Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02795

Experiment: 0.1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02793 and MPMX20_02794 are separated by 16 nucleotidesMPMX20_02794 and MPMX20_02795 are separated by 12 nucleotidesMPMX20_02795 and MPMX20_02796 are separated by 430 nucleotides MPMX20_02793: MPMX20_02793 - hypothetical protein, at 2,950,962 to 2,951,723 _02793 MPMX20_02794: MPMX20_02794 - hypothetical protein, at 2,951,740 to 2,952,288 _02794 MPMX20_02795: MPMX20_02795 - hypothetical protein, at 2,952,301 to 2,952,873 _02795 MPMX20_02796: MPMX20_02796 - C4-dicarboxylate transport protein, at 2,953,304 to 2,954,563 _02796 Position (kb) 2952 2953Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8 9at 2951.323 kb on + strand, within MPMX20_02793at 2951.395 kb on - strand, within MPMX20_02793at 2951.402 kb on + strand, within MPMX20_02793at 2951.402 kb on + strand, within MPMX20_02793at 2951.404 kb on + strand, within MPMX20_02793at 2951.404 kb on + strand, within MPMX20_02793at 2951.404 kb on + strand, within MPMX20_02793at 2951.443 kb on - strand, within MPMX20_02793at 2951.487 kb on - strand, within MPMX20_02793at 2951.533 kb on + strand, within MPMX20_02793at 2951.541 kb on - strand, within MPMX20_02793at 2951.628 kb on + strand, within MPMX20_02793at 2951.695 kb on + strandat 2951.703 kb on - strandat 2951.760 kb on - strandat 2951.766 kb on + strandat 2951.774 kb on - strandat 2951.787 kb on + strandat 2951.787 kb on + strandat 2951.795 kb on - strand, within MPMX20_02794at 2951.834 kb on - strand, within MPMX20_02794at 2951.859 kb on - strand, within MPMX20_02794at 2951.909 kb on + strand, within MPMX20_02794at 2951.969 kb on + strand, within MPMX20_02794at 2951.969 kb on + strand, within MPMX20_02794at 2952.001 kb on - strand, within MPMX20_02794at 2952.026 kb on + strand, within MPMX20_02794at 2952.079 kb on - strand, within MPMX20_02794at 2952.142 kb on + strand, within MPMX20_02794at 2952.217 kb on + strand, within MPMX20_02794at 2952.249 kb on + strandat 2952.283 kb on + strandat 2952.291 kb on - strandat 2952.291 kb on - strandat 2952.314 kb on - strandat 2952.359 kb on - strand, within MPMX20_02795at 2952.390 kb on + strand, within MPMX20_02795at 2952.392 kb on + strand, within MPMX20_02795at 2952.482 kb on + strand, within MPMX20_02795at 2952.488 kb on + strand, within MPMX20_02795at 2952.496 kb on - strand, within MPMX20_02795at 2952.511 kb on - strand, within MPMX20_02795at 2952.524 kb on - strand, within MPMX20_02795at 2952.536 kb on - strand, within MPMX20_02795at 2952.545 kb on - strand, within MPMX20_02795at 2952.605 kb on - strand, within MPMX20_02795at 2952.652 kb on + strand, within MPMX20_02795at 2952.652 kb on + strand, within MPMX20_02795at 2952.692 kb on - strand, within MPMX20_02795at 2952.707 kb on + strand, within MPMX20_02795at 2952.734 kb on + strand, within MPMX20_02795at 2952.766 kb on + strand, within MPMX20_02795at 2952.819 kb on - strandat 2952.821 kb on - strandat 2952.827 kb on + strandat 2952.840 kb on + strandat 2952.840 kb on + strandat 2952.892 kb on - strandat 2953.017 kb on + strandat 2953.017 kb on + strandat 2953.017 kb on + strandat 2953.025 kb on - strandat 2953.025 kb on - strandat 2953.025 kb on - strandat 2953.025 kb on - strandat 2953.106 kb on + strandat 2953.107 kb on + strandat 2953.114 kb on - strandat 2953.270 kb on + strandat 2953.311 kb on + strandat 2953.319 kb on - strandat 2953.389 kb on + strandat 2953.410 kb on - strandat 2953.488 kb on - strand, within MPMX20_02796at 2953.493 kb on - strand, within MPMX20_02796at 2953.514 kb on - strand, within MPMX20_02796at 2953.674 kb on + strand, within MPMX20_02796at 2953.674 kb on + strand, within MPMX20_02796at 2953.845 kb on + strand, within MPMX20_02796

