Experiment: TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01149 and MPMX20_01150 are separated by 44 nucleotides MPMX20_01150 and MPMX20_01151 are separated by 70 nucleotides MPMX20_01151 and MPMX20_01152 are separated by 103 nucleotides
MPMX20_01149: MPMX20_01149 - Potassium binding protein Kbp, at 1,211,662 to 1,212,111
_01149
MPMX20_01150: MPMX20_01150 - hypothetical protein, at 1,212,156 to 1,212,551
_01150
MPMX20_01151: MPMX20_01151 - HTH-type transcriptional activator RhaS, at 1,212,622 to 1,213,542
_01151
MPMX20_01152: MPMX20_01152 - 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase, at 1,213,646 to 1,214,479
_01152
Position (kb)
1212
1213
1214 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1211.634 kb on + strand at 1211.729 kb on + strand, within MPMX20_01149 at 1211.768 kb on + strand, within MPMX20_01149 at 1211.768 kb on + strand, within MPMX20_01149 at 1211.768 kb on + strand, within MPMX20_01149 at 1211.768 kb on + strand, within MPMX20_01149 at 1211.768 kb on + strand, within MPMX20_01149 at 1211.768 kb on + strand, within MPMX20_01149 at 1211.776 kb on - strand, within MPMX20_01149 at 1211.776 kb on - strand, within MPMX20_01149 at 1211.776 kb on - strand, within MPMX20_01149 at 1211.776 kb on - strand, within MPMX20_01149 at 1211.793 kb on + strand, within MPMX20_01149 at 1211.897 kb on + strand, within MPMX20_01149 at 1211.908 kb on + strand, within MPMX20_01149 at 1211.938 kb on - strand, within MPMX20_01149 at 1211.952 kb on + strand, within MPMX20_01149 at 1211.972 kb on + strand, within MPMX20_01149 at 1211.980 kb on - strand, within MPMX20_01149 at 1212.001 kb on + strand, within MPMX20_01149 at 1212.011 kb on - strand, within MPMX20_01149 at 1212.127 kb on - strand at 1212.218 kb on - strand, within MPMX20_01150 at 1212.225 kb on + strand, within MPMX20_01150 at 1212.331 kb on - strand, within MPMX20_01150 at 1212.353 kb on + strand, within MPMX20_01150 at 1212.353 kb on + strand, within MPMX20_01150 at 1212.371 kb on - strand, within MPMX20_01150 at 1212.421 kb on - strand, within MPMX20_01150 at 1212.474 kb on - strand, within MPMX20_01150 at 1212.474 kb on - strand, within MPMX20_01150 at 1212.482 kb on - strand, within MPMX20_01150 at 1212.487 kb on + strand, within MPMX20_01150 at 1212.489 kb on - strand, within MPMX20_01150 at 1212.509 kb on - strand, within MPMX20_01150 at 1212.539 kb on + strand at 1212.539 kb on + strand at 1212.541 kb on - strand at 1212.566 kb on - strand at 1212.578 kb on + strand at 1212.578 kb on + strand at 1212.578 kb on + strand at 1212.578 kb on + strand at 1212.586 kb on - strand at 1212.586 kb on - strand at 1212.591 kb on - strand at 1212.591 kb on - strand at 1212.593 kb on + strand at 1212.596 kb on - strand at 1212.600 kb on + strand at 1212.600 kb on + strand at 1212.600 kb on + strand at 1212.603 kb on - strand at 1212.608 kb on - strand at 1212.608 kb on - strand at 1212.619 kb on + strand at 1212.619 kb on + strand at 1212.621 kb on - strand at 1212.621 kb on - strand at 1212.713 kb on + strand at 1212.734 kb on + strand, within MPMX20_01151 at 1212.858 kb on + strand, within MPMX20_01151 at 1212.858 kb on + strand, within MPMX20_01151 at 1212.858 kb on + strand, within MPMX20_01151 at 1212.858 kb on + strand, within MPMX20_01151 at 1212.882 kb on + strand, within MPMX20_01151 at 1212.996 kb on + strand, within MPMX20_01151 at 1213.025 kb on + strand, within MPMX20_01151 at 1213.033 kb on - strand, within MPMX20_01151 at 1213.033 kb on - strand, within MPMX20_01151 at 1213.033 kb on - strand, within MPMX20_01151 at 1213.116 kb on - strand, within MPMX20_01151 at 1213.116 kb on - strand, within MPMX20_01151 at 1213.194 kb on + strand, within MPMX20_01151 at 1213.194 kb on + strand, within MPMX20_01151 at 1213.202 kb on - strand, within MPMX20_01151 at 1213.207 kb on + strand, within MPMX20_01151 at 1213.488 kb on + strand at 1213.489 kb on + strand at 1213.497 kb on - strand at 1213.506 kb on - strand at 1213.601 kb on + strand at 1213.614 kb on - strand at 1213.637 kb on - strand