Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03775

Experiment: M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03773 and MPMX20_03774 are separated by 47 nucleotidesMPMX20_03774 and MPMX20_03775 are separated by 91 nucleotidesMPMX20_03775 and MPMX20_03776 are separated by 146 nucleotides MPMX20_03773: MPMX20_03773 - HTH-type transcriptional regulator ArgP, at 3,976,192 to 3,977,085 _03773 MPMX20_03774: MPMX20_03774 - 26 kDa periplasmic immunogenic protein, at 3,977,133 to 3,977,873 _03774 MPMX20_03775: MPMX20_03775 - Arginine exporter protein ArgO, at 3,977,965 to 3,978,600 _03775 MPMX20_03776: MPMX20_03776 - Small-conductance mechanosensitive channel, at 3,978,747 to 3,979,601 _03776 Position (kb) 3977 3978 3979Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3977.060 kb on + strandat 3977.060 kb on + strandat 3977.068 kb on - strandat 3977.068 kb on - strandat 3977.079 kb on + strandat 3977.108 kb on - strandat 3977.196 kb on + strandat 3977.240 kb on + strand, within MPMX20_03774at 3977.280 kb on + strand, within MPMX20_03774at 3977.320 kb on + strand, within MPMX20_03774at 3977.343 kb on - strand, within MPMX20_03774at 3977.525 kb on + strand, within MPMX20_03774at 3977.533 kb on - strand, within MPMX20_03774at 3977.533 kb on - strand, within MPMX20_03774at 3977.611 kb on - strand, within MPMX20_03774at 3977.611 kb on - strand, within MPMX20_03774at 3977.632 kb on + strand, within MPMX20_03774at 3977.836 kb on - strandat 3977.928 kb on - strandat 3977.935 kb on - strandat 3977.949 kb on + strandat 3978.009 kb on + strandat 3978.150 kb on - strand, within MPMX20_03775at 3978.156 kb on - strand, within MPMX20_03775at 3978.176 kb on + strand, within MPMX20_03775at 3978.184 kb on - strand, within MPMX20_03775at 3978.184 kb on - strand, within MPMX20_03775at 3978.207 kb on + strand, within MPMX20_03775at 3978.207 kb on + strand, within MPMX20_03775at 3978.207 kb on - strand, within MPMX20_03775at 3978.207 kb on - strand, within MPMX20_03775at 3978.239 kb on + strand, within MPMX20_03775at 3978.247 kb on - strand, within MPMX20_03775at 3978.283 kb on - strand, within MPMX20_03775at 3978.375 kb on + strand, within MPMX20_03775at 3978.399 kb on + strand, within MPMX20_03775at 3978.456 kb on - strand, within MPMX20_03775at 3978.470 kb on + strand, within MPMX20_03775at 3978.470 kb on + strand, within MPMX20_03775at 3978.475 kb on + strand, within MPMX20_03775at 3978.488 kb on - strand, within MPMX20_03775at 3978.501 kb on + strand, within MPMX20_03775at 3978.546 kb on + strandat 3978.547 kb on + strandat 3978.623 kb on + strandat 3978.723 kb on + strandat 3978.766 kb on + strandat 3978.786 kb on - strandat 3978.793 kb on - strandat 3978.809 kb on - strandat 3978.834 kb on - strand, within MPMX20_03776at 3978.834 kb on - strand, within MPMX20_03776at 3978.837 kb on + strand, within MPMX20_03776at 3978.845 kb on - strand, within MPMX20_03776at 3978.845 kb on - strand, within MPMX20_03776at 3978.936 kb on + strand, within MPMX20_03776at 3978.944 kb on - strand, within MPMX20_03776at 3978.956 kb on + strand, within MPMX20_03776at 3979.181 kb on - strand, within MPMX20_03776at 3979.190 kb on + strand, within MPMX20_03776at 3979.193 kb on - strand, within MPMX20_03776at 3979.205 kb on - strand, within MPMX20_03776at 3979.217 kb on + strand, within MPMX20_03776at 3979.217 kb on + strand, within MPMX20_03776at 3979.217 kb on + strand, within MPMX20_03776at 3979.334 kb on + strand, within MPMX20_03776at 3979.349 kb on - strand, within MPMX20_03776at 3979.354 kb on - strand, within MPMX20_03776at 3979.365 kb on + strand, within MPMX20_03776at 3979.366 kb on - strand, within MPMX20_03776at 3979.383 kb on + strand, within MPMX20_03776at 3979.404 kb on + strand, within MPMX20_03776at 3979.404 kb on + strand, within MPMX20_03776at 3979.426 kb on + strand, within MPMX20_03776at 3979.433 kb on + strand, within MPMX20_03776at 3979.441 kb on - strand, within MPMX20_03776at 3979.476 kb on + strand, within MPMX20_03776at 3979.484 kb on - strand, within MPMX20_03776at 3979.496 kb on - strand, within MPMX20_03776at 3979.519 kb on + strandat 3979.525 kb on + strandat 3979.525 kb on - strandat 3979.525 kb on - strandat 3979.527 kb on - strandat 3979.586 kb on - strandat 3979.586 kb on - strandat 3979.595 kb on - strandat 3979.598 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus pumilus TBS_065 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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3,977,060 + -0.4
3,977,060 + -0.5
3,977,068 - +0.7
3,977,068 - -1.0
3,977,079 + +0.8
3,977,108 - -0.6
3,977,196 + -2.0
3,977,240 + MPMX20_03774 0.14 -0.1
3,977,280 + MPMX20_03774 0.20 +1.4
3,977,320 + MPMX20_03774 0.25 +0.7
3,977,343 - MPMX20_03774 0.28 -0.2
3,977,525 + MPMX20_03774 0.53 +4.6
3,977,533 - MPMX20_03774 0.54 -0.6
3,977,533 - MPMX20_03774 0.54 -0.8
3,977,611 - MPMX20_03774 0.65 -2.1
3,977,611 - MPMX20_03774 0.65 +0.1
3,977,632 + MPMX20_03774 0.67 -0.3
3,977,836 - +2.4
3,977,928 - +0.9
3,977,935 - +0.0
3,977,949 + -0.4
3,978,009 + -1.6
3,978,150 - MPMX20_03775 0.29 +0.2
3,978,156 - MPMX20_03775 0.30 -1.5
3,978,176 + MPMX20_03775 0.33 +0.1
3,978,184 - MPMX20_03775 0.34 -0.6
3,978,184 - MPMX20_03775 0.34 -0.2
3,978,207 + MPMX20_03775 0.38 -1.6
3,978,207 + MPMX20_03775 0.38 +0.4
3,978,207 - MPMX20_03775 0.38 -1.4
3,978,207 - MPMX20_03775 0.38 +0.1
3,978,239 + MPMX20_03775 0.43 +0.9
3,978,247 - MPMX20_03775 0.44 -0.2
3,978,283 - MPMX20_03775 0.50 -0.9
3,978,375 + MPMX20_03775 0.64 -1.4
3,978,399 + MPMX20_03775 0.68 +0.0
3,978,456 - MPMX20_03775 0.77 +2.4
3,978,470 + MPMX20_03775 0.79 -0.6
3,978,470 + MPMX20_03775 0.79 -0.8
3,978,475 + MPMX20_03775 0.80 +0.9
3,978,488 - MPMX20_03775 0.82 -1.2
3,978,501 + MPMX20_03775 0.84 +0.4
3,978,546 + +1.4
3,978,547 + -0.6
3,978,623 + -0.8
3,978,723 + -0.6
3,978,766 + -0.5
3,978,786 - -1.7
3,978,793 - -2.1
3,978,809 - +0.1
3,978,834 - MPMX20_03776 0.10 -1.5
3,978,834 - MPMX20_03776 0.10 -0.9
3,978,837 + MPMX20_03776 0.11 -0.1
3,978,845 - MPMX20_03776 0.11 -1.4
3,978,845 - MPMX20_03776 0.11 -1.9
3,978,936 + MPMX20_03776 0.22 +0.1
3,978,944 - MPMX20_03776 0.23 -0.6
3,978,956 + MPMX20_03776 0.24 +0.3
3,979,181 - MPMX20_03776 0.51 -1.4
3,979,190 + MPMX20_03776 0.52 +0.1
3,979,193 - MPMX20_03776 0.52 -0.4
3,979,205 - MPMX20_03776 0.54 +0.1
3,979,217 + MPMX20_03776 0.55 -1.1
3,979,217 + MPMX20_03776 0.55 -1.0
3,979,217 + MPMX20_03776 0.55 -0.7
3,979,334 + MPMX20_03776 0.69 -2.3
3,979,349 - MPMX20_03776 0.70 -0.3
3,979,354 - MPMX20_03776 0.71 -0.3
3,979,365 + MPMX20_03776 0.72 -0.7
3,979,366 - MPMX20_03776 0.72 -0.1
3,979,383 + MPMX20_03776 0.74 -2.0
3,979,404 + MPMX20_03776 0.77 +0.0
3,979,404 + MPMX20_03776 0.77 -0.1
3,979,426 + MPMX20_03776 0.79 +0.4
3,979,433 + MPMX20_03776 0.80 +1.2
3,979,441 - MPMX20_03776 0.81 +0.7
3,979,476 + MPMX20_03776 0.85 +0.3
3,979,484 - MPMX20_03776 0.86 -0.9
3,979,496 - MPMX20_03776 0.88 +0.1
3,979,519 + +0.6
3,979,525 + +0.9
3,979,525 - -1.0
3,979,525 - +1.1
3,979,527 - -0.2
3,979,586 - +0.1
3,979,586 - +1.2
3,979,595 - -0.6
3,979,598 - -1.0

Or see this region's nucleotide sequence