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,951,323 + MPMX20_02793 0.47 -0.1
2,951,395 - MPMX20_02793 0.57 -0.6
2,951,402 + MPMX20_02793 0.58 +1.5
2,951,402 + MPMX20_02793 0.58 +0.1
2,951,404 + MPMX20_02793 0.58 -1.7
2,951,404 + MPMX20_02793 0.58 +0.1
2,951,404 + MPMX20_02793 0.58 -0.6
2,951,443 - MPMX20_02793 0.63 -0.7
2,951,487 - MPMX20_02793 0.69 -0.6
2,951,533 + MPMX20_02793 0.75 -1.0
2,951,541 - MPMX20_02793 0.76 +1.5
2,951,628 + MPMX20_02793 0.87 +0.5
2,951,695 + -0.6
2,951,703 - +0.3
2,951,760 - -0.6
2,951,766 + +0.1
2,951,774 - -0.2
2,951,787 + -0.3
2,951,787 + -2.1
2,951,795 - MPMX20_02794 0.10 +0.4
2,951,834 - MPMX20_02794 0.17 -0.2
2,951,859 - MPMX20_02794 0.22 +0.3
2,951,909 + MPMX20_02794 0.31 +0.1
2,951,969 + MPMX20_02794 0.42 +0.7
2,951,969 + MPMX20_02794 0.42 -0.4
2,952,001 - MPMX20_02794 0.48 +0.0
2,952,026 + MPMX20_02794 0.52 -0.4
2,952,079 - MPMX20_02794 0.62 +0.1
2,952,142 + MPMX20_02794 0.73 +0.9
2,952,217 + MPMX20_02794 0.87 -1.1
2,952,249 + -1.2
2,952,283 + +0.7
2,952,291 - -0.8
2,952,291 - +0.6
2,952,314 - -0.6
2,952,359 - MPMX20_02795 0.10 +0.3
2,952,390 + MPMX20_02795 0.16 -0.1
2,952,392 + MPMX20_02795 0.16 -0.0
2,952,482 + MPMX20_02795 0.32 +3.1
2,952,488 + MPMX20_02795 0.33 +8.9
2,952,496 - MPMX20_02795 0.34 -0.1
2,952,511 - MPMX20_02795 0.37 +1.3
2,952,524 - MPMX20_02795 0.39 +3.7
2,952,536 - MPMX20_02795 0.41 -0.1
2,952,545 - MPMX20_02795 0.43 +1.1
2,952,605 - MPMX20_02795 0.53 -0.9
2,952,652 + MPMX20_02795 0.61 -0.7
2,952,652 + MPMX20_02795 0.61 +0.3
2,952,692 - MPMX20_02795 0.68 +0.6
2,952,707 + MPMX20_02795 0.71 +0.1
2,952,734 + MPMX20_02795 0.76 +0.1
2,952,766 + MPMX20_02795 0.81 -0.7
2,952,819 - +0.5
2,952,821 - -1.5
2,952,827 + -1.3
2,952,840 + +0.6
2,952,840 + +0.3
2,952,892 - +1.1
2,953,017 + -0.9
2,953,017 + +2.1
2,953,017 + +1.3
2,953,025 - +0.1
2,953,025 - -0.7
2,953,025 - +1.1
2,953,025 - -0.2
2,953,106 + -0.4
2,953,107 + +1.7
2,953,114 - -0.1
2,953,270 + -0.1
2,953,311 + -0.4
2,953,319 - +1.0
2,953,389 + -1.6
2,953,410 - +0.8
2,953,488 - MPMX20_02796 0.15 -0.1
2,953,493 - MPMX20_02796 0.15 -1.0
2,953,514 - MPMX20_02796 0.17 -0.1
2,953,674 + MPMX20_02796 0.29 +0.3
2,953,674 + MPMX20_02796 0.29 +0.9
2,953,845 + MPMX20_02796 0.43 +0.1

Or see this region's nucleotide sequence