Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04611

Experiment: M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04609 and MPMX20_04610 are separated by 194 nucleotidesMPMX20_04610 and MPMX20_04611 are separated by 86 nucleotidesMPMX20_04611 and MPMX20_04612 are separated by 456 nucleotides MPMX20_04609: MPMX20_04609 - 23S ribosomal RNA, at 4,824,698 to 4,827,601 _04609 MPMX20_04610: MPMX20_04610 - tRNA-Glu, at 4,827,796 to 4,827,871 _04610 MPMX20_04611: MPMX20_04611 - 16S ribosomal RNA, at 4,827,958 to 4,829,493 _04611 MPMX20_04612: MPMX20_04612 - HTH-type transcriptional repressor NanR, at 4,829,950 to 4,830,657 _04612 Position (kb) 4827 4828 4829 4830Strain fitness (log2 ratio) -2 -1 0 1at 4829.842 kb on + strandat 4829.895 kb on + strandat 4829.971 kb on - strandat 4830.046 kb on - strand, within MPMX20_04612at 4830.051 kb on - strand, within MPMX20_04612at 4830.072 kb on + strand, within MPMX20_04612at 4830.080 kb on - strand, within MPMX20_04612at 4830.087 kb on + strand, within MPMX20_04612at 4830.209 kb on + strand, within MPMX20_04612at 4830.287 kb on + strand, within MPMX20_04612at 4830.329 kb on - strand, within MPMX20_04612at 4830.356 kb on - strand, within MPMX20_04612at 4830.407 kb on + strand, within MPMX20_04612at 4830.407 kb on + strand, within MPMX20_04612at 4830.422 kb on - strand, within MPMX20_04612at 4830.428 kb on + strand, within MPMX20_04612at 4830.428 kb on + strand, within MPMX20_04612at 4830.431 kb on - strand, within MPMX20_04612at 4830.431 kb on - strand, within MPMX20_04612at 4830.436 kb on - strand, within MPMX20_04612at 4830.436 kb on - strand, within MPMX20_04612at 4830.436 kb on - strand, within MPMX20_04612at 4830.436 kb on - strand, within MPMX20_04612at 4830.438 kb on + strand, within MPMX20_04612at 4830.438 kb on + strand, within MPMX20_04612at 4830.446 kb on - strand, within MPMX20_04612at 4830.452 kb on + strand, within MPMX20_04612at 4830.452 kb on + strand, within MPMX20_04612

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
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4,829,842 + -1.3
4,829,895 + +0.3
4,829,971 - -1.1
4,830,046 - MPMX20_04612 0.14 -0.7
4,830,051 - MPMX20_04612 0.14 -2.6
4,830,072 + MPMX20_04612 0.17 +0.0
4,830,080 - MPMX20_04612 0.18 +0.4
4,830,087 + MPMX20_04612 0.19 +0.9
4,830,209 + MPMX20_04612 0.37 +0.6
4,830,287 + MPMX20_04612 0.48 +1.3
4,830,329 - MPMX20_04612 0.54 +0.0
4,830,356 - MPMX20_04612 0.57 +0.8
4,830,407 + MPMX20_04612 0.65 -0.3
4,830,407 + MPMX20_04612 0.65 +0.3
4,830,422 - MPMX20_04612 0.67 -0.2
4,830,428 + MPMX20_04612 0.68 -2.5
4,830,428 + MPMX20_04612 0.68 +1.2
4,830,431 - MPMX20_04612 0.68 -1.0
4,830,431 - MPMX20_04612 0.68 +0.8
4,830,436 - MPMX20_04612 0.69 -0.4
4,830,436 - MPMX20_04612 0.69 -0.0
4,830,436 - MPMX20_04612 0.69 -1.1
4,830,436 - MPMX20_04612 0.69 +0.3
4,830,438 + MPMX20_04612 0.69 +0.3
4,830,438 + MPMX20_04612 0.69 +0.7
4,830,446 - MPMX20_04612 0.70 +0.3
4,830,452 + MPMX20_04612 0.71 +1.6
4,830,452 + MPMX20_04612 0.71 +0.5

Or see this region's nucleotide sequence