Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02758 and MPMX20_02759 are separated by 124 nucleotides MPMX20_02759 and MPMX20_02760 are separated by 55 nucleotides
MPMX20_02758: MPMX20_02758 - HTH-type transcriptional regulator HexR, at 2,914,151 to 2,915,038
_02758
MPMX20_02759: MPMX20_02759 - Pyruvate kinase II, at 2,915,163 to 2,916,605
_02759
MPMX20_02760: MPMX20_02760 - Lipid A biosynthesis myristoyltransferase, at 2,916,661 to 2,917,632
_02760
Position (kb)
2915
2916
2917 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2914.199 kb on + strand at 2914.268 kb on + strand, within MPMX20_02758 at 2914.302 kb on - strand, within MPMX20_02758 at 2914.447 kb on - strand, within MPMX20_02758 at 2914.486 kb on + strand, within MPMX20_02758 at 2914.491 kb on + strand, within MPMX20_02758 at 2914.653 kb on + strand, within MPMX20_02758 at 2914.675 kb on - strand, within MPMX20_02758 at 2914.675 kb on - strand, within MPMX20_02758 at 2914.711 kb on - strand, within MPMX20_02758 at 2914.781 kb on + strand, within MPMX20_02758 at 2914.833 kb on + strand, within MPMX20_02758 at 2914.839 kb on + strand, within MPMX20_02758 at 2914.841 kb on - strand, within MPMX20_02758 at 2914.932 kb on - strand, within MPMX20_02758 at 2914.934 kb on - strand, within MPMX20_02758 at 2914.961 kb on + strand at 2914.961 kb on + strand at 2914.963 kb on + strand at 2914.980 kb on - strand at 2915.081 kb on - strand at 2915.087 kb on + strand at 2915.095 kb on - strand at 2915.111 kb on - strand at 2915.131 kb on + strand at 2915.138 kb on - strand at 2915.156 kb on + strand at 2915.162 kb on - strand at 2915.164 kb on - strand at 2915.175 kb on - strand at 2915.200 kb on + strand at 2915.200 kb on + strand at 2915.200 kb on + strand at 2915.200 kb on + strand at 2915.200 kb on + strand at 2915.200 kb on + strand at 2915.200 kb on + strand at 2915.200 kb on + strand at 2915.200 kb on + strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.208 kb on - strand at 2915.298 kb on - strand at 2915.452 kb on + strand, within MPMX20_02759 at 2915.460 kb on - strand, within MPMX20_02759 at 2915.462 kb on + strand, within MPMX20_02759 at 2915.462 kb on + strand, within MPMX20_02759 at 2915.462 kb on + strand, within MPMX20_02759 at 2915.465 kb on - strand, within MPMX20_02759 at 2915.636 kb on - strand, within MPMX20_02759 at 2915.666 kb on + strand, within MPMX20_02759 at 2915.681 kb on - strand, within MPMX20_02759 at 2915.687 kb on - strand, within MPMX20_02759 at 2915.777 kb on - strand, within MPMX20_02759 at 2915.959 kb on + strand, within MPMX20_02759 at 2915.972 kb on - strand, within MPMX20_02759 at 2916.053 kb on - strand, within MPMX20_02759 at 2916.053 kb on - strand, within MPMX20_02759 at 2916.063 kb on - strand, within MPMX20_02759 at 2916.063 kb on - strand, within MPMX20_02759 at 2916.074 kb on + strand, within MPMX20_02759 at 2916.074 kb on + strand, within MPMX20_02759 