Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02759

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02758 and MPMX20_02759 are separated by 124 nucleotidesMPMX20_02759 and MPMX20_02760 are separated by 55 nucleotides MPMX20_02758: MPMX20_02758 - HTH-type transcriptional regulator HexR, at 2,914,151 to 2,915,038 _02758 MPMX20_02759: MPMX20_02759 - Pyruvate kinase II, at 2,915,163 to 2,916,605 _02759 MPMX20_02760: MPMX20_02760 - Lipid A biosynthesis myristoyltransferase, at 2,916,661 to 2,917,632 _02760 Position (kb) 2915 2916 2917Strain fitness (log2 ratio) -2 -1 0 1 2at 2914.199 kb on + strandat 2914.268 kb on + strand, within MPMX20_02758at 2914.302 kb on - strand, within MPMX20_02758at 2914.447 kb on - strand, within MPMX20_02758at 2914.486 kb on + strand, within MPMX20_02758at 2914.491 kb on + strand, within MPMX20_02758at 2914.653 kb on + strand, within MPMX20_02758at 2914.675 kb on - strand, within MPMX20_02758at 2914.675 kb on - strand, within MPMX20_02758at 2914.711 kb on - strand, within MPMX20_02758at 2914.781 kb on + strand, within MPMX20_02758at 2914.833 kb on + strand, within MPMX20_02758at 2914.839 kb on + strand, within MPMX20_02758at 2914.841 kb on - strand, within MPMX20_02758at 2914.932 kb on - strand, within MPMX20_02758at 2914.934 kb on - strand, within MPMX20_02758at 2914.961 kb on + strandat 2914.961 kb on + strandat 2914.963 kb on + strandat 2914.980 kb on - strandat 2915.081 kb on - strandat 2915.087 kb on + strandat 2915.095 kb on - strandat 2915.111 kb on - strandat 2915.131 kb on + strandat 2915.138 kb on - strandat 2915.156 kb on + strandat 2915.162 kb on - strandat 2915.164 kb on - strandat 2915.175 kb on - strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.200 kb on + strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.208 kb on - strandat 2915.298 kb on - strandat 2915.452 kb on + strand, within MPMX20_02759at 2915.460 kb on - strand, within MPMX20_02759at 2915.462 kb on + strand, within MPMX20_02759at 2915.462 kb on + strand, within MPMX20_02759at 2915.462 kb on + strand, within MPMX20_02759at 2915.465 kb on - strand, within MPMX20_02759at 2915.636 kb on - strand, within MPMX20_02759at 2915.666 kb on + strand, within MPMX20_02759at 2915.681 kb on - strand, within MPMX20_02759at 2915.687 kb on - strand, within MPMX20_02759at 2915.777 kb on - strand, within MPMX20_02759at 2915.959 kb on + strand, within MPMX20_02759at 2915.972 kb on - strand, within MPMX20_02759at 2916.053 kb on - strand, within MPMX20_02759at 2916.053 kb on - strand, within MPMX20_02759at 2916.063 kb on - strand, within MPMX20_02759at 2916.063 kb on - strand, within MPMX20_02759at 2916.074 kb on + strand, within MPMX20_02759at 2916.074 kb on + strand, within MPMX20_02759at 2916.074 kb on + strand, within MPMX20_02759at 2916.111 kb on - strand, within