Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00147

Experiment: 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00146 and MPMX20_00147 are separated by 224 nucleotidesMPMX20_00147 and MPMX20_00148 are separated by 0 nucleotidesMPMX20_00148 and MPMX20_00149 overlap by 7 nucleotides MPMX20_00146: MPMX20_00146 - Inner membrane symporter YicJ, at 149,576 to 150,976 _00146 MPMX20_00147: MPMX20_00147 - HTH-type transcriptional activator RhaR, at 151,201 to 152,019 _00147 MPMX20_00148: MPMX20_00148 - L-ribulose-5-phosphate 4-epimerase SgbE, at 152,020 to 152,715 _00148 MPMX20_00149: MPMX20_00149 - L-ribulose-5-phosphate 3-epimerase UlaE, at 152,709 to 153,569 _00149 Position (kb) 151 152 153Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 150.204 kb on + strand, within MPMX20_00146at 150.333 kb on - strand, within MPMX20_00146at 150.368 kb on + strand, within MPMX20_00146at 150.373 kb on + strand, within MPMX20_00146at 150.381 kb on - strand, within MPMX20_00146at 150.381 kb on - strand, within MPMX20_00146at 150.381 kb on - strand, within MPMX20_00146at 150.381 kb on - strand, within MPMX20_00146at 150.381 kb on - strand, within MPMX20_00146at 150.408 kb on + strand, within MPMX20_00146at 150.410 kb on - strand, within MPMX20_00146at 150.431 kb on - strand, within MPMX20_00146at 150.439 kb on + strand, within MPMX20_00146at 150.465 kb on + strand, within MPMX20_00146at 150.470 kb on + strand, within MPMX20_00146at 150.475 kb on + strand, within MPMX20_00146at 150.476 kb on - strand, within MPMX20_00146at 150.478 kb on - strand, within MPMX20_00146at 150.483 kb on - strand, within MPMX20_00146at 150.506 kb on - strand, within MPMX20_00146at 150.536 kb on - strand, within MPMX20_00146at 150.538 kb on + strand, within MPMX20_00146at 150.586 kb on + strand, within MPMX20_00146at 150.637 kb on + strand, within MPMX20_00146at 150.637 kb on + strand, within MPMX20_00146at 150.644 kb on + strand, within MPMX20_00146at 150.644 kb on + strand, within MPMX20_00146at 150.644 kb on + strand, within MPMX20_00146at 150.644 kb on + strand, within MPMX20_00146at 150.652 kb on - strand, within MPMX20_00146at 150.652 kb on - strand, within MPMX20_00146at 150.652 kb on - strand, within MPMX20_00146at 150.678 kb on + strand, within MPMX20_00146at 150.773 kb on - strand, within MPMX20_00146at 150.775 kb on + strand, within MPMX20_00146at 150.777 kb on + strand, within MPMX20_00146at 150.777 kb on + strand, within MPMX20_00146at 150.783 kb on - strand, within MPMX20_00146at 150.785 kb on - strand, within MPMX20_00146at 150.785 kb on - strand, within MPMX20_00146at 150.833 kb on - strand, within MPMX20_00146at 150.833 kb on - strand, within MPMX20_00146at 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.860 kb on + strandat 150.865 kb on + strandat 150.868 kb on - strandat 150.868 kb on - strandat 150.868 kb on - strandat 150.868 kb on - strandat 150.868 kb on - strandat 150.868 kb on - strandat 150.868 kb on - strandat 150.884 kb on + strandat 150.884 kb on + strandat 150.915 kb on + strandat 150.923 kb on + strandat 150.928 kb on + strandat 150.938 kb on + strandat 150.947 kb on + strandat 150.947 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.964 kb on + strandat 150.972 kb on + strandat 150.972 kb on + strandat 150.972 kb on + strandat 150.972 kb