at 1213.713 kb on - strand at 1213.828 kb on - strand, within MPMX20_01152 at 1213.854 kb on + strand, within MPMX20_01152 at 1213.862 kb on - strand, within MPMX20_01152 at 1213.889 kb on + strand, within MPMX20_01152 at 1213.899 kb on + strand, within MPMX20_01152 at 1213.923 kb on + strand, within MPMX20_01152 at 1213.946 kb on + strand, within MPMX20_01152 at 1213.946 kb on + strand, within MPMX20_01152 at 1213.993 kb on + strand, within MPMX20_01152 at 1213.995 kb on - strand, within MPMX20_01152 at 1214.001 kb on - strand, within MPMX20_01152 at 1214.001 kb on - strand, within MPMX20_01152 at 1214.001 kb on - strand, within MPMX20_01152 at 1214.013 kb on - strand, within MPMX20_01152 at 1214.063 kb on - strand, within MPMX20_01152 at 1214.135 kb on - strand, within MPMX20_01152 at 1214.168 kb on - strand, within MPMX20_01152 at 1214.416 kb on - strand at 1214.461 kb on - strand at 1214.468 kb on + strand at 1214.521 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 1,211,634 + -1.3 1,211,729 + MPMX20_01149 0.15 -1.1 1,211,768 + MPMX20_01149 0.24 -1.0 1,211,768 + MPMX20_01149 0.24 -0.7 1,211,768 + MPMX20_01149 0.24 -1.7 1,211,768 + MPMX20_01149 0.24 -3.2 1,211,768 + MPMX20_01149 0.24 -1.4 1,211,768 + MPMX20_01149 0.24 -0.4 1,211,776 - MPMX20_01149 0.25 -0.2 1,211,776 - MPMX20_01149 0.25 +0.2 1,211,776 - MPMX20_01149 0.25 -2.1 1,211,776 - MPMX20_01149 0.25 -1.4 1,211,793 + MPMX20_01149 0.29 +0.2 1,211,897 + MPMX20_01149 0.52 -0.3 1,211,908 + MPMX20_01149 0.55 -0.2 1,211,938 - MPMX20_01149 0.61 +1.2 1,211,952 + MPMX20_01149 0.64 -1.5 1,211,972 + MPMX20_01149 0.69 -1.5 1,211,980 - MPMX20_01149 0.71 -1.8 1,212,001 + MPMX20_01149 0.75 +0.2 1,212,011 - MPMX20_01149 0.78 -3.2 1,212,127 - -0.4 1,212,218 - MPMX20_01150 0.16 -0.4 1,212,225 + MPMX20_01150 0.17 -1.1 1,212,331 - MPMX20_01150 0.44 +1.6 1,212,353 + MPMX20_01150 0.50 +0.2 1,212,353 + MPMX20_01150 0.50 -2.7 1,212,371 - MPMX20_01150 0.54 -0.8 1,212,421 - MPMX20_01150 0.67 -1.2 1,212,474 - MPMX20_01150 0.80 -2.4 1,212,474 - MPMX20_01150 0.80 -1.3 1,212,482 - MPMX20_01150 0.82 -1.3 1,212,487 + MPMX20_01150 0.84 -1.3 1,212,489 - MPMX20_01150 0.84 -0.2 1,212,509 - MPMX20_01150 0.89 +3.6 1,212,539 + -1.5 1,212,539 + -1.1 1,212,541 - -1.0 1,212,566 - -1.6 1,212,578 + -0.7 1,212,578 + -0.2 1,212,578 + +0.4 1,212,578 + +0.8 1,212,586 - -2.0 1,212,586 - -1.4 1,212,591 - -1.8 1,212,591 - +0.6 1,212,593 + +1.6 1,212,596 - -2.0 1,212,600 + -1.6 1,212,600 + +0.8 1,212,600 + +0.3 1,212,603 - -0.8 1,212,608 - -0.4 1,212,608 - -0.9 1,212,619 + +0.8 1,212,619 + -1.7 1,212,621 - -0.2 1,212,621 - -0.5 1,212,713 + +0.2 1,212,734 + MPMX20_01151 0.12 -1.1 1,212,858 + MPMX20_01151 0.26 +0.8 1,212,858 + MPMX20_01151 0.26 -2.6 1,212,858 + MPMX20_01151 0.26 -0.2 1,212,858 + MPMX20_01151 0.26 +1.2 1,212,882 + MPMX20_01151 0.28 -0.1 1,212,996 + MPMX20_01151 0.41 +0.2 1,213,025 + MPMX20_01151 0.44 -0.4 1,213,033 - MPMX20_01151 0.45 +5.4 1,213,033 - MPMX20_01151 0.45 +0.3 1,213,033 - MPMX20_01151 0.45 -1.7 1,213,116 - MPMX20_01151 0.54 +1.0 1,213,116 - MPMX20_01151 0.54 -0.4 1,213,194 + MPMX20_01151 0.62 -1.3 1,213,194 + MPMX20_01151 0.62 -0.3 1,213,202 - MPMX20_01151 0.63 +0.6 1,213,207 + MPMX20_01151 0.64 +2.6 1,213,488 + -2.0 1,213,489 + -2.4 1,213,497 - -0.1 1,213,506 - -0.4 1,213,601 + -0.9 1,213,614 - -1.3 1,213,637 - -0.3 1,213,713 - -0.7 1,213,828 - MPMX20_01152 0.22 -0.1 1,213,854 + MPMX20_01152 0.25 +0.3 1,213,862 - MPMX20_01152 0.26 -2.2 1,213,889 + MPMX20_01152 0.29 -1.1 1,213,899 + MPMX20_01152 0.30 -2.0 1,213,923 + MPMX20_01152 0.33 -0.4 1,213,946 + MPMX20_01152 0.36 -1.1 1,213,946 + MPMX20_01152 0.36 +0.2 1,213,993 + MPMX20_01152 0.42 -0.6 1,213,995 - MPMX20_01152 0.42 -0.4 1,214,001 - MPMX20_01152 0.43 -1.2 1,214,001 - MPMX20_01152 0.43 +0.4 1,214,001 - MPMX20_01152 0.43 +2.3 1,214,013 - MPMX20_01152 0.44 -1.0 1,214,063 - MPMX20_01152 0.50 +1.6 1,214,135 - MPMX20_01152 0.59 -0.3 1,214,168 - MPMX20_01152 0.63 +0.2 1,214,416 - +1.0 1,214,461 - +1.0 1,214,468 + +1.5 1,214,521 + -0.0
Or see this region's nucleotide sequence