Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02595

Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02594 and MPMX20_02595 are separated by 21 nucleotidesMPMX20_02595 and MPMX20_02596 are separated by 48 nucleotides MPMX20_02594: MPMX20_02594 - putative NTE family protein, at 2,732,387 to 2,733,328 _02594 MPMX20_02595: MPMX20_02595 - hypothetical protein, at 2,733,350 to 2,733,862 _02595 MPMX20_02596: MPMX20_02596 - Formyltetrahydrofolate deformylase, at 2,733,911 to 2,734,753 _02596 Position (kb) 2733 2734Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2732.414 kb on - strandat 2732.427 kb on - strandat 2732.447 kb on - strandat 2732.482 kb on - strand, within MPMX20_02594at 2732.502 kb on + strand, within MPMX20_02594at 2732.502 kb on + strand, within MPMX20_02594at 2732.539 kb on - strand, within MPMX20_02594at 2732.558 kb on - strand, within MPMX20_02594at 2732.572 kb on - strand, within MPMX20_02594at 2732.583 kb on - strand, within MPMX20_02594at 2732.639 kb on + strand, within MPMX20_02594at 2732.647 kb on - strand, within MPMX20_02594at 2732.737 kb on - strand, within MPMX20_02594at 2732.742 kb on - strand, within MPMX20_02594at 2732.794 kb on + strand, within MPMX20_02594at 2732.841 kb on + strand, within MPMX20_02594at 2732.866 kb on + strand, within MPMX20_02594at 2732.882 kb on - strand, within MPMX20_02594at 2732.937 kb on + strand, within MPMX20_02594at 2732.937 kb on + strand, within MPMX20_02594at 2732.937 kb on + strand, within MPMX20_02594at 2732.945 kb on - strand, within MPMX20_02594at 2732.945 kb on - strand, within MPMX20_02594at 2732.945 kb on - strand, within MPMX20_02594at 2732.945 kb on - strand, within MPMX20_02594at 2732.945 kb on - strand, within MPMX20_02594at 2732.945 kb on - strand, within MPMX20_02594at 2732.945 kb on - strand, within MPMX20_02594at 2732.956 kb on - strand, within MPMX20_02594at 2732.988 kb on - strand, within MPMX20_02594at 2733.014 kb on - strand, within MPMX20_02594at 2733.033 kb on - strand, within MPMX20_02594at 2733.046 kb on - strand, within MPMX20_02594at 2733.147 kb on - strand, within MPMX20_02594at 2733.149 kb on + strand, within MPMX20_02594at 2733.157 kb on - strand, within MPMX20_02594at 2733.173 kb on + strand, within MPMX20_02594at 2733.173 kb on + strand, within MPMX20_02594at 2733.181 kb on - strand, within MPMX20_02594at 2733.181 kb on - strand, within MPMX20_02594at 2733.198 kb on - strand, within MPMX20_02594at 2733.205 kb on + strand, within MPMX20_02594at 2733.239 kb on + strandat 2733.239 kb on + strandat 2733.247 kb on - strandat 2733.258 kb on - strandat 2733.281 kb on - strandat 2733.281 kb on - strandat 2733.290 kb on - strandat 2733.295 kb on - strandat 2733.297 kb on + strandat 2733.297 kb on + strandat 2733.305 kb on - strandat 2733.305 kb on - strandat 2733.321 kb on - strandat 2733.329 kb on + strandat 2733.342 kb on + strandat 2733.353 kb on + strandat 2733.361 kb on - strandat 2733.420 kb on - strand, within MPMX20_02595at 2733.420 kb on - strand, within MPMX20_02595at 