on + strandat 150.972 kb on + strandat 150.972 kb on + strandat 150.972 kb on + strandat 150.972 kb on - strandat 150.972 kb on - strandat 150.972 kb on - strandat 150.979 kb on + strandat 150.980 kb on - strandat 150.980 kb on - strandat 150.983 kb on + strandat 150.984 kb on + strandat 150.984 kb on + strandat 151.026 kb on + strandat 151.031 kb on + strandat 151.031 kb on + strandat 151.039 kb on + strandat 151.044 kb on - strandat 151.045 kb on + strandat 151.045 kb on + strandat 151.058 kb on - strandat 151.087 kb on + strandat 151.087 kb on + strandat 151.087 kb on + strandat 151.087 kb on + strandat 151.087 kb on + strandat 151.095 kb on - strandat 151.095 kb on - strandat 151.095 kb on - strandat 151.095 kb on - strandat 151.210 kb on - strandat 151.249 kb on - strandat 151.271 kb on + strandat 151.297 kb on - strand, within MPMX20_00147at 151.297 kb on - strand, within MPMX20_00147at 151.297 kb on - strand, within MPMX20_00147at 151.297 kb on - strand, within MPMX20_00147at 151.297 kb on - strand, within MPMX20_00147at 151.303 kb on - strand, within MPMX20_00147at 151.306 kb on - strand, within MPMX20_00147at 151.364 kb on - strand, within MPMX20_00147at 151.367 kb on + strand, within MPMX20_00147at 151.369 kb on + strand, within MPMX20_00147at 151.380 kb on - strand, within MPMX20_00147at 151.380 kb on - strand, within MPMX20_00147at 151.380 kb on - strand, within MPMX20_00147at 151.380 kb on - strand, within MPMX20_00147at 151.386 kb on + strand, within MPMX20_00147at 151.387 kb on - strand, within MPMX20_00147at 151.387 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.394 kb on - strand, within MPMX20_00147at 151.403 kb on + strand, within MPMX20_00147at 151.417 kb on + strand, within MPMX20_00147at 151.448 kb on - strand, within MPMX20_00147at 151.448 kb on - strand, within MPMX20_00147at 151.473 kb on + strand, within MPMX20_00147at 151.473 kb on + strand, within MPMX20_00147at 151.513 kb on - strand, within MPMX20_00147at 151.515 kb on + strand, within MPMX20_00147at 151.515 kb on + strand, within MPMX20_00147at 151.515 kb on + strand, within MPMX20_00147at 151.515 kb on + strand, within MPMX20_00147at 151.523 kb on - strand, within MPMX20_00147at 151.549 kb on + strand, within MPMX20_00147at 151.603 kb on - strand, within MPMX20_00147at 151.644 kb on + strand, within MPMX20_00147at 151.644 kb on - strand, within MPMX20_00147at 151.652 kb on - strand, within MPMX20_00147at 151.654 kb on + strand, within MPMX20_00147at 151.654 kb on - strand, within MPMX20_00147at 151.659 kb on + strand, within MPMX20_00147at 151.662 kb on - strand, within MPMX20_00147at 151.728 kb on - strand, within MPMX20_00147at 151.759 kb on + strand, within MPMX20_00147at 151.759 kb on + strand, within MPMX20_00147at 151.759 kb on + strand, within MPMX20_00147at 151.760 kb on - strand, within MPMX20_00147at 151.760 kb on - strand, within MPMX20_00147at 151.767 kb on - strand, within MPMX20_00147at 151.767 kb on - strand, within MPMX20_00147at 151.767 kb on - strand, within MPMX20_00147at 151.775 kb on - strand, within MPMX20_00147at 151.811 kb on + strand, within MPMX20_00147at 151.824 kb on - strand, within MPMX20_00147at 151.824 kb on - strand, within MPMX20_00147at 151.913 kb on + strand, within MPMX20_00147at 151.969 kb on - strandat 151.984 kb on + strandat 