Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04141 and MPMX20_04142 are separated by 377 nucleotides MPMX20_04142 and MPMX20_04143 are separated by 110 nucleotides MPMX20_04143 and MPMX20_04144 are separated by 67 nucleotides MPMX20_04144 and MPMX20_04145 are separated by 45 nucleotides
MPMX20_04141: MPMX20_04141 - Arginine repressor, at 4,341,797 to 4,342,267
_04141
MPMX20_04142: MPMX20_04142 - Multiple stress resistance protein BhsA, at 4,342,645 to 4,342,908
_04142
MPMX20_04143: MPMX20_04143 - hypothetical protein, at 4,343,019 to 4,343,285
_04143
MPMX20_04144: MPMX20_04144 - putative protein YhcO, at 4,343,353 to 4,343,625
_04144
MPMX20_04145: MPMX20_04145 - Glutarate-semialdehyde dehydrogenase, at 4,343,671 to 4,345,125
_04145
Position (kb)
4343
4344 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 4342.029 kb on + strand, within MPMX20_04141 at 4342.029 kb on + strand, within MPMX20_04141 at 4342.082 kb on + strand, within MPMX20_04141 at 4342.090 kb on - strand, within MPMX20_04141 at 4342.107 kb on + strand, within MPMX20_04141 at 4342.141 kb on + strand, within MPMX20_04141 at 4342.141 kb on + strand, within MPMX20_04141 at 4342.147 kb on + strand, within MPMX20_04141 at 4342.147 kb on + strand, within MPMX20_04141 at 4342.147 kb on + strand, within MPMX20_04141 at 4342.147 kb on + strand, within MPMX20_04141 at 4342.155 kb on - strand, within MPMX20_04141 at 4342.155 kb on - strand, within MPMX20_04141 at 4342.246 kb on - strand at 4342.264 kb on + strand at 4342.308 kb on - strand at 4342.327 kb on + strand at 4342.335 kb on - strand at 4342.335 kb on - strand at 4342.335 kb on - strand at 4342.335 kb on - strand at 4342.466 kb on - strand at 4342.642 kb on - strand at 4342.690 kb on - strand, within MPMX20_04142 at 4342.746 kb on - strand, within MPMX20_04142 at 4342.777 kb on + strand, within MPMX20_04142 at 4342.827 kb on + strand, within MPMX20_04142 at 4342.835 kb on - strand, within MPMX20_04142 at 4342.836 kb on - strand, within MPMX20_04142 at 4342.863 kb on + strand, within MPMX20_04142 at 4342.863 kb on - strand, within MPMX20_04142 at 4342.871 kb on - strand, within MPMX20_04142 at 4342.875 kb on + strand, within MPMX20_04142 at 4342.875 kb on + strand, within MPMX20_04142 at 4342.878 kb on - strand, within MPMX20_04142 at 4342.878 kb on - strand, within MPMX20_04142 at 4342.897 kb on - strand at 4342.899 kb on - strand at 4342.941 kb on - strand at 4342.969 kb on + strand at 4342.969 kb on + strand at 4343.083 kb on + strand, within MPMX20_04143 at 4343.174 kb on - strand, within MPMX20_04143 at 4343.192 kb on + strand, within MPMX20_04143 at 4343.230 kb on + strand, within MPMX20_04143 at 4343.240 kb on + strand, within MPMX20_04143 at 4343.248 kb on - strand, within MPMX20_04143 at 4343.252 kb on + strand, within MPMX20_04143 at 4343.255 kb on - strand, within MPMX20_04143 at 4343.259 kb on - strand at 4343.279 kb on - strand at 4343.315 kb on + strand at 4343.323 kb on - strand at 4343.634 kb on + strand at 4343.639 kb on + strand at 4343.639 kb on + strand at 4343.647 kb on - strand at 4343.647 