2733.424 kb on + strand, within MPMX20_02595at 2733.444 kb on - strand, within MPMX20_02595at 2733.478 kb on + strand, within MPMX20_02595at 2733.483 kb on + strand, within MPMX20_02595at 2733.486 kb on - strand, within MPMX20_02595at 2733.491 kb on - strand, within MPMX20_02595at 2733.497 kb on + strand, within MPMX20_02595at 2733.500 kb on - strand, within MPMX20_02595at 2733.507 kb on - strand, within MPMX20_02595at 2733.507 kb on - strand, within MPMX20_02595at 2733.515 kb on - strand, within MPMX20_02595at 2733.522 kb on - strand, within MPMX20_02595at 2733.550 kb on + strand, within MPMX20_02595at 2733.603 kb on - strand, within MPMX20_02595at 2733.629 kb on - strand, within MPMX20_02595at 2733.633 kb on + strand, within MPMX20_02595at 2733.633 kb on + strand, within MPMX20_02595at 2733.633 kb on + strand, within MPMX20_02595at 2733.633 kb on + strand, within MPMX20_02595at 2733.633 kb on + strand, within MPMX20_02595at 2733.635 kb on - strand, within MPMX20_02595at 2733.641 kb on - strand, within MPMX20_02595at 2733.641 kb on - strand, within MPMX20_02595at 2733.641 kb on - strand, within MPMX20_02595at 2733.641 kb on - strand, within MPMX20_02595at 2733.641 kb on - strand, within MPMX20_02595at 2733.671 kb on + strand, within MPMX20_02595at 2733.671 kb on + strand, within MPMX20_02595at 2733.671 kb on + strand, within MPMX20_02595at 2733.671 kb on + strand, within MPMX20_02595at 2733.677 kb on + strand, within MPMX20_02595at 2733.677 kb on + strand, within MPMX20_02595at 2733.679 kb on - strand, within MPMX20_02595at 2733.679 kb on - strand, within MPMX20_02595at 2733.712 kb on + strand, within MPMX20_02595at 2733.712 kb on + strand, within MPMX20_02595at 2733.712 kb on + strand, within MPMX20_02595at 2733.718 kb on + strand, within MPMX20_02595at 2733.726 kb on - strand, within MPMX20_02595at 2733.788 kb on + strand, within MPMX20_02595at 2733.811 kb on + strandat 2733.817 kb on + strandat 2733.819 kb on - strandat 2733.880 kb on - strandat 2733.927 kb on + strandat 2733.927 kb on + strandat 2733.933 kb on - strandat 2733.943 kb on + strandat 2733.951 kb on - strandat 2733.951 kb on - strandat 2733.996 kb on + strand, within MPMX20_02596at 2734.004 kb on + strand, within MPMX20_02596at 2734.036 kb on + strand, within MPMX20_02596at 2734.039 kb on - strand, within MPMX20_02596at 2734.061 kb on - strand, within MPMX20_02596at 2734.070 kb on + strand, within MPMX20_02596at 2734.089 kb on + strand, within MPMX20_02596at 2734.123 kb on + strand, within MPMX20_02596at 2734.123 kb on + strand, within MPMX20_02596at 2734.131 kb on - strand, within MPMX20_02596at 2734.131 kb on - strand, within MPMX20_02596at 2734.132 kb on - strand, within MPMX20_02596at 2734.157 kb on + strand, within MPMX20_02596at 2734.200 kb on + strand, within MPMX20_02596at 2734.200 kb on + strand, within MPMX20_02596at 2734.219 kb on - strand, within MPMX20_02596at 2734.244 kb on + strand, within MPMX20_02596at 2734.299 kb on - strand, within MPMX20_02596at 2734.299 kb on - strand, within