151.991 kb on + strandat 151.991 kb on + strandat 151.991 kb on + strandat 151.991 kb on + strandat 151.991 kb on + strandat 151.992 kb on + strandat 151.992 kb on - strandat 151.994 kb on + strandat 151.994 kb on + strandat 151.999 kb on - strandat 151.999 kb on - strandat 151.999 kb on - strandat 151.999 kb on - strandat 151.999 kb on - strandat 152.012 kb on - strandat 152.032 kb on + strandat 152.066 kb on - strandat 152.098 kb on - strand, within MPMX20_00148at 152.156 kb on + strand, within MPMX20_00148at 152.156 kb on - strand, within MPMX20_00148at 152.164 kb on - strand, within MPMX20_00148at 152.164 kb on - strand, within MPMX20_00148at 152.166 kb on - strand, within MPMX20_00148at 152.199 kb on - strand, within MPMX20_00148at 152.222 kb on + strand, within MPMX20_00148at 152.238 kb on + strand, within MPMX20_00148at 152.238 kb on + strand, within MPMX20_00148at 152.245 kb on - strand, within MPMX20_00148at 152.246 kb on - strand, within MPMX20_00148at 152.246 kb on - strand, within MPMX20_00148at 152.246 kb on - strand, within MPMX20_00148at 152.253 kb on + strand, within MPMX20_00148at 152.282 kb on - strand, within MPMX20_00148at 152.318 kb on + strand, within MPMX20_00148at 152.318 kb on + strand, within MPMX20_00148at 152.374 kb on - strand, within MPMX20_00148at 152.394 kb on - strand, within MPMX20_00148at 152.394 kb on - strand, within MPMX20_00148at 152.428 kb on + strand, within MPMX20_00148at 152.428 kb on + strand, within MPMX20_00148at 152.459 kb on + strand, within MPMX20_00148at 152.477 kb on - strand, within MPMX20_00148at 152.477 kb on - strand, within MPMX20_00148at 152.486 kb on - strand, within MPMX20_00148at 152.486 kb on - strand, within MPMX20_00148at 152.546 kb on + strand, within MPMX20_00148at 152.554 kb on - strand, within MPMX20_00148at 152.554 kb on - strand, within MPMX20_00148at 152.554 kb on - strand, within MPMX20_00148at 152.554 kb on - strand, within MPMX20_00148at 152.563 kb on + strand, within MPMX20_00148at 152.588 kb on + strand, within MPMX20_00148at 152.596 kb on - strand, within MPMX20_00148at 152.598 kb on + strand, within MPMX20_00148at 152.624 kb on + strand, within MPMX20_00148at 152.629 kb on + strand, within MPMX20_00148at 152.632 kb on - strand, within MPMX20_00148at 152.632 kb on - strand, within MPMX20_00148at 152.632 kb on - strand, within MPMX20_00148at 152.638 kb on - strand, within MPMX20_00148at 152.696 kb on + strandat 152.704 kb on - strandat 152.706 kb on + strandat 152.713 kb on + strandat 152.714 kb on - strandat 152.718 kb on + strandat 152.845 kb on - strand, within MPMX20_00149at 152.874 kb on + strand, within MPMX20_00149at 152.882 kb on - strand, within MPMX20_00149at 152.893 kb on + strand, within MPMX20_00149at 152.911 kb on - strand, within MPMX20_00149at 152.920 kb on + strand, within MPMX20_00149at 152.935 kb on + strand, within MPMX20_00149at 152.965 kb on + strand, within MPMX20_00149at 152.973 kb on - strand, within MPMX20_00149at 153.000 kb on - strand, within MPMX20_00149at 153.011 kb on + strand, within MPMX20_00149

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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150,204 + MPMX20_00146 0.45 +1.7
150,333 - MPMX20_00146 0.54 +1.1
150,368 + MPMX20_00146 0.57 -1.1
150,373 + MPMX20_00146 0.57 -1.2