MPMX20_02759at 2916.140 kb on - strand, within MPMX20_02759at 2916.159 kb on - strand, within MPMX20_02759at 2916.218 kb on - strand, within MPMX20_02759at 2916.277 kb on + strand, within MPMX20_02759at 2916.295 kb on - strand, within MPMX20_02759at 2916.346 kb on + strand, within MPMX20_02759at 2916.358 kb on + strand, within MPMX20_02759at 2916.433 kb on + strand, within MPMX20_02759at 2916.523 kb on - strandat 2916.616 kb on + strandat 2916.631 kb on + strandat 2916.681 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,914,199 + -0.2
2,914,268 + MPMX20_02758 0.13 -0.9
2,914,302 - MPMX20_02758 0.17 +2.3
2,914,447 - MPMX20_02758 0.33 +0.3
2,914,486 + MPMX20_02758 0.38 -2.0
2,914,491 + MPMX20_02758 0.38 +0.3
2,914,653 + MPMX20_02758 0.57 -0.2
2,914,675 - MPMX20_02758 0.59 -0.4
2,914,675 - MPMX20_02758 0.59 -0.1
2,914,711 - MPMX20_02758 0.63 -0.7
2,914,781 + MPMX20_02758 0.71 +0.3
2,914,833 + MPMX20_02758 0.77 -0.1
2,914,839 + MPMX20_02758 0.77 +2.5
2,914,841 - MPMX20_02758 0.78 -0.6
2,914,932 - MPMX20_02758 0.88 +1.1
2,914,934 - MPMX20_02758 0.88 +0.4
2,914,961 + +0.6
2,914,961 + +0.0
2,914,963 + +0.2
2,914,980 - -1.7
2,915,081 - -0.5
2,915,087 + -2.3
2,915,095 - -2.2
2,915,111 - +0.1
2,915,131 + +2.7
2,915,138 - +0.7
2,915,156 + +0.4
2,915,162 - +1.3
2,915,164 - +0.9
2,915,175 - -1.9
2,915,200 + -1.5
2,915,200 + -1.4
2,915,200 + -1.1
2,915,200 + -1.7
2,915,200 + -0.3
2,915,200 + -1.1
2,915,200 + -1.1
2,915,200 + -0.9
2,915,200 + -0.7
2,915,208 - -0.9
2,915,208 - -2.2
2,915,208 - -1.4
2,915,208 - -2.4
2,915,208 - -0.8
2,915,208 - -0.4
2,915,208 - -0.8
2,915,208 - -1.5
2,915,208 - -1.6
2,915,208 - -1.4
2,915,208 - -1.5
2,915,208 - -1.5
2,915,298 - -0.4
2,915,452 + MPMX20_02759 0.20 -2.2
2,915,460 - MPMX20_02759 0.21 -1.9
2,915,462 + MPMX20_02759 0.21 +0.5
2,915,462 + MPMX20_02759 0.21 -1.4
2,915,462 + MPMX20_02759 0.21 +1.7
2,915,465 - MPMX20_02759 0.21 -0.3
2,915,636 - MPMX20_02759 0.33 -0.7
2,915,666 + MPMX20_02759 0.35 -1.7
2,915,681 - MPMX20_02759 0.36 +2.7
2,915,687 - MPMX20_02759 0.36 -0.6
2,915,777 - MPMX20_02759 0.43 +0.7
2,915,959 + MPMX20_02759 0.55 -0.7
2,915,972 - MPMX20_02759 0.56 -2.4
2,916,053 - MPMX20_02759 0.62 -1.3
2,916,053 - MPMX20_02759 0.62 +1.4
2,916,063 - MPMX20_02759 0.62 -1.2
2,916,063 - MPMX20_02759 0.62 +0.1
2,916,074 + MPMX20_02759 0.63 +0.7
2,916,074 + MPMX20_02759 0.63 -1.2
2,916,074 + MPMX20_02759 0.63 -1.1
2,916,111 - MPMX20_02759 0.66 -1.2
2,916,140 - MPMX20_02759 0.68 -0.8
2,916,159 - MPMX20_02759 0.69 -2.2
2,916,218 - MPMX20_02759 0.73 +2.7
2,916,277 + MPMX20_02759 0.77 -2.1
2,916,295 - MPMX20_02759 0.78 -0.3
2,916,346 + MPMX20_02759 0.82 +0.4
2,916,358 + MPMX20_02759 0.83 -1.7
2,916,433 + MPMX20_02759 0.88 +0.7
2,916,523 - +2.7
2,916,616 + -1.2
2,916,631 + -0.1
2,916,681 - +0.4

Or see this region's nucleotide sequence