kb on - strand at 4343.647 kb on - strand at 4343.647 kb on - strand at 4343.647 kb on - strand at 4343.783 kb on + strand at 4343.786 kb on - strand at 4343.877 kb on - strand, within MPMX20_04145 at 4343.918 kb on - strand, within MPMX20_04145 at 4343.942 kb on - strand, within MPMX20_04145 at 4343.952 kb on - strand, within MPMX20_04145 at 4343.963 kb on - strand, within MPMX20_04145 at 4344.045 kb on - strand, within MPMX20_04145 at 4344.084 kb on - strand, within MPMX20_04145 at 4344.105 kb on + strand, within MPMX20_04145 at 4344.161 kb on - strand, within MPMX20_04145 at 4344.164 kb on + strand, within MPMX20_04145 at 4344.172 kb on - strand, within MPMX20_04145 at 4344.238 kb on + strand, within MPMX20_04145 at 4344.249 kb on + strand, within MPMX20_04145 at 4344.259 kb on + strand, within MPMX20_04145
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,342,029 + MPMX20_04141 0.49 -0.6 4,342,029 + MPMX20_04141 0.49 +0.2 4,342,082 + MPMX20_04141 0.61 +0.6 4,342,090 - MPMX20_04141 0.62 -1.3 4,342,107 + MPMX20_04141 0.66 +0.6 4,342,141 + MPMX20_04141 0.73 +0.2 4,342,141 + MPMX20_04141 0.73 +0.4 4,342,147 + MPMX20_04141 0.74 +0.6 4,342,147 + MPMX20_04141 0.74 -1.7 4,342,147 + MPMX20_04141 0.74 -0.3 4,342,147 + MPMX20_04141 0.74 -0.2 4,342,155 - MPMX20_04141 0.76 -2.0 4,342,155 - MPMX20_04141 0.76 +1.2 4,342,246 - -0.6 4,342,264 + +0.1 4,342,308 - -2.0 4,342,327 + +0.4 4,342,335 - +0.6 4,342,335 - +0.8 4,342,335 - -1.0 4,342,335 - +0.3 4,342,466 - +0.6 4,342,642 - +1.2 4,342,690 - MPMX20_04142 0.17 -0.7 4,342,746 - MPMX20_04142 0.38 -1.7 4,342,777 + MPMX20_04142 0.50 +0.1 4,342,827 + MPMX20_04142 0.69 -0.5 4,342,835 - MPMX20_04142 0.72 +1.0 4,342,836 - MPMX20_04142 0.72 +1.9 4,342,863 + MPMX20_04142 0.83 -0.3 4,342,863 - MPMX20_04142 0.83 -0.7 4,342,871 - MPMX20_04142 0.86 +0.1 4,342,875 + MPMX20_04142 0.87 -1.5 4,342,875 + MPMX20_04142 0.87 +0.2 4,342,878 - MPMX20_04142 0.88 -0.4 4,342,878 - MPMX20_04142 0.88 -0.5 4,342,897 - -0.4 4,342,899 - +1.2 4,342,941 - -1.6 4,342,969 + +0.6 4,342,969 + -0.7 4,343,083 + MPMX20_04143 0.24 -1.3 4,343,174 - MPMX20_04143 0.58 -1.1 4,343,192 + MPMX20_04143 0.65 +0.7 4,343,230 + MPMX20_04143 0.79 -0.0 4,343,240 + MPMX20_04143 0.83 +6.3 4,343,248 - MPMX20_04143 0.86 +2.6 4,343,252 + MPMX20_04143 0.87 -0.6 4,343,255 - MPMX20_04143 0.88 -2.6 4,343,259 - -2.8 4,343,279 - -0.6 4,343,315 + -1.7 4,343,323 - +1.8 4,343,634 + -0.3 4,343,639 + -0.1 4,343,639 + -0.4 4,343,647 - -0.3 4,343,647 - -0.2 4,343,647 - -0.0 4,343,647 - +2.0 4,343,647 - +0.6 4,343,783 + -1.5 4,343,786 - +0.8 4,343,877 - MPMX20_04145 0.14 +3.2 4,343,918 - MPMX20_04145 0.17 +0.3 4,343,942 - MPMX20_04145 0.19 +0.6 4,343,952 - MPMX20_04145 0.19 +1.0 4,343,963 - MPMX20_04145 0.20 -0.4 4,344,045 - MPMX20_04145 0.26 -0.1 4,344,084 - MPMX20_04145 0.28 -1.6 4,344,105 + MPMX20_04145 0.30 +0.5 4,344,161 - MPMX20_04145 0.34 -0.8 4,344,164 + MPMX20_04145 0.34 +0.8 4,344,172 - MPMX20_04145 0.34 -0.9 4,344,238 + MPMX20_04145 0.39 -1.0 4,344,249 + MPMX20_04145 0.40 +0.5 4,344,259 + MPMX20_04145 0.40 -0.0
Or see this region's nucleotide sequence