150,381 - MPMX20_00146 0.57 +1.7
150,381 - MPMX20_00146 0.57 -0.6
150,381 - MPMX20_00146 0.57 -0.6
150,381 - MPMX20_00146 0.57 -1.6
150,381 - MPMX20_00146 0.57 -1.4
150,408 + MPMX20_00146 0.59 +1.1
150,410 - MPMX20_00146 0.60 +0.1
150,431 - MPMX20_00146 0.61 +0.4
150,439 + MPMX20_00146 0.62 +1.0
150,465 + MPMX20_00146 0.63 +0.1
150,470 + MPMX20_00146 0.64 +0.7
150,475 + MPMX20_00146 0.64 +0.1
150,476 - MPMX20_00146 0.64 +0.7
150,478 - MPMX20_00146 0.64 +1.1
150,483 - MPMX20_00146 0.65 +0.2
150,506 - MPMX20_00146 0.66 -2.6
150,536 - MPMX20_00146 0.69 -2.0
150,538 + MPMX20_00146 0.69 +1.7
150,586 + MPMX20_00146 0.72 +0.1
150,637 + MPMX20_00146 0.76 -0.7
150,637 + MPMX20_00146 0.76 +0.1
150,644 + MPMX20_00146 0.76 -1.5
150,644 + MPMX20_00146 0.76 -0.4
150,644 + MPMX20_00146 0.76 +0.9
150,644 + MPMX20_00146 0.76 -1.4
150,652 - MPMX20_00146 0.77 +0.1
150,652 - MPMX20_00146 0.77 +1.7
150,652 - MPMX20_00146 0.77 -2.2
150,678 + MPMX20_00146 0.79 +0.1
150,773 - MPMX20_00146 0.85 -1.1
150,775 + MPMX20_00146 0.86 +1.0
150,777 + MPMX20_00146 0.86 -0.7
150,777 + MPMX20_00146 0.86 -1.3
150,783 - MPMX20_00146 0.86 -1.0
150,785 - MPMX20_00146 0.86 -1.3
150,785 - MPMX20_00146 0.86 -0.9
150,833 - MPMX20_00146 0.90 +1.4
150,833 - MPMX20_00146 0.90 +1.1
150,860 + +0.7
150,860 + +1.7
150,860 + +1.7
150,860 + -0.9
150,860 + +1.7
150,860 + -0.7
150,860 + +0.4
150,860 + +1.1
150,860 + -0.1
150,860 + +0.4
150,860 + -0.7
150,860 + -0.0
150,860 + +1.1
150,860 + +1.7
150,860 + -0.8
150,865 + -0.7
150,868 - +5.3
150,868 - +1.4
150,868 - -1.3
150,868 - +1.1
150,868 - -0.4
150,868 - +2.7
150,868 - -1.2
150,884 + -1.8
150,884 + +1.1
150,915 + -1.8
150,923 + +1.1
150,928 + -1.1
150,938 + +1.1
150,947 + -0.6
150,947 + -0.1
150,964 + +0.9
150,964 + +1.1
150,964 + -0.7
150,964 + -1.3
150,964 + -0.4
150,964 + -1.0
150,964 + +0.4
150,964 + +0.7
150,964 + -0.0
150,964 + -0.1
150,964 + -0.1
150,972 + -0.7
150,972 + +0.7
150,972 + +0.7
150,972 + +1.1
150,972 + +1.7
150,972 + +1.1
150,972 + -0.1
150,972 - +0.4
150,972 - -0.6
150,972 - +1.7
150,979 + +1.7
150,980 - +0.2
150,980 - -0.2
150,983 + +0.1
150,984 + -0.4
150,984 + -0.4
151,026 + +2.7
151,031 + +0.3
151,031 + -1.4
151,039 + +0.4
151,044 - -1.1
151,045 + -0.3
151,045 + +0.7
151,058 - -0.3
151,087 + -0.3
151,087 + -0.7
151,087 + +1.1
151,087 + -0.8
151,087 + +1.3
151,095 - +0.3
151,095 - +0.1
151,095 - -1.2
151,095 - -1.7
151,210 - +0.1
151,249 - +0.9
151,271 + +1.1
151,297 - MPMX20_00147 0.12 +0.1
151,297 - MPMX20_00147 0.12 -1.2
151,297 - MPMX20_00147 0.12 -0.1
151,297 - MPMX20_00147 0.12 -0.5
151,297 - MPMX20_00147 0.12 +2.7
151,303 - MPMX20_00147 0.12 -0.1
151,306 - MPMX20_00147 0.13 -0.2
151,364 - MPMX20_00147 0.20 -2.4
151,367 + MPMX20_00147 0.20 -0.9
151,369 + MPMX20_00147 0.21 +0.5
151,380 - MPMX20_00147 0.22 -1.3
151,380 - MPMX20_00147 0.22 -1.6
151,380 - MPMX20_00147 0.22 +2.1
151,380 - MPMX20_00147 0.22 -1.1
151,386 + MPMX20_00147 0.23 -0.1
151,387 - MPMX20_00147 0.23 +1.7
151,387 - MPMX20_00147 0.23 +0.1
151,394 - MPMX20_00147 0.24 +0.7
151,394 - MPMX20_00147 0.24 -0.1
151,394 - MPMX20_00147 0.24 +0.3
151,394 - MPMX20_00147 0.24 +0.7
151,394 - MPMX20_00147 0.24 +8.7
151,394 - MPMX20_00147 0.24 +0.7
151,394 - MPMX20_00147 0.24 +1.1
151,394 - MPMX20_00147 0.24 +0.4
151,394 - MPMX20_00147 0.24 +0.4
151,403 + MPMX20_00147 0.25 -1.2
