Experiment: M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03773 and MPMX20_03774 are separated by 47 nucleotides MPMX20_03774 and MPMX20_03775 are separated by 91 nucleotides MPMX20_03775 and MPMX20_03776 are separated by 146 nucleotides
MPMX20_03773: MPMX20_03773 - HTH-type transcriptional regulator ArgP, at 3,976,192 to 3,977,085
_03773
MPMX20_03774: MPMX20_03774 - 26 kDa periplasmic immunogenic protein, at 3,977,133 to 3,977,873
_03774
MPMX20_03775: MPMX20_03775 - Arginine exporter protein ArgO, at 3,977,965 to 3,978,600
_03775
MPMX20_03776: MPMX20_03776 - Small-conductance mechanosensitive channel, at 3,978,747 to 3,979,601
_03776
Position (kb)
3977
3978
3979 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3977.060 kb on + strand at 3977.060 kb on + strand at 3977.068 kb on - strand at 3977.068 kb on - strand at 3977.079 kb on + strand at 3977.108 kb on - strand at 3977.196 kb on + strand at 3977.240 kb on + strand, within MPMX20_03774 at 3977.280 kb on + strand, within MPMX20_03774 at 3977.320 kb on + strand, within MPMX20_03774 at 3977.343 kb on - strand, within MPMX20_03774 at 3977.525 kb on + strand, within MPMX20_03774 at 3977.533 kb on - strand, within MPMX20_03774 at 3977.533 kb on - strand, within MPMX20_03774 at 3977.611 kb on - strand, within MPMX20_03774 at 3977.611 kb on - strand, within MPMX20_03774 at 3977.632 kb on + strand, within MPMX20_03774 at 3977.836 kb on - strand at 3977.928 kb on - strand at 3977.935 kb on - strand at 3977.949 kb on + strand at 3978.009 kb on + strand at 3978.150 kb on - strand, within MPMX20_03775 at 3978.156 kb on - strand, within MPMX20_03775 at 3978.176 kb on + strand, within MPMX20_03775 at 3978.184 kb on - strand, within MPMX20_03775 at 3978.184 kb on - strand, within MPMX20_03775 at 3978.207 kb on + strand, within MPMX20_03775 at 3978.207 kb on + strand, within MPMX20_03775 at 3978.207 kb on - strand, within MPMX20_03775 at 3978.207 kb on - strand, within MPMX20_03775 at 3978.239 kb on + strand, within MPMX20_03775 at 3978.247 kb on - strand, within MPMX20_03775 at 3978.283 kb on - strand, within MPMX20_03775 at 3978.375 kb on + strand, within MPMX20_03775 at 3978.399 kb on + strand, within MPMX20_03775 at 3978.456 kb on - strand, within MPMX20_03775 at 3978.470 kb on + strand, within MPMX20_03775 at 3978.470 kb on + strand, within MPMX20_03775 at 3978.475 kb on + strand, within MPMX20_03775 at 3978.488 kb on - strand, within MPMX20_03775 at 3978.501 kb on + strand, within MPMX20_03775 at 3978.546 kb on + strand at 3978.547 kb on + strand at 3978.623 kb on + strand at 3978.723 kb on + strand at 3978.766 kb on + strand at 3978.786 kb on - strand at 3978.793 kb on - strand at 3978.809 kb on - strand at 3978.834 kb on - strand, within MPMX20_03776 at 3978.834 kb on - strand, within MPMX20_03776 at 3978.837 kb on + strand, within MPMX20_03776 at 3978.845 kb on - strand, within MPMX20_03776 at 3978.845 kb on - strand, within MPMX20_03776 at 3978.936 kb on + strand, within MPMX20_03776 at 3978.944 kb on - strand, within MPMX20_03776 at 3978.956 kb on + strand, within MPMX20_03776 at 3979.181 kb on - strand, within MPMX20_03776 at 3979.190 kb on + strand, within MPMX20_03776 at 3979.193 kb on - strand, within MPMX20_03776 at 3979.205 kb on - strand, within MPMX20_03776 at 3979.217 kb on + strand, within MPMX20_03776 at 3979.217 kb on + strand, within MPMX20_03776 at 3979.217 kb on + strand, within MPMX20_03776 at 3979.334 kb on + strand, within MPMX20_03776 at 3979.349 