,091,047 - MPMX20_03882 0.15 -0.0 4,091,057 + MPMX20_03882 0.16 -0.6 4,091,136 + MPMX20_03882 0.21 -0.6 4,091,144 - MPMX20_03882 0.22 +0.8 4,091,145 - MPMX20_03882 0.22 -0.8 4,091,145 - MPMX20_03882 0.22 +1.2 4,091,145 - MPMX20_03882 0.22 +0.2 4,091,145 - MPMX20_03882 0.22 +0.8 4,091,163 + MPMX20_03882 0.23 -1.3 4,091,258 + MPMX20_03882 0.29 +0.4 4,091,258 + MPMX20_03882 0.29 -1.8 4,091,258 + MPMX20_03882 0.29 -0.8 4,091,266 - MPMX20_03882 0.30 -1.1 4,091,266 - MPMX20_03882 0.30 +1.8 4,091,349 - MPMX20_03882 0.35 -0.7 4,091,367 + MPMX20_03882 0.37 -1.1 4,091,375 - MPMX20_03882 0.37 +1.2 4,091,453 + MPMX20_03882 0.43 -0.4 4,091,458 + MPMX20_03882 0.43 -1.1 4,091,461 - MPMX20_03882 0.43 -0.8 4,091,518 + MPMX20_03882 0.47 -1.9 4,091,629 + MPMX20_03882 0.54 -2.0 4,091,637 - MPMX20_03882 0.55 -0.2 4,091,637 - MPMX20_03882 0.55 -0.7 4,091,637 - MPMX20_03882 0.55 -1.0 4,091,657 + MPMX20_03882 0.56 -1.1 4,091,692 + MPMX20_03882 0.59 -1.0 4,091,718 + MPMX20_03882 0.60 +0.2 4,091,726 - MPMX20_03882 0.61 +0.2 4,091,726 - MPMX20_03882 0.61 -0.0 4,091,733 + MPMX20_03882 0.61 -1.6 4,091,733 + MPMX20_03882 0.61 -1.4 4,091,756 + MPMX20_03882 0.63 -0.8 4,091,804 - MPMX20_03882 0.66 -0.6 4,091,806 - MPMX20_03882 0.66 -0.4 4,091,828 + MPMX20_03882 0.68 -2.2 4,091,833 - MPMX20_03882 0.68 -0.8 4,091,858 - MPMX20_03882 0.70 +1.2 4,091,908 - MPMX20_03882 0.73 +0.4 4,091,941 + MPMX20_03882 0.76 -0.0 4,091,946 - MPMX20_03882 0.76 -2.4 4,091,949 - MPMX20_03882 0.76 -1.2 4,092,015 - MPMX20_03882 0.81 +0.4 4,092,025 - MPMX20_03882 0.81 -2.0 4,092,137 + MPMX20_03882 0.89 -2.2 4,092,145 - MPMX20_03882 0.89 +1.2 4,092,145 - MPMX20_03882 0.89 -0.5 4,092,191 + -1.8 4,092,209 + -1.7 4,092,217 - -0.2 4,092,223 + +1.8 4,092,223 + -1.3 4,092,231 - +2.2 4,092,231 - -0.7 4,092,332 - -0.9 4,092,351 + +1.2 4,092,352 - -1.0 4,092,359 - -0.8 4,092,374 + -1.5 4,092,374 + +0.8 4,092,386 + -0.4 4,092,386 + -0.0 4,092,421 + +1.8 4,092,452 - +0.2 4,092,452 - -0.8 4,092,462 - +0.8 4,092,565 - MPMX20_03883 0.11 +0.4 4,092,565 - MPMX20_03883 0.11 -1.2 4,092,581 - MPMX20_03883 0.13 +2.4 4,092,645 + MPMX20_03883 0.23 +0.8 4,092,645 + MPMX20_03883 0.23 -0.8 4,092,653 - MPMX20_03883 0.24 +0.4 4,092,658 - MPMX20_03883 0.25 -0.8 4,092,678 + MPMX20_03883 0.28 -0.9 4,092,678 + MPMX20_03883 0.28 +1.1 4,092,678 + MPMX20_03883 0.28 -0.2 4,092,678 + MPMX20_03883 0.28 -0.6 4,092,678 + MPMX20_03883 0.28 -0.0 4,092,686 - MPMX20_03883 0.29 +0.8 4,092,686 - MPMX20_03883 0.29 -0.0 4,092,701 + MPMX20_03883 0.31 -0.4 4,092,742 + MPMX20_03883 0.37 +0.8 4,092,742 + MPMX20_03883 0.37 +0.2 4,092,750 - MPMX20_03883 0.39 -0.4 4,092,752 + MPMX20_03883 0.39 -1.5 4,092,772 + MPMX20_03883 0.42 -0.3 4,093,001 + MPMX20_03883 0.76 -1.7 4,093,009 - MPMX20_03883 0.77 -0.3 4,093,064 + MPMX20_03883 0.86 -0.6 4,093,079 + MPMX20_03883 0.88 -2.2 4,093,107 - -0.6 4,093,107 - -0.2 4,093,141 - +0.8 4,093,219 + -1.0 4,093,285 - MPMX20_03884 0.11 -2.0 4,093,290 - MPMX20_03884 0.11 +0.9
Or see this region's nucleotide sequence