151,417 + MPMX20_00147 0.26 +1.7
151,448 - MPMX20_00147 0.30 +2.1
151,448 - MPMX20_00147 0.30 +0.4
151,473 + MPMX20_00147 0.33 +1.3
151,473 + MPMX20_00147 0.33 +0.7
151,513 - MPMX20_00147 0.38 -0.1
151,515 + MPMX20_00147 0.38 -0.7
151,515 + MPMX20_00147 0.38 +1.3
151,515 + MPMX20_00147 0.38 -2.0
151,515 + MPMX20_00147 0.38 +0.3
151,523 - MPMX20_00147 0.39 +0.4
151,549 + MPMX20_00147 0.42 -0.3
151,603 - MPMX20_00147 0.49 +0.1
151,644 + MPMX20_00147 0.54 +0.1
151,644 - MPMX20_00147 0.54 -1.9
151,652 - MPMX20_00147 0.55 +0.3
151,654 + MPMX20_00147 0.55 -0.3
151,654 - MPMX20_00147 0.55 -0.6
151,659 + MPMX20_00147 0.56 +0.7
151,662 - MPMX20_00147 0.56 +1.1
151,728 - MPMX20_00147 0.64 -0.0
151,759 + MPMX20_00147 0.68 -2.2
151,759 + MPMX20_00147 0.68 -1.0
151,759 + MPMX20_00147 0.68 -1.9
151,760 - MPMX20_00147 0.68 -0.1
151,760 - MPMX20_00147 0.68 -1.0
151,767 - MPMX20_00147 0.69 -2.9
151,767 - MPMX20_00147 0.69 -0.6
151,767 - MPMX20_00147 0.69 -0.1
151,775 - MPMX20_00147 0.70 -0.7
151,811 + MPMX20_00147 0.74 +0.4
151,824 - MPMX20_00147 0.76 +0.1
151,824 - MPMX20_00147 0.76 +1.1
151,913 + MPMX20_00147 0.87 -0.1
151,969 - -1.1
151,984 + +0.3
151,991 + +0.4
151,991 + +2.7
151,991 + -1.8
151,991 + -0.3
151,991 + -1.4
151,992 + -1.0
151,992 - -1.3
151,994 + +0.7
151,994 + -2.0
151,999 - -0.2
151,999 - -1.6
151,999 - -1.4
151,999 - -0.5
151,999 - -0.6
152,012 - -1.3
152,032 + +1.1
152,066 - -0.0
152,098 - MPMX20_00148 0.11 -0.1
152,156 + MPMX20_00148 0.20 -0.5
152,156 - MPMX20_00148 0.20 +0.5
152,164 - MPMX20_00148 0.21 -0.4
152,164 - MPMX20_00148 0.21 +0.1
152,166 - MPMX20_00148 0.21 -0.2
152,199 - MPMX20_00148 0.26 -0.2
152,222 + MPMX20_00148 0.29 +1.1
152,238 + MPMX20_00148 0.31 -0.5
152,238 + MPMX20_00148 0.31 -0.7
152,245 - MPMX20_00148 0.32 -0.7
152,246 - MPMX20_00148 0.32 -2.1
152,246 - MPMX20_00148 0.32 +0.3
152,246 - MPMX20_00148 0.32 +7.4
152,253 + MPMX20_00148 0.33 -1.7
152,282 - MPMX20_00148 0.38 +2.1
152,318 + MPMX20_00148 0.43 -0.4
152,318 + MPMX20_00148 0.43 -1.4
152,374 - MPMX20_00148 0.51 -0.9
152,394 - MPMX20_00148 0.54 +1.1
152,394 - MPMX20_00148 0.54 -0.6
152,428 + MPMX20_00148 0.59 +0.1
152,428 + MPMX20_00148 0.59 +0.7
152,459 + MPMX20_00148 0.63 -0.2
152,477 - MPMX20_00148 0.66 +0.3
152,477 - MPMX20_00148 0.66 +2.7
152,486 - MPMX20_00148 0.67 -0.5
152,486 - MPMX20_00148 0.67 +0.5
152,546 + MPMX20_00148 0.76 -1.4
152,554 - MPMX20_00148 0.77 -0.9
152,554 - MPMX20_00148 0.77 +1.1
152,554 - MPMX20_00148 0.77 +0.7
152,554 - MPMX20_00148 0.77 -0.4
152,563 + MPMX20_00148 0.78 +0.1
152,588 + MPMX20_00148 0.82 +2.7
152,596 - MPMX20_00148 0.83 +4.9
152,598 + MPMX20_00148 0.83 -0.8
152,624 + MPMX20_00148 0.87 -0.9
152,629 + MPMX20_00148 0.88 +1.1
152,632 - MPMX20_00148 0.88 +0.0
152,632 - MPMX20_00148 0.88 -0.7
152,632 - MPMX20_00148 0.88 +1.7
152,638 - MPMX20_00148 0.89 +0.3
152,696 + -0.5
152,704 - -0.6
152,706 + -0.3
152,713 + +1.4
152,714 - -1.0
152,718 + -1.3
152,845 - MPMX20_00149 0.16 +2.1
152,874 + MPMX20_00149 0.19 +0.7
152,882 - MPMX20_00149 0.20 -0.3
152,893 + MPMX20_00149 0.21 +0.7
152,911 - MPMX20_00149 0.23 +0.4
152,920 + MPMX20_00149 0.25 -1.3
152,935 + MPMX20_00149 0.26 -0.6
152,965 + MPMX20_00149 0.30 +0.2
152,973 - MPMX20_00149 0.31 +0.6
153,000 - MPMX20_00149 0.34 -2.0
153,011 + MPMX20_00149 0.35 +0.6

Or see this region's nucleotide sequence