Experiment: M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04609 and MPMX20_04610 are separated by 194 nucleotides MPMX20_04610 and MPMX20_04611 are separated by 86 nucleotides MPMX20_04611 and MPMX20_04612 are separated by 456 nucleotides
MPMX20_04609: MPMX20_04609 - 23S ribosomal RNA, at 4,824,698 to 4,827,601
_04609
MPMX20_04610: MPMX20_04610 - tRNA-Glu, at 4,827,796 to 4,827,871
_04610
MPMX20_04611: MPMX20_04611 - 16S ribosomal RNA, at 4,827,958 to 4,829,493
_04611
MPMX20_04612: MPMX20_04612 - HTH-type transcriptional repressor NanR, at 4,829,950 to 4,830,657
_04612
Position (kb)
4827
4828
4829
4830 Strain fitness (log2 ratio)
-2
-1
0
1 at 4829.842 kb on + strand at 4829.895 kb on + strand at 4829.971 kb on - strand at 4830.046 kb on - strand, within MPMX20_04612 at 4830.051 kb on - strand, within MPMX20_04612 at 4830.072 kb on + strand, within MPMX20_04612 at 4830.080 kb on - strand, within MPMX20_04612 at 4830.087 kb on + strand, within MPMX20_04612 at 4830.209 kb on + strand, within MPMX20_04612 at 4830.287 kb on + strand, within MPMX20_04612 at 4830.329 kb on - strand, within MPMX20_04612 at 4830.356 kb on - strand, within MPMX20_04612 at 4830.407 kb on + strand, within MPMX20_04612 at 4830.407 kb on + strand, within MPMX20_04612 at 4830.422 kb on - strand, within MPMX20_04612 at 4830.428 kb on + strand, within MPMX20_04612 at 4830.428 kb on + strand, within MPMX20_04612 at 4830.431 kb on - strand, within MPMX20_04612 at 4830.431 kb on - strand, within MPMX20_04612 at 4830.436 kb on - strand, within MPMX20_04612 at 4830.436 kb on - strand, within MPMX20_04612 at 4830.436 kb on - strand, within MPMX20_04612 at 4830.436 kb on - strand, within MPMX20_04612 at 4830.438 kb on + strand, within MPMX20_04612 at 4830.438 kb on + strand, within MPMX20_04612 at 4830.446 kb on - strand, within MPMX20_04612 at 4830.452 kb on + strand, within MPMX20_04612 at 4830.452 kb on + strand, within MPMX20_04612
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 4,829,842 + -1.3 4,829,895 + +0.3 4,829,971 - -1.1 4,830,046 - MPMX20_04612 0.14 -0.7 4,830,051 - MPMX20_04612 0.14 -2.6 4,830,072 + MPMX20_04612 0.17 +0.0 4,830,080 - MPMX20_04612 0.18 +0.4 4,830,087 + MPMX20_04612 0.19 +0.9 4,830,209 + MPMX20_04612 0.37 +0.6 4,830,287 + MPMX20_04612 0.48 +1.3 4,830,329 - MPMX20_04612 0.54 +0.0 4,830,356 - MPMX20_04612 0.57 +0.8 4,830,407 + MPMX20_04612 0.65 -0.3 4,830,407 + MPMX20_04612 0.65 +0.3 4,830,422 - MPMX20_04612 0.67 -0.2 4,830,428 + MPMX20_04612 0.68 -2.5 4,830,428 + MPMX20_04612 0.68 +1.2 4,830,431 - MPMX20_04612 0.68 -1.0 4,830,431 - MPMX20_04612 0.68 +0.8 4,830,436 - MPMX20_04612 0.69 -0.4 4,830,436 - MPMX20_04612 0.69 -0.0 4,830,436 - MPMX20_04612 0.69 -1.1 4,830,436 - MPMX20_04612 0.69 +0.3 4,830,438 + MPMX20_04612 0.69 +0.3 4,830,438 + MPMX20_04612 0.69 +0.7 4,830,446 - MPMX20_04612 0.70 +0.3 4,830,452 + MPMX20_04612 0.71 +1.6 4,830,452 + MPMX20_04612 0.71 +0.5
Or see this region's nucleotide sequence