at 2916.074 kb on + strand, within MPMX20_02759 at 2916.111 kb on - strand, within MPMX20_02759 at 2916.140 kb on - strand, within MPMX20_02759 at 2916.159 kb on - strand, within MPMX20_02759 at 2916.218 kb on - strand, within MPMX20_02759 at 2916.277 kb on + strand, within MPMX20_02759 at 2916.295 kb on - strand, within MPMX20_02759 at 2916.346 kb on + strand, within MPMX20_02759 at 2916.358 kb on + strand, within MPMX20_02759 at 2916.433 kb on + strand, within MPMX20_02759 at 2916.523 kb on - strand at 2916.616 kb on + strand at 2916.631 kb on + strand at 2916.681 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 2,914,199 + -0.2 2,914,268 + MPMX20_02758 0.13 -0.9 2,914,302 - MPMX20_02758 0.17 +2.3 2,914,447 - MPMX20_02758 0.33 +0.3 2,914,486 + MPMX20_02758 0.38 -2.0 2,914,491 + MPMX20_02758 0.38 +0.3 2,914,653 + MPMX20_02758 0.57 -0.2 2,914,675 - MPMX20_02758 0.59 -0.4 2,914,675 - MPMX20_02758 0.59 -0.1 2,914,711 - MPMX20_02758 0.63 -0.7 2,914,781 + MPMX20_02758 0.71 +0.3 2,914,833 + MPMX20_02758 0.77 -0.1 2,914,839 + MPMX20_02758 0.77 +2.5 2,914,841 - MPMX20_02758 0.78 -0.6 2,914,932 - MPMX20_02758 0.88 +1.1 2,914,934 - MPMX20_02758 0.88 +0.4 2,914,961 + +0.6 2,914,961 + +0.0 2,914,963 + +0.2 2,914,980 - -1.7 2,915,081 - -0.5 2,915,087 + -2.3 2,915,095 - -2.2 2,915,111 - +0.1 2,915,131 + +2.7 2,915,138 - +0.7 2,915,156 + +0.4 2,915,162 - +1.3 2,915,164 - +0.9 2,915,175 - -1.9 2,915,200 + -1.5 2,915,200 + -1.4 2,915,200 + -1.1 2,915,200 + -1.7 2,915,200 + -0.3 2,915,200 + -1.1 2,915,200 + -1.1 2,915,200 + -0.9 2,915,200 + -0.7 2,915,208 - -0.9 2,915,208 - -2.2 2,915,208 - -1.4 2,915,208 - -2.4 2,915,208 - -0.8 2,915,208 - -0.4 2,915,208 - -0.8 2,915,208 - -1.5 2,915,208 - -1.6 2,915,208 - -1.4 2,915,208 - -1.5 2,915,208 - -1.5 2,915,298 - -0.4 2,915,452 + MPMX20_02759 0.20 -2.2 2,915,460 - MPMX20_02759 0.21 -1.9 2,915,462 + MPMX20_02759 0.21 +0.5 2,915,462 + MPMX20_02759 0.21 -1.4 2,915,462 + MPMX20_02759 0.21 +1.7 2,915,465 - MPMX20_02759 0.21 -0.3 2,915,636 - MPMX20_02759 0.33 -0.7 2,915,666 + MPMX20_02759 0.35 -1.7 2,915,681 - MPMX20_02759 0.36 +2.7 2,915,687 - MPMX20_02759 0.36 -0.6 2,915,777 - MPMX20_02759 0.43 +0.7 2,915,959 + MPMX20_02759 0.55 -0.7 2,915,972 - MPMX20_02759 0.56 -2.4 2,916,053 - MPMX20_02759 0.62 -1.3 2,916,053 - MPMX20_02759 0.62 +1.4 2,916,063 - MPMX20_02759 0.62 -1.2 2,916,063 - MPMX20_02759 0.62 +0.1 2,916,074 + MPMX20_02759 0.63 +0.7 2,916,074 + MPMX20_02759 0.63 -1.2 2,916,074 + MPMX20_02759 0.63 -1.1 2,916,111 - MPMX20_02759 0.66 -1.2 2,916,140 - MPMX20_02759 0.68 -0.8 2,916,159 - MPMX20_02759 0.69 -2.2 2,916,218 - MPMX20_02759 0.73 +2.7 2,916,277 + MPMX20_02759 0.77 -2.1 2,916,295 - MPMX20_02759 0.78 -0.3 2,916,346 + MPMX20_02759 0.82 +0.4 2,916,358 + MPMX20_02759 0.83 -1.7 2,916,433 + MPMX20_02759 0.88 +0.7 2,916,523 - +2.7 2,916,616 + -1.2 2,916,631 + -0.1 2,916,681 - +0.4
Or see this region's nucleotide sequence