Experiment: M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03345 and MPMX20_03346 overlap by 4 nucleotides MPMX20_03346 and MPMX20_03347 are separated by 145 nucleotides MPMX20_03347 and MPMX20_03348 are separated by 3 nucleotides MPMX20_03348 and MPMX20_03349 overlap by 1 nucleotides
MPMX20_03345: MPMX20_03345 - putative protein YfgD, at 3,518,698 to 3,519,054
_03345
MPMX20_03346: MPMX20_03346 - hypothetical protein, at 3,519,051 to 3,519,875
_03346
MPMX20_03347: MPMX20_03347 - Lichenan permease IIC component, at 3,520,021 to 3,521,340
_03347
MPMX20_03348: MPMX20_03348 - N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase, at 3,521,344 to 3,522,300
_03348
MPMX20_03349: MPMX20_03349 - cytosol aminopeptidase, at 3,522,300 to 3,523,721
_03349
Position (kb)
3520
3521
3522 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 3519.048 kb on + strand at 3519.049 kb on + strand at 3519.180 kb on - strand, within MPMX20_03346 at 3519.213 kb on - strand, within MPMX20_03346 at 3519.220 kb on + strand, within MPMX20_03346 at 3519.327 kb on - strand, within MPMX20_03346 at 3519.375 kb on + strand, within MPMX20_03346 at 3519.375 kb on + strand, within MPMX20_03346 at 3519.396 kb on + strand, within MPMX20_03346 at 3519.594 kb on + strand, within MPMX20_03346 at 3519.646 kb on + strand, within MPMX20_03346 at 3519.656 kb on + strand, within MPMX20_03346 at 3519.779 kb on + strand, within MPMX20_03346 at 3519.815 kb on + strand at 3519.844 kb on + strand at 3520.023 kb on + strand at 3520.131 kb on + strand at 3520.194 kb on + strand, within MPMX20_03347 at 3520.257 kb on + strand, within MPMX20_03347 at 3520.257 kb on + strand, within MPMX20_03347 at 3520.257 kb on + strand, within MPMX20_03347 at 3520.273 kb on - strand, within MPMX20_03347 at 3520.275 kb on + strand, within MPMX20_03347 at 3520.295 kb on + strand, within MPMX20_03347 at 3520.306 kb on + strand, within MPMX20_03347 at 3520.306 kb on + strand, within MPMX20_03347 at 3520.314 kb on - strand, within MPMX20_03347 at 3520.375 kb on + strand, within MPMX20_03347 at 3520.436 kb on + strand, within MPMX20_03347 at 3520.441 kb on + strand, within MPMX20_03347 at 3520.444 kb on - strand, within MPMX20_03347 at 3520.444 kb on - strand, within MPMX20_03347 at 3520.470 kb on + strand, within MPMX20_03347 at 3520.478 kb on - strand, within MPMX20_03347 at 3520.524 kb on + strand, within MPMX20_03347 at 3520.569 kb on + strand, within MPMX20_03347 at 3520.569 kb on + strand, within MPMX20_03347 at 3520.579 kb on - strand, within MPMX20_03347 at 3520.632 kb on + strand, within MPMX20_03347 at 3520.632 kb on + strand, within MPMX20_03347 at 3520.632 kb on + strand, within MPMX20_03347 at 3520.640 kb on - strand, within MPMX20_03347 at 3520.640 kb on - strand, within MPMX20_03347 at 3520.640 kb on - strand, within MPMX20_03347 at 3520.640 kb on - strand, within MPMX20_03347 at 3520.640 kb on - strand, within MPMX20_03347 at 3520.640 kb on - strand, within MPMX20_03347 at 3520.673 kb on - strand, within MPMX20_03347 at 3520.862 kb on - strand, within MPMX20_03347 at 3520.909 kb on - strand, within MPMX20_03347 at 3521.315 kb on + strand at 3521.394 kb on + strand at 3521.458 kb on + strand, within MPMX20_03348 at 3521.475 kb on + strand, within MPMX20_03348 at 3521.483 kb on - strand, within MPMX20_03348 at 3521.677 kb on - strand, within MPMX20_03348 at 3521.680 kb on + strand, within MPMX20_03348 at 3521.689 kb on - strand, within MPMX20_03348 at 3521.733 kb on + strand, within MPMX20_03348 at 3521.744 kb on + strand, within MPMX20_03348 at 3521.744 kb on + strand, within MPMX20_03348 at 3521.764 kb on + strand, within MPMX20_03348 at 3521.765 kb on + strand, within MPMX20_03348 at 3521.772 