Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02989

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02988 and MPMX20_02989 are separated by 119 nucleotidesMPMX20_02989 and MPMX20_02990 are separated by 80 nucleotides MPMX20_02988: MPMX20_02988 - hypothetical protein, at 3,121,362 to 3,123,134 _02988 MPMX20_02989: MPMX20_02989 - tRNA-Asn, at 3,123,254 to 3,123,329 _02989 MPMX20_02990: MPMX20_02990 - putative FMN/FAD exporter YeeO, at 3,123,410 to 3,124,852 _02990 Position (kb) 3123 3124Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3122.329 kb on + strand, within MPMX20_02988at 3122.462 kb on - strand, within MPMX20_02988at 3122.577 kb on - strand, within MPMX20_02988at 3122.591 kb on + strand, within MPMX20_02988at 3122.666 kb on - strand, within MPMX20_02988at 3122.760 kb on + strand, within MPMX20_02988at 3122.760 kb on + strand, within MPMX20_02988at 3122.767 kb on + strand, within MPMX20_02988at 3122.768 kb on - strand, within MPMX20_02988at 3122.775 kb on - strand, within MPMX20_02988at 3122.849 kb on + strand, within MPMX20_02988at 3122.895 kb on - strand, within MPMX20_02988at 3122.912 kb on + strand, within MPMX20_02988at 3122.922 kb on + strand, within MPMX20_02988at 3122.981 kb on + strandat 3122.981 kb on + strandat 3122.985 kb on - strandat 3122.985 kb on - strandat 3122.985 kb on - strandat 3122.992 kb on + strandat 3123.000 kb on - strandat 3123.000 kb on - strandat 3123.129 kb on - strandat 3123.185 kb on - strandat 3123.420 kb on - strandat 3123.448 kb on + strandat 3123.508 kb on + strandat 3123.509 kb on - strandat 3123.516 kb on - strandat 3123.536 kb on - strandat 3123.553 kb on - strandat 3123.570 kb on - strand, within MPMX20_02990at 3123.570 kb on - strand, within MPMX20_02990at 3123.597 kb on - strand, within MPMX20_02990at 3123.616 kb on - strand, within MPMX20_02990at 3123.616 kb on - strand, within MPMX20_02990at 3123.656 kb on + strand, within MPMX20_02990at 3123.671 kb on + strand, within MPMX20_02990at 3123.686 kb on - strand, within MPMX20_02990at 3123.719 kb on - strand, within MPMX20_02990at 3123.730 kb on - strand, within MPMX20_02990at 3123.841 kb on + strand, within MPMX20_02990at 3123.849 kb on - strand, within MPMX20_02990at 3123.942 kb on - strand, within MPMX20_02990at 3124.009 kb on + strand, within MPMX20_02990at 3124.009 kb on + strand, within MPMX20_02990at 3124.017 kb on - strand, within MPMX20_02990at 3124.022 kb on - strand, within MPMX20_02990at 3124.054 kb on - strand, within MPMX20_02990at 3124.056 kb on + strand, within MPMX20_02990at 3124.064 kb on - strand, within MPMX20_02990at 3124.153 kb on - strand, within MPMX20_02990at 3124.158 kb on - strand, within MPMX20_02990at 3124.158 kb on - strand, within MPMX20_02990at 3124.158 kb on - strand, within MPMX20_02990at 3124.234 kb on - strand, within MPMX20_02990at 3124.251 kb on + strand, within MPMX20_02990at 3124.268 kb on + strand, within MPMX20_02990at 3124.276 kb on - strand, within MPMX20_02990at 3124.286 kb on - strand, within MPMX20_02990at 3124.291 kb on - strand, within MPMX20_02990

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,122,329 + MPMX20_02988 0.55 +1.2
3,122,462 - MPMX20_02988 0.62 +0.9
3,122,577 - MPMX20_02988 0.69 -2.5
3,122,591 + MPMX20_02988 0.69 -1.4
3,122,666 - MPMX20_02988 0.74 +0.3
3,122,760 + MPMX20_02988 0.79 -0.1
3,122,760 + MPMX20_02988 0.79 +0.8
3,122,767 + MPMX20_02988 0.79 -2.3
3,122,768 - MPMX20_02988 0.79 +0.3
3,122,775 - MPMX20_02988 0.80 -1.1
3,122,849 + MPMX20_02988 0.84 +0.3
3,122,895 - MPMX20_02988 0.86 -2.8
3,122,912 + MPMX20_02988 0.87 -0.3
3,122,922 + MPMX20_02988 0.88 -0.8
3,122,981 + -1.0
3,122,981 + +0.5
3,122,985 - +0.9
3,122,985 - -1.1
3,122,985 - -0.3
3,122,992 + -1.7
3,123,000 - +0.3
3,123,000 - -0.1
3,123,129 - -0.6
3,123,185 - -0.8
3,123,420 - -0.3
3,123,448 + -0.5
3,123,508 + +0.5
3,123,509 - -0.3
3,123,516 - +1.1
3,123,536 - +0.0
3,123,553 - +0.5
3,123,570 - MPMX20_02990 0.11 +0.6
3,123,570 - MPMX20_02990 0.11 -0.1
3,123,597 - MPMX20_02990 0.13 -2.7
3,123,616 - MPMX20_02990 0.14 +0.0
3,123,616 - MPMX20_02990 0.14 -1.0
3,123,656 + MPMX20_02990 0.17 -0.1
3,123,671 + MPMX20_02990 0.18 +0.5
3,123,686 - MPMX20_02990 0.19 -0.1
3,123,719 - MPMX20_02990 0.21 +1.3
3,123,730 - MPMX20_02990 0.22 -0.3
3,123,841 + MPMX20_02990 0.30 -0.8
3,123,849 - MPMX20_02990 0.30 +0.9
3,123,942 - MPMX20_02990 0.37 -0.1
3,124,009 + MPMX20_02990 0.42 +0.2
3,124,009 + MPMX20_02990 0.42 +2.9
3,124,017 - MPMX20_02990 0.42 -1.5
3,124,022 - MPMX20_02990 0.42 -0.5
3,124,054 - MPMX20_02990 0.45 -1.8
3,124,056 + MPMX20_02990 0.45 -0.3
3,124,064 - MPMX20_02990 0.45 -0.4
3,124,153 - MPMX20_02990 0.51 -1.0
3,124,158 - MPMX20_02990 0.52 +0.9
3,124,158 - MPMX20_02990 0.52 -0.9
3,124,158 - MPMX20_02990 0.52 -0.7
3,124,234 - MPMX20_02990 0.57 -0.2
3,124,251 + MPMX20_02990 0.58 -1.2
3,124,268 + MPMX20_02990 0.59 +2.7
3,124,276 - MPMX20_02990 0.60 -0.3
3,124,286 - MPMX20_02990 0.61 +2.5
3,124,291 - MPMX20_02990 0.61 -1.2

Or see this region's nucleotide sequence