MPMX20_02596at 2734.329 kb on - strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.334 kb on + strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.342 kb on - strand, within MPMX20_02596at 2734.366 kb on + strand, within MPMX20_02596at 2734.432 kb on - strand, within MPMX20_02596at 2734.432 kb on - strand, within MPMX20_02596at 2734.493 kb on + strand, within MPMX20_02596at 2734.511 kb on - strand, within MPMX20_02596at 2734.525 kb on - strand, within MPMX20_02596at 2734.622 kb on + strand, within MPMX20_02596at 2734.630 kb on - strand, within MPMX20_02596at 2734.630 kb on - strand, within MPMX20_02596at 2734.635 kb on - strand, within MPMX20_02596at 2734.684 kb on - strandat 2734.686 kb on + strandat 2734.686 kb on + strandat 2734.686 kb on + strandat 2734.698 kb on + strandat 2734.778 kb on + strandat 2734.785 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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2,732,414 - +0.5
2,732,427 - +0.0
2,732,447 - +1.6
2,732,482 - MPMX20_02594 0.10 -0.4
2,732,502 + MPMX20_02594 0.12 +1.0
2,732,502 + MPMX20_02594 0.12 +0.2
2,732,539 - MPMX20_02594 0.16 +3.6
2,732,558 - MPMX20_02594 0.18 -0.8
2,732,572 - MPMX20_02594 0.20 -0.9
2,732,583 - MPMX20_02594 0.21 -0.1
2,732,639 + MPMX20_02594 0.27 -0.4
2,732,647 - MPMX20_02594 0.28 +2.2
2,732,737 - MPMX20_02594 0.37 -1.3
2,732,742 - MPMX20_02594 0.38 -0.2
2,732,794 + MPMX20_02594 0.43 -1.6
2,732,841 + MPMX20_02594 0.48 -1.0
2,732,866 + MPMX20_02594 0.51 +0.3
2,732,882 - MPMX20_02594 0.53 +4.4
2,732,937 + MPMX20_02594 0.58 +0.3
2,732,937 + MPMX20_02594 0.58 -2.0
2,732,937 + MPMX20_02594 0.58 -0.7
2,732,945 - MPMX20_02594 0.59 -1.7
2,732,945 - MPMX20_02594 0.59 +0.3
2,732,945 - MPMX20_02594 0.59 -2.5
2,732,945 - MPMX20_02594 0.59 +0.8
2,732,945 - MPMX20_02594 0.59 +0.3
2,732,945 - MPMX20_02594 0.59 -2.6
2,732,945 - MPMX20_02594 0.59 -0.8
2,732,956 - MPMX20_02594 0.60 +2.6
2,732,988 - MPMX20_02594 0.64 +0.6
2,733,014 - MPMX20_02594 0.67 -1.1
2,733,033 - MPMX20_02594 0.69 -1.2
2,733,046 - MPMX20_02594 0.70 -1.6
2,733,147 - MPMX20_02594 0.81 -0.4
2,733,149 + MPMX20_02594 0.81 -0.8
2,733,157 - MPMX20_02594 0.82 -0.5
2,733,173 + MPMX20_02594 0.83 +1.6
2,733,173 + MPMX20_02594 0.83 +0.3
2,733,181 - MPMX20_02594 0.84 +2.3
2,733,181 - MPMX20_02594 0.84 -0.9
2,733,198 - MPMX20_02594 0.86 +0.4
2,733,205 + MPMX20_02594 0.87 -1.4
2,733,239 + -0.2
2,733,239 + +1.2
2,733,247 - +1.0
2,733,258 - +0.3
2,733,281 - -0.4
2,733,281 - +2.4
2,733,290 - +0.0
2,733,295 - +0.0
2,733,297 + +0.0
2,733,297 + -0.8
2,733,305 - -1.3
2,733,305 - +1.0
2,733,321 - -0.2
2,733,329 + +0.3
2,733,342 + +0.3
2,733,353 + -0.4
2,733,361 - -0.8
2,733,420 - MPMX20_02595 0.14 +0.3
2,733,420 - MPMX20_02595 0.14 -0.8
2,733,424 + MPMX20_02595 0.14 +0.7
2,733,444 - MPMX20_02595 0.18 -1.2
2,733,478 + MPMX20_02595 0.25 -0.5
2,733,483 + MPMX20_02595 0.26 -0.7
2,733,486 - MPMX20_02595 0.27 -0.7
2,733,491 - MPMX20_02595 0.27 -2.2
2,733,497 + MPMX20_02595 0.29 -0.2
2,733,500 - MPMX20_02595 0.29 -2.1
2,733,507 - MPMX20_02595 0.31 -0.5