kb on - strand, within MPMX20_03348 at 3521.772 kb on - strand, within MPMX20_03348 at 3521.773 kb on - strand, within MPMX20_03348 at 3521.900 kb on + strand, within MPMX20_03348 at 3521.938 kb on + strand, within MPMX20_03348 at 3521.961 kb on - strand, within MPMX20_03348 at 3521.962 kb on - strand, within MPMX20_03348 at 3522.009 kb on + strand, within MPMX20_03348 at 3522.009 kb on + strand, within MPMX20_03348 at 3522.009 kb on + strand, within MPMX20_03348 at 3522.121 kb on + strand, within MPMX20_03348 at 3522.144 kb on + strand, within MPMX20_03348 at 3522.253 kb on + strand at 3522.253 kb on + strand at 3522.258 kb on + strand at 3522.258 kb on + strand at 3522.258 kb on + strand at 3522.266 kb on - strand at 3522.266 kb on - strand at 3522.286 kb on + strand at 3522.315 kb on - strand at 3522.315 kb on - strand at 3522.319 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, Mixed culture; Bacillus subtilis TBS_102 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct remove 3,519,048 + -1.1 3,519,049 + -2.5 3,519,180 - MPMX20_03346 0.16 +3.3 3,519,213 - MPMX20_03346 0.20 -1.3 3,519,220 + MPMX20_03346 0.20 -0.1 3,519,327 - MPMX20_03346 0.33 +0.4 3,519,375 + MPMX20_03346 0.39 +1.7 3,519,375 + MPMX20_03346 0.39 +0.5 3,519,396 + MPMX20_03346 0.42 -1.8 3,519,594 + MPMX20_03346 0.66 -0.4 3,519,646 + MPMX20_03346 0.72 -1.4 3,519,656 + MPMX20_03346 0.73 -0.6 3,519,779 + MPMX20_03346 0.88 +1.0 3,519,815 + -1.4 3,519,844 + -0.6 3,520,023 + +0.0 3,520,131 + -0.3 3,520,194 + MPMX20_03347 0.13 -2.0 3,520,257 + MPMX20_03347 0.18 +4.5 3,520,257 + MPMX20_03347 0.18 +2.0 3,520,257 + MPMX20_03347 0.18 +0.0 3,520,273 - MPMX20_03347 0.19 +1.7 3,520,275 + MPMX20_03347 0.19 -0.3 3,520,295 + MPMX20_03347 0.21 -2.1 3,520,306 + MPMX20_03347 0.22 -0.0 3,520,306 + MPMX20_03347 0.22 -0.1 3,520,314 - MPMX20_03347 0.22 +0.3 3,520,375 + MPMX20_03347 0.27 -0.4 3,520,436 + MPMX20_03347 0.31 -0.1 3,520,441 + MPMX20_03347 0.32 -0.1 3,520,444 - MPMX20_03347 0.32 +0.4 3,520,444 - MPMX20_03347 0.32 -1.0 3,520,470 + MPMX20_03347 0.34 +0.1 3,520,478 - MPMX20_03347 0.35 +1.7 3,520,524 + MPMX20_03347 0.38 -1.5 3,520,569 + MPMX20_03347 0.42 -0.1 3,520,569 + MPMX20_03347 0.42 +1.1 3,520,579 - MPMX20_03347 0.42 +1.6 3,520,632 + MPMX20_03347 0.46 -1.7 3,520,632 + MPMX20_03347 0.46 +2.7 3,520,632 + MPMX20_03347 0.46 -2.5 3,520,640 - MPMX20_03347 0.47 +0.8 3,520,640 - MPMX20_03347 0.47 +0.7 3,520,640 - MPMX20_03347 0.47 -1.1 3,520,640 - MPMX20_03347 0.47 -1.3 3,520,640 - MPMX20_03347 0.47 -1.4 3,520,640 - MPMX20_03347 0.47 +0.3 3,520,673 - MPMX20_03347 0.49 -1.0 3,520,862 - MPMX20_03347 0.64 -0.8 3,520,909 - MPMX20_03347 0.67 +1.3 3,521,315 + +0.2 3,521,394 + +5.9 3,521,458 + MPMX20_03348 0.12 +0.7 3,521,475 + MPMX20_03348 0.14 -0.6 3,521,483 - MPMX20_03348 0.15 -0.2 3,521,677 - MPMX20_03348 0.35 -1.0 3,521,680 + MPMX20_03348 0.35 +1.3 3,521,689 - MPMX20_03348 0.36 -0.1 3,521,733 + MPMX20_03348 0.41 -2.7 3,521,744 + MPMX20_03348 0.42 -0.1 3,521,744 + MPMX20_03348 0.42 -0.3 3,521,764 + MPMX20_03348 0.44 +0.7 3,521,765 + MPMX20_03348 0.44 +0.4 3,521,772 - MPMX20_03348 0.45 -1.4 3,521,772 - MPMX20_03348 0.45 -1.4 3,521,773 - MPMX20_03348 0.45 -0.1 3,521,900 + MPMX20_03348 0.58 -0.2 3,521,938 + MPMX20_03348 0.62 +1.7 3,521,961 - MPMX20_03348 0.64 -1.0 3,521,962 - MPMX20_03348 0.65 -0.1 3,522,009 + MPMX20_03348 0.69 +2.0 3,522,009 + MPMX20_03348 0.69 -1.2 3,522,009 + MPMX20_03348 0.69 +0.1 3,522,121 + MPMX20_03348 0.81 +0.7 3,522,144 + MPMX20_03348 0.84 +1.1 3,522,253 + +0.9 3,522,253 + +0.4 3,522,258 + +0.4 3,522,258 + -1.1 3,522,258 + +3.3 3,522,266 - -1.8 3,522,266 - -0.8 3,522,286 + -0.3 3,522,315 - -1.9 3,522,315 - -0.3 3,522,319 + -0.9
Or see this region's nucleotide sequence