kb on - strand, within MPMX20_03776 at 3979.354 kb on - strand, within MPMX20_03776 at 3979.365 kb on + strand, within MPMX20_03776 at 3979.366 kb on - strand, within MPMX20_03776 at 3979.383 kb on + strand, within MPMX20_03776 at 3979.404 kb on + strand, within MPMX20_03776 at 3979.404 kb on + strand, within MPMX20_03776 at 3979.426 kb on + strand, within MPMX20_03776 at 3979.433 kb on + strand, within MPMX20_03776 at 3979.441 kb on - strand, within MPMX20_03776 at 3979.476 kb on + strand, within MPMX20_03776 at 3979.484 kb on - strand, within MPMX20_03776 at 3979.496 kb on - strand, within MPMX20_03776 at 3979.519 kb on + strand at 3979.525 kb on + strand at 3979.525 kb on - strand at 3979.525 kb on - strand at 3979.527 kb on - strand at 3979.586 kb on - strand at 3979.586 kb on - strand at 3979.595 kb on - strand at 3979.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,977,060 + -0.4 3,977,060 + -0.5 3,977,068 - +0.7 3,977,068 - -1.0 3,977,079 + +0.8 3,977,108 - -0.6 3,977,196 + -2.0 3,977,240 + MPMX20_03774 0.14 -0.1 3,977,280 + MPMX20_03774 0.20 +1.4 3,977,320 + MPMX20_03774 0.25 +0.7 3,977,343 - MPMX20_03774 0.28 -0.2 3,977,525 + MPMX20_03774 0.53 +4.6 3,977,533 - MPMX20_03774 0.54 -0.6 3,977,533 - MPMX20_03774 0.54 -0.8 3,977,611 - MPMX20_03774 0.65 -2.1 3,977,611 - MPMX20_03774 0.65 +0.1 3,977,632 + MPMX20_03774 0.67 -0.3 3,977,836 - +2.4 3,977,928 - +0.9 3,977,935 - +0.0 3,977,949 + -0.4 3,978,009 + -1.6 3,978,150 - MPMX20_03775 0.29 +0.2 3,978,156 - MPMX20_03775 0.30 -1.5 3,978,176 + MPMX20_03775 0.33 +0.1 3,978,184 - MPMX20_03775 0.34 -0.6 3,978,184 - MPMX20_03775 0.34 -0.2 3,978,207 + MPMX20_03775 0.38 -1.6 3,978,207 + MPMX20_03775 0.38 +0.4 3,978,207 - MPMX20_03775 0.38 -1.4 3,978,207 - MPMX20_03775 0.38 +0.1 3,978,239 + MPMX20_03775 0.43 +0.9 3,978,247 - MPMX20_03775 0.44 -0.2 3,978,283 - MPMX20_03775 0.50 -0.9 3,978,375 + MPMX20_03775 0.64 -1.4 3,978,399 + MPMX20_03775 0.68 +0.0 3,978,456 - MPMX20_03775 0.77 +2.4 3,978,470 + MPMX20_03775 0.79 -0.6 3,978,470 + MPMX20_03775 0.79 -0.8 3,978,475 + MPMX20_03775 0.80 +0.9 3,978,488 - MPMX20_03775 0.82 -1.2 3,978,501 + MPMX20_03775 0.84 +0.4 3,978,546 + +1.4 3,978,547 + -0.6 3,978,623 + -0.8 3,978,723 + -0.6 3,978,766 + -0.5 3,978,786 - -1.7 3,978,793 - -2.1 3,978,809 - +0.1 3,978,834 - MPMX20_03776 0.10 -1.5 3,978,834 - MPMX20_03776 0.10 -0.9 3,978,837 + MPMX20_03776 0.11 -0.1 3,978,845 - MPMX20_03776 0.11 -1.4 3,978,845 - MPMX20_03776 0.11 -1.9 3,978,936 + MPMX20_03776 0.22 +0.1 3,978,944 - MPMX20_03776 0.23 -0.6 3,978,956 + MPMX20_03776 0.24 +0.3 3,979,181 - MPMX20_03776 0.51 -1.4 3,979,190 + MPMX20_03776 0.52 +0.1 3,979,193 - MPMX20_03776 0.52 -0.4 3,979,205 - MPMX20_03776 0.54 +0.1 3,979,217 + MPMX20_03776 0.55 -1.1 3,979,217 + MPMX20_03776 0.55 -1.0 3,979,217 + MPMX20_03776 0.55 -0.7 3,979,334 + MPMX20_03776 0.69 -2.3 3,979,349 - MPMX20_03776 0.70 -0.3 3,979,354 - MPMX20_03776 0.71 -0.3 3,979,365 + MPMX20_03776 0.72 -0.7 3,979,366 - MPMX20_03776 0.72 -0.1 3,979,383 + MPMX20_03776 0.74 -2.0 3,979,404 + MPMX20_03776 0.77 +0.0 3,979,404 + MPMX20_03776 0.77 -0.1 3,979,426 + MPMX20_03776 0.79 +0.4 3,979,433 + MPMX20_03776 0.80 +1.2 3,979,441 - MPMX20_03776 0.81 +0.7 3,979,476 + MPMX20_03776 0.85 +0.3 3,979,484 - MPMX20_03776 0.86 -0.9 3,979,496 - MPMX20_03776 0.88 +0.1 3,979,519 + +0.6 3,979,525 + +0.9 3,979,525 - -1.0 3,979,525 - +1.1 3,979,527 - -0.2 3,979,586 - +0.1 3,979,586 - +1.2 3,979,595 - -0.6 3,979,598 - -1.0
Or see this region's nucleotide sequence