2,733,507 - MPMX20_02595 0.31 -0.7
2,733,515 - MPMX20_02595 0.32 -2.5
2,733,522 - MPMX20_02595 0.34 -1.8
2,733,550 + MPMX20_02595 0.39 +0.0
2,733,603 - MPMX20_02595 0.49 +0.3
2,733,629 - MPMX20_02595 0.54 -1.5
2,733,633 + MPMX20_02595 0.55 -1.1
2,733,633 + MPMX20_02595 0.55 -0.4
2,733,633 + MPMX20_02595 0.55 -1.1
2,733,633 + MPMX20_02595 0.55 -0.5
2,733,633 + MPMX20_02595 0.55 -1.4
2,733,635 - MPMX20_02595 0.56 -0.2
2,733,641 - MPMX20_02595 0.57 +0.3
2,733,641 - MPMX20_02595 0.57 +0.6
2,733,641 - MPMX20_02595 0.57 +0.4
2,733,641 - MPMX20_02595 0.57 -0.2
2,733,641 - MPMX20_02595 0.57 -0.4
2,733,671 + MPMX20_02595 0.63 +0.0
2,733,671 + MPMX20_02595 0.63 -0.9
2,733,671 + MPMX20_02595 0.63 -0.8
2,733,671 + MPMX20_02595 0.63 -0.6
2,733,677 + MPMX20_02595 0.64 -1.7
2,733,677 + MPMX20_02595 0.64 -0.7
2,733,679 - MPMX20_02595 0.64 -1.6
2,733,679 - MPMX20_02595 0.64 -1.6
2,733,712 + MPMX20_02595 0.71 -1.5
2,733,712 + MPMX20_02595 0.71 -1.4
2,733,712 + MPMX20_02595 0.71 +0.2
2,733,718 + MPMX20_02595 0.72 -2.3
2,733,726 - MPMX20_02595 0.73 +0.3
2,733,788 + MPMX20_02595 0.85 -0.7
2,733,811 + -1.5
2,733,817 + +0.3
2,733,819 - +1.6
2,733,880 - -0.3
2,733,927 + -0.2
2,733,927 + +0.5
2,733,933 - -1.6
2,733,943 + -1.8
2,733,951 - +0.3
2,733,951 - +0.0
2,733,996 + MPMX20_02596 0.10 +1.6
2,734,004 + MPMX20_02596 0.11 -1.1
2,734,036 + MPMX20_02596 0.15 -0.3
2,734,039 - MPMX20_02596 0.15 -0.8
2,734,061 - MPMX20_02596 0.18 +0.8
2,734,070 + MPMX20_02596 0.19 -0.5
2,734,089 + MPMX20_02596 0.21 +0.2
2,734,123 + MPMX20_02596 0.25 +0.6
2,734,123 + MPMX20_02596 0.25 -1.4
2,734,131 - MPMX20_02596 0.26 +2.1
2,734,131 - MPMX20_02596 0.26 -1.2
2,734,132 - MPMX20_02596 0.26 +3.2
2,734,157 + MPMX20_02596 0.29 -0.8
2,734,200 + MPMX20_02596 0.34 -2.0
2,734,200 + MPMX20_02596 0.34 +0.3
2,734,219 - MPMX20_02596 0.37 -0.4
2,734,244 + MPMX20_02596 0.40 +0.1
2,734,299 - MPMX20_02596 0.46 -0.4
2,734,299 - MPMX20_02596 0.46 +0.3
2,734,329 - MPMX20_02596 0.50 +0.8
2,734,334 + MPMX20_02596 0.50 -0.9
2,734,334 + MPMX20_02596 0.50 -0.2
2,734,334 + MPMX20_02596 0.50 +0.5
2,734,334 + MPMX20_02596 0.50 +0.3
2,734,334 + MPMX20_02596 0.50 +0.8
2,734,334 + MPMX20_02596 0.50 -0.6
2,734,342 - MPMX20_02596 0.51 -0.4
2,734,342 - MPMX20_02596 0.51 -0.5
2,734,342 - MPMX20_02596 0.51 +0.1
2,734,342 - MPMX20_02596 0.51 -2.6
2,734,342 - MPMX20_02596 0.51 +0.4
2,734,342 - MPMX20_02596 0.51 -0.1
2,734,342 - MPMX20_02596 0.51 -1.3
2,734,342 - MPMX20_02596 0.51 -1.1
2,734,342 - MPMX20_02596 0.51 +0.1
2,734,342 - MPMX20_02596 0.51 -0.1
2,734,366 + MPMX20_02596 0.54 +0.2
2,734,432 - MPMX20_02596 0.62 +0.7
2,734,432 - MPMX20_02596 0.62 -0.2
2,734,493 + MPMX20_02596 0.69 -1.0
2,734,511 - MPMX20_02596 0.71 +0.3
2,734,525 - MPMX20_02596 0.73 -0.2
2,734,622 + MPMX20_02596 0.84 -0.7
2,734,630 - MPMX20_02596 0.85 -1.3
2,734,630 - MPMX20_02596 0.85 -2.3
2,734,635 - MPMX20_02596 0.86 -2.4
2,734,684 - -2.7
2,734,686 + +1.1
2,734,686 + -0.7
2,734,686 + +0.5
2,734,698 + +0.1
2,734,778 + -0.4
2,734,785 + +2.1

Or see this region's nucleotide sequence